RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 CNTROBQ8N137 903 aa23.23■■□□□ 1.31
TSPAN4-204ENST00000397404 PI4K2BQ8TCG2 481 aa23.23■■□□□ 1.31
TSPAN4-204ENST00000397404 ATP5JP18859 108 aa23.22■■□□□ 1.31
TSPAN4-204ENST00000397404 PDE6BP35913 854 aa23.22■■□□□ 1.31
TSPAN4-204ENST00000397404 VGLL2Q8N8G2 317 aa23.22■■□□□ 1.31
TSPAN4-204ENST00000397404 RPGRQ92834 1020 aaKnown RBP23.22■■□□□ 1.31
TSPAN4-204ENST00000397404 RBM17Q96I25 401 aaKnown RBP23.22■■□□□ 1.31
TSPAN4-204ENST00000397404 PUS3Q9BZE2 481 aaKnown RBP23.22■■□□□ 1.31
TSPAN4-204ENST00000397404 ANKRD2Q9GZV1 360 aa23.22■■□□□ 1.31
TSPAN4-204ENST00000397404 UPF2Q9HAU5 1272 aaKnown RBP23.22■■□□□ 1.31
TSPAN4-204ENST00000397404 CASZ1Q86V15 1759 aa23.22■■□□□ 1.31
TSPAN4-204ENST00000397404 A0A1B0GUL7 405 aa23.21■■□□□ 1.31
TSPAN4-204ENST00000397404 MMP10P09238 476 aa23.21■■□□□ 1.31
TSPAN4-204ENST00000397404 HOXA10P31260 410 aaPredicted RBP23.21■■□□□ 1.31
TSPAN4-204ENST00000397404 LPIN2Q92539 896 aa23.21■■□□□ 1.31
TSPAN4-204ENST00000397404 SEC31BQ9NQW1 1179 aa23.21■■□□□ 1.31
TSPAN4-204ENST00000397404 GRAPQ13588 217 aa23.2■■□□□ 1.3
TSPAN4-204ENST00000397404 ATP2B3Q16720 1220 aa23.2■■□□□ 1.3
TSPAN4-204ENST00000397404 CCDC158Q5M9N0 1113 aa23.2■■□□□ 1.3
TSPAN4-204ENST00000397404 GRAPLQ8TC17 118 aaPredicted RBP23.2■■□□□ 1.3
TSPAN4-204ENST00000397404 ZNF512BQ96KM6 892 aaPredicted RBP23.2■■□□□ 1.3
TSPAN4-204ENST00000397404 DBNLQ9UJU6 430 aaKnown RBP23.2■■□□□ 1.3
TSPAN4-204ENST00000397404 SDSP20132 328 aa23.19■■□□□ 1.3
TSPAN4-204ENST00000397404 CRAMP1Q96RY5 1269 aa23.19■■□□□ 1.3
TSPAN4-204ENST00000397404 CCDC8Q9H0W5 538 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-204ENST00000397404 HIP1O00291 1037 aa23.18■■□□□ 1.3
TSPAN4-204ENST00000397404 BBOX1O75936 387 aa23.18■■□□□ 1.3
TSPAN4-204ENST00000397404 SLC5A1P13866 664 aa23.18■■□□□ 1.3
TSPAN4-204ENST00000397404 EVI5LQ96CN4 794 aa23.18■■□□□ 1.3
TSPAN4-204ENST00000397404 ZBTB22O15209 634 aa23.17■■□□□ 1.3
TSPAN4-204ENST00000397404 IFIT1P09914 478 aaKnown RBP23.17■■□□□ 1.3
TSPAN4-204ENST00000397404 UBE4AQ14139 1066 aa23.17■■□□□ 1.3
TSPAN4-204ENST00000397404 NEUROD6Q96NK8 337 aa23.17■■□□□ 1.3
TSPAN4-204ENST00000397404 TSHZ2Q9NRE2 1034 aa23.17■■□□□ 1.3
TSPAN4-204ENST00000397404 TNRC6CQ9HCJ0 1690 aaKnown RBP23.17■■□□□ 1.3
TSPAN4-204ENST00000397404 GORABQ5T7V8 394 aa23.17■■□□□ 1.3
TSPAN4-204ENST00000397404 C3orf67Q6ZVT6 689 aa23.17■■□□□ 1.3
TSPAN4-204ENST00000397404 UPF1Q92900 1129 aaKnown RBP eCLIP23.17■■□□□ 1.32e-9■■■■■ 55.1
TSPAN4-204ENST00000397404 BCL11AQ9H165 835 aa23.17■■□□□ 1.3
TSPAN4-204ENST00000397404 RFX7Q2KHR2 1363 aa23.16■■□□□ 1.3
TSPAN4-204ENST00000397404 SPEF2Q9C093 1822 aa23.16■■□□□ 1.3
TSPAN4-204ENST00000397404 TRIM6-TRIM34B2RNG4 842 aa23.16■■□□□ 1.3
TSPAN4-204ENST00000397404 FGFR2P21802 821 aa23.16■■□□□ 1.3
TSPAN4-204ENST00000397404 ALDH1B1P30837 517 aa23.16■■□□□ 1.3
TSPAN4-204ENST00000397404 LRRFIP1Q32MZ4 808 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-204ENST00000397404 ARAP2Q8WZ64 1704 aa23.15■■□□□ 1.3
TSPAN4-204ENST00000397404 NPR1P16066 1061 aa23.15■■□□□ 1.3
TSPAN4-204ENST00000397404 CHRNDQ07001 517 aa23.15■■□□□ 1.3
TSPAN4-204ENST00000397404 XAGE2Q96GT9 111 aa23.15■■□□□ 1.3
TSPAN4-204ENST00000397404 DBNDD2Q9BQY9 259 aa23.15■■□□□ 1.3
TSPAN4-204ENST00000397404 EPB41L2O43491 1005 aaKnown RBP23.14■■□□□ 1.29
TSPAN4-204ENST00000397404 UQCRFS1P1P0C7P4 283 aa23.14■■□□□ 1.29
TSPAN4-204ENST00000397404 TIMM10P62072 90 aa23.14■■□□□ 1.29
TSPAN4-204ENST00000397404 HAUS7Q99871 368 aa23.14■■□□□ 1.29
TSPAN4-204ENST00000397404 MINPP1Q9UNW1 487 aa23.14■■□□□ 1.29
TSPAN4-204ENST00000397404 CELF1Q92879 486 aaKnown RBP23.13■■□□□ 1.29
TSPAN4-204ENST00000397404 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.13■■□□□ 1.29
TSPAN4-204ENST00000397404 TBC1D9Q6ZT07 1266 aa23.12■■□□□ 1.29
TSPAN4-204ENST00000397404 TLR7Q9NYK1 1049 aaKnown RBP23.12■■□□□ 1.29
TSPAN4-204ENST00000397404 TTC39AQ5SRH9 613 aa23.11■■□□□ 1.29
TSPAN4-204ENST00000397404 RILPL2Q969X0 211 aa23.11■■□□□ 1.29
TSPAN4-204ENST00000397404 MASTLQ96GX5 879 aa23.11■■□□□ 1.29
TSPAN4-204ENST00000397404 LEMD3Q9Y2U8 911 aa23.11■■□□□ 1.29
TSPAN4-204ENST00000397404 AK9Q5TCS8 1911 aa23.11■■□□□ 1.29
TSPAN4-204ENST00000397404 IGSF3O75054 1194 aa23.11■■□□□ 1.29
TSPAN4-204ENST00000397404 REC8O95072 547 aa23.11■■□□□ 1.29
TSPAN4-204ENST00000397404 SRGNP10124 158 aa23.11■■□□□ 1.29
TSPAN4-204ENST00000397404 RUFY2Q8WXA3 655 aa23.11■■□□□ 1.29
TSPAN4-204ENST00000397404 TSHZ3Q63HK5 1081 aa23.1■■□□□ 1.29
TSPAN4-204ENST00000397404 TMX4Q9H1E5 349 aaPredicted RBP23.1■■□□□ 1.29
TSPAN4-204ENST00000397404 GNL3LQ9NVN8 582 aaKnown RBP23.1■■□□□ 1.29
TSPAN4-204ENST00000397404 ANKRD31Q8N7Z5 1873 aa23.09■■□□□ 1.29
TSPAN4-204ENST00000397404 XDHP47989 1333 aa23.09■■□□□ 1.29
TSPAN4-204ENST00000397404 ARID4AP29374 1257 aaPredicted RBP23.09■■□□□ 1.29
TSPAN4-204ENST00000397404 TTF1Q15361 905 aaPredicted RBP23.09■■□□□ 1.29
TSPAN4-204ENST00000397404 STYK1Q6J9G0 422 aa23.09■■□□□ 1.29
TSPAN4-204ENST00000397404 MTFR1LQ9H019 292 aa23.09■■□□□ 1.29
TSPAN4-204ENST00000397404 A0A1B0GUL6 1792 aa23.09■■□□□ 1.29
TSPAN4-204ENST00000397404 H0YIN7 160 aa23.08■■□□□ 1.29
TSPAN4-204ENST00000397404 CAVIN4Q5BKX8 364 aa23.08■■□□□ 1.29
TSPAN4-204ENST00000397404 MSL1Q68DK7 614 aa23.08■■□□□ 1.29
TSPAN4-204ENST00000397404 BOLA2Q9H3K6 86 aa23.08■■□□□ 1.29
TSPAN4-204ENST00000397404 SEMA3EO15041 775 aa23.07■■□□□ 1.28
TSPAN4-204ENST00000397404 KCNJ4P48050 445 aa23.07■■□□□ 1.28
TSPAN4-204ENST00000397404 CCDC24Q8N4L8 307 aa23.07■■□□□ 1.28
TSPAN4-204ENST00000397404 PODXL2Q9NZ53 605 aa23.07■■□□□ 1.28
TSPAN4-204ENST00000397404 RAD50Q92878 1312 aa23.07■■□□□ 1.28
TSPAN4-204ENST00000397404 CHMLP26374 656 aa23.06■■□□□ 1.28
TSPAN4-204ENST00000397404 POLD1P28340 1107 aa23.06■■□□□ 1.28
TSPAN4-204ENST00000397404 GRIPAP1Q4V328 841 aa23.06■■□□□ 1.28
TSPAN4-204ENST00000397404 C15orf52Q6ZUT6 534 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-204ENST00000397404 SP8Q8IXZ3 490 aa23.06■■□□□ 1.28
TSPAN4-204ENST00000397404 C10orf71Q711Q0 1435 aa23.06■■□□□ 1.28
TSPAN4-204ENST00000397404 CCDC102BQ68D86 513 aa23.05■■□□□ 1.28
TSPAN4-204ENST00000397404 TMED8Q6PL24 325 aaPredicted RBP23.05■■□□□ 1.28
TSPAN4-204ENST00000397404 CNKSR1Q969H4 720 aa23.05■■□□□ 1.28
TSPAN4-204ENST00000397404 PAG1Q9NWQ8 432 aa23.05■■□□□ 1.28
TSPAN4-204ENST00000397404 PDS5AQ29RF7 1337 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-204ENST00000397404 KBTBD3Q8NAB2 608 aa23.05■■□□□ 1.28
TSPAN4-204ENST00000397404 IL27Q8NEV9 243 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms