RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 COL15A1P39059 1388 aa28.14■■■□□ 2.1
CSNK1E-203ENST00000396832 VGLL3A8MV65 326 aa28.14■■■□□ 2.1
CSNK1E-203ENST00000396832 IQCB1Q15051 598 aa28.14■■■□□ 2.1
CSNK1E-203ENST00000396832 CAVIN2O95810 425 aa28.14■■■□□ 2.09
CSNK1E-203ENST00000396832 HOXB7P09629 217 aa28.14■■■□□ 2.09
CSNK1E-203ENST00000396832 SARM1Q6SZW1 724 aa28.14■■■□□ 2.09
CSNK1E-203ENST00000396832 Q6ZUG5 572 aa28.14■■■□□ 2.09
CSNK1E-203ENST00000396832 NPHP1O15259 732 aa28.13■■■□□ 2.09
CSNK1E-203ENST00000396832 ALDH1L1O75891 902 aa28.13■■■□□ 2.09
CSNK1E-203ENST00000396832 GUCY1B3Q02153 619 aa28.13■■■□□ 2.09
CSNK1E-203ENST00000396832 MRFAP1L1Q96HT8 127 aa28.13■■■□□ 2.09
CSNK1E-203ENST00000396832 PHF8Q9UPP1 1060 aa28.13■■■□□ 2.09
CSNK1E-203ENST00000396832 TAOK2Q9UL54 1235 aa28.13■■■□□ 2.09
CSNK1E-203ENST00000396832 TBX22Q9Y458 520 aa28.13■■■□□ 2.09
CSNK1E-203ENST00000396832 SLU7O95391 586 aaKnown RBP28.12■■■□□ 2.09
CSNK1E-203ENST00000396832 IGKV5-2P06315 115 aa28.12■■■□□ 2.09
CSNK1E-203ENST00000396832 C11orf57Q6ZUT1 292 aaPredicted RBP28.12■■■□□ 2.09
CSNK1E-203ENST00000396832 FILIP1Q7Z7B0 1213 aa28.12■■■□□ 2.09
CSNK1E-203ENST00000396832 USP16Q9Y5T5 823 aa28.12■■■□□ 2.09
CSNK1E-203ENST00000396832 CCDC69A6NI79 296 aa28.12■■■□□ 2.09
CSNK1E-203ENST00000396832 DDX46Q7L014 1031 aaKnown RBP28.12■■■□□ 2.09
CSNK1E-203ENST00000396832 PLEKHO1Q53GL0 409 aaPredicted RBP28.11■■■□□ 2.09
CSNK1E-203ENST00000396832 ESCO1Q5FWF5 840 aa28.11■■■□□ 2.09
CSNK1E-203ENST00000396832 ZNF446Q9NWS9 450 aa28.11■■■□□ 2.09
CSNK1E-203ENST00000396832 TAF5LO75529 589 aa28.11■■■□□ 2.09
CSNK1E-203ENST00000396832 PSME1Q06323 249 aa28.11■■■□□ 2.09
CSNK1E-203ENST00000396832 LINS1Q8NG48 757 aa28.11■■■□□ 2.09
CSNK1E-203ENST00000396832 KDM3BQ7LBC6 1761 aa28.11■■■□□ 2.09
CSNK1E-203ENST00000396832 ANKRD1Q15327 319 aa28.11■■■□□ 2.09
CSNK1E-203ENST00000396832 CCAR2Q8N163 923 aaKnown RBP28.11■■■□□ 2.09
CSNK1E-203ENST00000396832 MYD88Q99836 296 aa28.11■■■□□ 2.09
CSNK1E-203ENST00000396832 HIP1O00291 1037 aa28.1■■■□□ 2.09
CSNK1E-203ENST00000396832 CCZ1BP86790 482 aa28.1■■■□□ 2.09
CSNK1E-203ENST00000396832 CCZ1P86791 482 aaPredicted RBP28.1■■■□□ 2.09
CSNK1E-203ENST00000396832 MED23Q9ULK4 1368 aa28.1■■■□□ 2.09
CSNK1E-203ENST00000396832 ERBB3P21860 1342 aa28.1■■■□□ 2.09
CSNK1E-203ENST00000396832 CALCOCO1Q9P1Z2 691 aa28.1■■■□□ 2.09
CSNK1E-203ENST00000396832 CCT2P78371 535 aaKnown RBP28.09■■■□□ 2.09
CSNK1E-203ENST00000396832 GTF3C6Q969F1 213 aa28.09■■■□□ 2.09
CSNK1E-203ENST00000396832 DBNLQ9UJU6 430 aaKnown RBP28.09■■■□□ 2.09
CSNK1E-203ENST00000396832 NEK1Q96PY6 1258 aa28.09■■■□□ 2.09
CSNK1E-203ENST00000396832 A0A0G2JLW4 131 aa28.08■■■□□ 2.09
CSNK1E-203ENST00000396832 CHST3Q7LGC8 479 aa28.08■■■□□ 2.09
CSNK1E-203ENST00000396832 TFCP2Q12800 502 aa28.08■■■□□ 2.09
CSNK1E-203ENST00000396832 RESTQ13127 1097 aa28.07■■■□□ 2.08
CSNK1E-203ENST00000396832 NCOA5Q9HCD5 579 aaKnown RBP28.07■■■□□ 2.08
CSNK1E-203ENST00000396832 PDE4CQ08493 712 aa28.07■■■□□ 2.08
CSNK1E-203ENST00000396832 SCRN1Q12765 414 aa28.07■■■□□ 2.08
CSNK1E-203ENST00000396832 CYP21A2P08686 494 aa28.06■■■□□ 2.08
CSNK1E-203ENST00000396832 NOL10Q9BSC4 688 aaKnown RBP28.06■■■□□ 2.08
CSNK1E-203ENST00000396832 ADGRL3Q9HAR2 1447 aa28.06■■■□□ 2.08
CSNK1E-203ENST00000396832 BECN2A8MW95 431 aa28.06■■■□□ 2.08
CSNK1E-203ENST00000396832 MED1Q15648 1581 aaPredicted RBP28.06■■■□□ 2.08
CSNK1E-203ENST00000396832 FAM193AP78312 1265 aa28.05■■■□□ 2.08
CSNK1E-203ENST00000396832 BMS1Q14692 1282 aaKnown RBP28.05■■■□□ 2.08
CSNK1E-203ENST00000396832 XAGE3Q8WTP9 111 aa28.05■■■□□ 2.08
CSNK1E-203ENST00000396832 GOLPH3LQ9H4A5 285 aa28.05■■■□□ 2.08
CSNK1E-203ENST00000396832 ATP5J2-PTCD1G3V325 749 aa28.05■■■□□ 2.08
CSNK1E-203ENST00000396832 PTCD1O75127 700 aaKnown RBP28.05■■■□□ 2.08
CSNK1E-203ENST00000396832 DBNDD2Q9BQY9 259 aa28.05■■■□□ 2.08
CSNK1E-203ENST00000396832 DDX58O95786 925 aaKnown RBP28.04■■■□□ 2.08
CSNK1E-203ENST00000396832 APOBRQ0VD83 1088 aa28.04■■■□□ 2.08
CSNK1E-203ENST00000396832 STX1AQ16623 288 aa28.04■■■□□ 2.08
CSNK1E-203ENST00000396832 ERCC6LQ2NKX8 1250 aa28.04■■■□□ 2.08
CSNK1E-203ENST00000396832 COPS6Q7L5N1 327 aa28.04■■■□□ 2.08
CSNK1E-203ENST00000396832 STOX1Q6ZVD7 989 aa28.03■■■□□ 2.08
CSNK1E-203ENST00000396832 CCAR1Q8IX12 1150 aaKnown RBP28.03■■■□□ 2.08
CSNK1E-203ENST00000396832 SYTL4Q96C24 671 aaPredicted RBP28.03■■■□□ 2.08
CSNK1E-203ENST00000396832 PDIA6Q15084 440 aa28.03■■■□□ 2.08
CSNK1E-203ENST00000396832 UBE3BQ7Z3V4 1068 aa28.03■■■□□ 2.08
CSNK1E-203ENST00000396832 CHD2O14647 1828 aaKnown RBP28.03■■■□□ 2.08
CSNK1E-203ENST00000396832 ZNF609O15014 1411 aa28.02■■■□□ 2.08
CSNK1E-203ENST00000396832 NEURL1BA8MQ27 555 aa28.02■■■□□ 2.08
CSNK1E-203ENST00000396832 KIF2AO00139 706 aaPredicted RBP28.02■■■□□ 2.08
CSNK1E-203ENST00000396832 H2AFXP16104 143 aaPredicted RBP28.02■■■□□ 2.08
CSNK1E-203ENST00000396832 CREBRFQ8IUR6 639 aa28.02■■■□□ 2.08
CSNK1E-203ENST00000396832 ANKRD24Q8TF21 1146 aa28.02■■■□□ 2.08
CSNK1E-203ENST00000396832 THEMISQ8N1K5 641 aaPredicted RBP28.01■■■□□ 2.07
CSNK1E-203ENST00000396832 KCND1Q9NSA2 647 aa28.01■■■□□ 2.07
CSNK1E-203ENST00000396832 CYP2C19P33261 490 aa28.01■■■□□ 2.07
CSNK1E-203ENST00000396832 NEXNQ0ZGT2 675 aa28.01■■■□□ 2.07
CSNK1E-203ENST00000396832 DHX40Q8IX18 779 aaKnown RBP28.01■■■□□ 2.07
CSNK1E-203ENST00000396832 DDX21Q9NR30 783 aaKnown RBP eCLIP28.01■■■□□ 2.07
CSNK1E-203ENST00000396832 AXIN2Q9Y2T1 843 aa28.01■■■□□ 2.07
CSNK1E-203ENST00000396832 SNW1Q13573 536 aaKnown RBP28■■■□□ 2.07
CSNK1E-203ENST00000396832 HMG20BQ9P0W2 317 aa28■■■□□ 2.07
CSNK1E-203ENST00000396832 FHOD1Q9Y613 1164 aa28■■■□□ 2.07
CSNK1E-203ENST00000396832 TNNI3KQ59H18 835 aa28■■■□□ 2.07
CSNK1E-203ENST00000396832 USP28Q96RU2 1077 aa28■■■□□ 2.07
CSNK1E-203ENST00000396832 FPGT-TNNI3KV9GXZ4 949 aa28■■■□□ 2.07
CSNK1E-203ENST00000396832 TULP2O00295 520 aa27.99■■■□□ 2.07
CSNK1E-203ENST00000396832 GCKRQ14397 625 aa27.99■■■□□ 2.07
CSNK1E-203ENST00000396832 CFAP45Q9UL16 551 aa27.99■■■□□ 2.07
CSNK1E-203ENST00000396832 LRRN4CLQ8ND94 238 aa27.99■■■□□ 2.07
CSNK1E-203ENST00000396832 CHMP4AQ9BY43 222 aa27.99■■■□□ 2.07
CSNK1E-203ENST00000396832 L2HGDHQ9H9P8 463 aa27.99■■■□□ 2.07
CSNK1E-203ENST00000396832 CTAGE5O15320 804 aa27.99■■■□□ 2.07
CSNK1E-203ENST00000396832 CAPN2P17655 700 aa27.99■■■□□ 2.07
CSNK1E-203ENST00000396832 RAB11FIP4Q86YS3 637 aa27.99■■■□□ 2.07
CSNK1E-203ENST00000396832 ALDH8A1Q9H2A2 487 aaPredicted RBP27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms