RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 POLR3DP05423 398 aaPredicted RBP12.33□□□□□ -0.44
CPSF1P1-201ENST00000397477 IL15P40933 162 aaPredicted RBP12.33□□□□□ -0.44
CPSF1P1-201ENST00000397477 HSP90AA2PQ14568 343 aaPredicted RBP12.33□□□□□ -0.44
CPSF1P1-201ENST00000397477 NFXL1Q6ZNB6 911 aa12.33□□□□□ -0.44
CPSF1P1-201ENST00000397477 PCDH11XQ9BZA7 1347 aa12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 PCDH11YQ9BZA8 1340 aa12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 ERCC4Q92889 916 aaPredicted RBP12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 ZNF335Q9H4Z2 1342 aaPredicted RBP12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 CCDC192P0DO97 292 aa12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 LIG1P18858 919 aa12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 ATP2B1P20020 1258 aa12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 BICDL1Q6ZP65 573 aa12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 TRIM5Q9C035 493 aa12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 GPHNQ9NQX3 736 aaPredicted RBP12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 A0A087WWV3 80 aa12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 TRDNQ13061 729 aa12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 TTC6Q86TZ1 520 aa12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 KBTBD3Q8NAB2 608 aa12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 FTOQ9C0B1 505 aaKnown RBP eCLIP12.32□□□□□ -0.44
CPSF1P1-201ENST00000397477 SNAP23O00161 211 aa12.31□□□□□ -0.44
CPSF1P1-201ENST00000397477 MAP3K11Q16584 847 aa12.31□□□□□ -0.44
CPSF1P1-201ENST00000397477 SPATA31A3Q5VYP0 1347 aa12.31□□□□□ -0.44
CPSF1P1-201ENST00000397477 RPAP1Q9BWH6 1393 aaPredicted RBP12.31□□□□□ -0.44
CPSF1P1-201ENST00000397477 MEGF6O75095 1541 aa12.31□□□□□ -0.44
CPSF1P1-201ENST00000397477 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.31□□□□□ -0.44
CPSF1P1-201ENST00000397477 HMG20BQ9P0W2 317 aa12.31□□□□□ -0.44
CPSF1P1-201ENST00000397477 BECN2A8MW95 431 aa12.3□□□□□ -0.44
CPSF1P1-201ENST00000397477 ZAP70P43403 619 aa12.3□□□□□ -0.44
CPSF1P1-201ENST00000397477 XAGE2Q96GT9 111 aa12.3□□□□□ -0.44
CPSF1P1-201ENST00000397477 PPP1R9BQ96SB3 815 aa12.3□□□□□ -0.44
CPSF1P1-201ENST00000397477 SDF4Q9BRK5 362 aa12.3□□□□□ -0.44
CPSF1P1-201ENST00000397477 NWD1Q149M9 1564 aa12.3□□□□□ -0.44
CPSF1P1-201ENST00000397477 KDM6AO15550 1401 aaPredicted RBP12.3□□□□□ -0.44
CPSF1P1-201ENST00000397477 LUZP1Q86V48 1076 aa12.3□□□□□ -0.44
CPSF1P1-201ENST00000397477 TM6SF1Q9BZW5 370 aa12.3□□□□□ -0.44
CPSF1P1-201ENST00000397477 GOLGA6L19H0YKK7 550 aa12.29□□□□□ -0.44
CPSF1P1-201ENST00000397477 TOB2Q14106 344 aaPredicted RBP12.29□□□□□ -0.44
CPSF1P1-201ENST00000397477 ATP2B3Q16720 1220 aa12.29□□□□□ -0.44
CPSF1P1-201ENST00000397477 CCDC73Q6ZRK6 1079 aa12.29□□□□□ -0.44
CPSF1P1-201ENST00000397477 KIF3AQ9Y496 699 aa12.29□□□□□ -0.44
CPSF1P1-201ENST00000397477 HAUS7Q99871 368 aa12.29□□□□□ -0.44
CPSF1P1-201ENST00000397477 PTPDC1A2A3K4 754 aa12.29□□□□□ -0.44
CPSF1P1-201ENST00000397477 IMMTQ16891 758 aaKnown RBP12.29□□□□□ -0.44
CPSF1P1-201ENST00000397477 ISM2Q6H9L7 571 aa12.29□□□□□ -0.44
CPSF1P1-201ENST00000397477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.29□□□□□ -0.44
CPSF1P1-201ENST00000397477 GOLGA8BA8MQT2 603 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 RNF113AO15541 343 aaKnown RBP12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 LETM1O95202 739 aaPredicted RBP12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 SLC9C2Q5TAH2 1124 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 CCDC191Q8NCU4 936 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 MPHOSPH8Q99549 860 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 EXOC5O00471 708 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 PIP4K2BP78356 416 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 DHX32Q7L7V1 743 aaKnown RBP12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 SCAND2PQ9GZW5 306 aaPredicted RBP12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 ZKSCAN5Q9Y2L8 839 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 WDR17Q8IZU2 1322 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 KLF18A0A0U1RQI7 1052 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 ITGA6P23229 1130 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 RFX5P48382 616 aaPredicted RBP12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 HLFQ16534 295 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 LRRFIP1Q32MZ4 808 aaKnown RBP12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 ANO6Q4KMQ2 910 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 ABCF2Q9UG63 623 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 HEG1Q9ULI3 1381 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
CPSF1P1-201ENST00000397477 ZNF213O14771 459 aa12.27□□□□□ -0.44
CPSF1P1-201ENST00000397477 HSPD1P10809 573 aaKnown RBP12.27□□□□□ -0.44
CPSF1P1-201ENST00000397477 FOXO4P98177 505 aa12.27□□□□□ -0.44
CPSF1P1-201ENST00000397477 ST3GAL1Q11201 340 aa12.27□□□□□ -0.44
CPSF1P1-201ENST00000397477 SCRN1Q12765 414 aa12.27□□□□□ -0.44
CPSF1P1-201ENST00000397477 STK38Q15208 465 aa12.27□□□□□ -0.44
CPSF1P1-201ENST00000397477 PIGBQ92521 554 aa12.27□□□□□ -0.44
CPSF1P1-201ENST00000397477 ZNF592Q92610 1267 aa12.27□□□□□ -0.44
CPSF1P1-201ENST00000397477 DNAJC25Q9H1X3 360 aa12.27□□□□□ -0.44
CPSF1P1-201ENST00000397477 AKAP2Q9Y2D5 859 aa12.27□□□□□ -0.44
CPSF1P1-201ENST00000397477 TOPAZ1Q8N9V7 1692 aa12.27□□□□□ -0.44
CPSF1P1-201ENST00000397477 NCAPD2Q15021 1401 aa12.27□□□□□ -0.44
CPSF1P1-201ENST00000397477 ANKRD18BA2A2Z9 1011 aa12.27□□□□□ -0.45
CPSF1P1-201ENST00000397477 IRS4O14654 1257 aaPredicted RBP12.27□□□□□ -0.45
CPSF1P1-201ENST00000397477 E7EWF7 191 aa12.27□□□□□ -0.45
CPSF1P1-201ENST00000397477 BIN1O00499 593 aa12.27□□□□□ -0.45
CPSF1P1-201ENST00000397477 KINO60870 393 aaKnown RBP12.27□□□□□ -0.45
CPSF1P1-201ENST00000397477 KCNQ4P56696 695 aa12.27□□□□□ -0.45
CPSF1P1-201ENST00000397477 TCIRG1Q13488 830 aa12.27□□□□□ -0.45
CPSF1P1-201ENST00000397477 SYNE3Q6ZMZ3 975 aa12.27□□□□□ -0.45
CPSF1P1-201ENST00000397477 MICU3Q86XE3 530 aa12.27□□□□□ -0.45
CPSF1P1-201ENST00000397477 GREM2Q9H772 168 aa12.27□□□□□ -0.45
CPSF1P1-201ENST00000397477 GJB4Q9NTQ9 266 aa12.27□□□□□ -0.45
CPSF1P1-201ENST00000397477 USP42Q9H9J4 1324 aaKnown RBP12.27□□□□□ -0.45
CPSF1P1-201ENST00000397477 UQCRHLA0A096LP55 91 aa12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 H7C1W4 665 aa12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 M0R2C6 588 aa12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 UQCRHP07919 91 aa12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 SCARF1Q14162 830 aa12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 STOX1Q6ZVD7 989 aa12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 OSBP2Q969R2 916 aa12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 ATG9AQ7Z3C6 839 aa12.26□□□□□ -0.45
CPSF1P1-201ENST00000397477 LEO1Q8WVC0 666 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms