RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 DBNDD2Q9BQY9 259 aa17.17■□□□□ 0.34
CDC42SE2-202ENST00000395246 COL11A2P13942 1736 aaPredicted RBP17.17■□□□□ 0.34
CDC42SE2-202ENST00000395246 ECM29Q5VYK3 1845 aa17.17■□□□□ 0.34
CDC42SE2-202ENST00000395246 KLRG2A4D1S0 409 aaPredicted RBP17.17■□□□□ 0.34
CDC42SE2-202ENST00000395246 CDK5RAP2Q96SN8 1893 aa17.17■□□□□ 0.34
CDC42SE2-202ENST00000395246 NUTM2BA6NNL0 878 aaPredicted RBP17.17■□□□□ 0.34
CDC42SE2-202ENST00000395246 NUTM2EB1AL46 878 aaPredicted RBP17.17■□□□□ 0.34
CDC42SE2-202ENST00000395246 IFIT5Q13325 482 aaKnown RBP17.17■□□□□ 0.34
CDC42SE2-202ENST00000395246 CCDC57Q2TAC2 916 aa17.17■□□□□ 0.34
CDC42SE2-202ENST00000395246 NUTM2AQ8IVF1 878 aaPredicted RBP17.17■□□□□ 0.34
CDC42SE2-202ENST00000395246 GREM2Q9H772 168 aa17.17■□□□□ 0.34
CDC42SE2-202ENST00000395246 TAF1P21675 1872 aa17.17■□□□□ 0.34
CDC42SE2-202ENST00000395246 PDE8BO95263 885 aa17.16■□□□□ 0.34
CDC42SE2-202ENST00000395246 ITGA6P23229 1130 aa17.16■□□□□ 0.34
CDC42SE2-202ENST00000395246 VPS53Q5VIR6 699 aa17.16■□□□□ 0.34
CDC42SE2-202ENST00000395246 A0A1B0GUL7 405 aa17.16■□□□□ 0.34
CDC42SE2-202ENST00000395246 ST18O60284 1047 aa17.16■□□□□ 0.34
CDC42SE2-202ENST00000395246 FAM89AQ96GI7 184 aa17.16■□□□□ 0.34
CDC42SE2-202ENST00000395246 WDR19Q8NEZ3 1342 aa17.16■□□□□ 0.34
CDC42SE2-202ENST00000395246 ANKRD18BA2A2Z9 1011 aa17.16■□□□□ 0.34
CDC42SE2-202ENST00000395246 ZFYP08048 801 aaPredicted RBP17.16■□□□□ 0.34
CDC42SE2-202ENST00000395246 PSME4Q14997 1843 aa17.15■□□□□ 0.34
CDC42SE2-202ENST00000395246 NFKBIBQ15653 356 aa17.15■□□□□ 0.34
CDC42SE2-202ENST00000395246 C15orf52Q6ZUT6 534 aaKnown RBP17.15■□□□□ 0.34
CDC42SE2-202ENST00000395246 NMIQ13287 307 aaPredicted RBP17.15■□□□□ 0.34
CDC42SE2-202ENST00000395246 OS9Q13438 667 aaPredicted RBP17.15■□□□□ 0.34
CDC42SE2-202ENST00000395246 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
CDC42SE2-202ENST00000395246 CCDC8Q9H0W5 538 aaPredicted RBP17.15■□□□□ 0.34
CDC42SE2-202ENST00000395246 PDIA4P13667 645 aaKnown RBP17.15■□□□□ 0.34
CDC42SE2-202ENST00000395246 APBB1O00213 710 aa17.14■□□□□ 0.33
CDC42SE2-202ENST00000395246 EVCP57679 992 aa17.14■□□□□ 0.33
CDC42SE2-202ENST00000395246 A0A0D9SFI3 127 aa17.14■□□□□ 0.33
CDC42SE2-202ENST00000395246 TRIM6-TRIM34B2RNG4 842 aa17.14■□□□□ 0.33
CDC42SE2-202ENST00000395246 RILPL2Q969X0 211 aa17.14■□□□□ 0.33
CDC42SE2-202ENST00000395246 NID2Q14112 1375 aa17.14■□□□□ 0.33
CDC42SE2-202ENST00000395246 MYT1Q01538 1121 aa17.13■□□□□ 0.33
CDC42SE2-202ENST00000395246 PTH1RQ03431 593 aa17.13■□□□□ 0.33
CDC42SE2-202ENST00000395246 FOXP2O15409 715 aa17.13■□□□□ 0.33
CDC42SE2-202ENST00000395246 NYXQ9GZU5 481 aa17.13■□□□□ 0.33
CDC42SE2-202ENST00000395246 PAG1Q9NWQ8 432 aa17.13■□□□□ 0.33
CDC42SE2-202ENST00000395246 LPIN2Q92539 896 aa17.13■□□□□ 0.33
CDC42SE2-202ENST00000395246 TCRBV5S4A2TA0A5A2 114 aa17.12■□□□□ 0.33
CDC42SE2-202ENST00000395246 PLSCR1O15162 318 aa17.12■□□□□ 0.33
CDC42SE2-202ENST00000395246 TM4SF1P30408 202 aa17.12■□□□□ 0.33
CDC42SE2-202ENST00000395246 XAGE2Q96GT9 111 aa17.12■□□□□ 0.33
CDC42SE2-202ENST00000395246 PUM3Q15397 648 aaKnown RBP17.12■□□□□ 0.33
CDC42SE2-202ENST00000395246 MCMDC2Q4G0Z9 681 aa17.12■□□□□ 0.33
CDC42SE2-202ENST00000395246 PTMSP20962 102 aa17.12■□□□□ 0.33
CDC42SE2-202ENST00000395246 RASEFQ8IZ41 740 aa17.12■□□□□ 0.33
CDC42SE2-202ENST00000395246 ACSBG1Q96GR2 724 aa17.12■□□□□ 0.33
CDC42SE2-202ENST00000395246 BSDC1Q9NW68 430 aaPredicted RBP17.12■□□□□ 0.33
CDC42SE2-202ENST00000395246 CEP126Q9P2H0 1117 aa17.12■□□□□ 0.33
CDC42SE2-202ENST00000395246 TRMT112Q9UI30 125 aaKnown RBP17.12■□□□□ 0.33
CDC42SE2-202ENST00000395246 CCDC152Q4G0S7 254 aa17.11■□□□□ 0.33
CDC42SE2-202ENST00000395246 FAM196AQ6ZSG2 479 aa17.11■□□□□ 0.33
CDC42SE2-202ENST00000395246 SLC4A3P48751 1232 aa17.11■□□□□ 0.33
CDC42SE2-202ENST00000395246 PTF1AQ7RTS3 328 aa17.11■□□□□ 0.33
CDC42SE2-202ENST00000395246 SEPT12Q8IYM1 358 aa17.11■□□□□ 0.33
CDC42SE2-202ENST00000395246 CDC5LQ99459 802 aaKnown RBP17.11■□□□□ 0.33
CDC42SE2-202ENST00000395246 SIL1Q9H173 461 aa17.11■□□□□ 0.33
CDC42SE2-202ENST00000395246 DIAPH3Q9NSV4 1193 aa17.11■□□□□ 0.33
CDC42SE2-202ENST00000395246 COL1A1P02452 1464 aaPredicted RBP17.1■□□□□ 0.33
CDC42SE2-202ENST00000395246 SLC27A2O14975 620 aa17.1■□□□□ 0.33
CDC42SE2-202ENST00000395246 UQCRFS1P1P0C7P4 283 aa17.1■□□□□ 0.33
CDC42SE2-202ENST00000395246 CRY2Q49AN0 593 aa17.1■□□□□ 0.33
CDC42SE2-202ENST00000395246 ZNF594Q96JF6 807 aaPredicted RBP17.1■□□□□ 0.33
CDC42SE2-202ENST00000395246 FAM227BQ96M60 508 aa17.1■□□□□ 0.33
CDC42SE2-202ENST00000395246 UBE3CQ15386 1083 aa17.1■□□□□ 0.33
CDC42SE2-202ENST00000395246 ALX1Q15699 326 aa17.1■□□□□ 0.33
CDC42SE2-202ENST00000395246 RUFY3Q7L099 469 aa17.1■□□□□ 0.33
CDC42SE2-202ENST00000395246 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
CDC42SE2-202ENST00000395246 RNF113AO15541 343 aaKnown RBP17.09■□□□□ 0.33
CDC42SE2-202ENST00000395246 CREB3L3Q68CJ9 461 aa17.09■□□□□ 0.33
CDC42SE2-202ENST00000395246 SYNE4Q8N205 404 aa17.09■□□□□ 0.33
CDC42SE2-202ENST00000395246 JARID2Q92833 1246 aaPredicted RBP17.09■□□□□ 0.33
CDC42SE2-202ENST00000395246 TTF1Q15361 905 aaPredicted RBP17.09■□□□□ 0.33
CDC42SE2-202ENST00000395246 LRRFIP1Q32MZ4 808 aaKnown RBP17.09■□□□□ 0.33
CDC42SE2-202ENST00000395246 TBC1D2BQ9UPU7 963 aa17.09■□□□□ 0.33
CDC42SE2-202ENST00000395246 KRT32Q14532 448 aa17.09■□□□□ 0.33
CDC42SE2-202ENST00000395246 ZNF589Q86UQ0 364 aaPredicted RBP17.09■□□□□ 0.33
CDC42SE2-202ENST00000395246 TMX3Q96JJ7 454 aa17.08■□□□□ 0.33
CDC42SE2-202ENST00000395246 SEMA3EO15041 775 aa17.08■□□□□ 0.32
CDC42SE2-202ENST00000395246 BOLA2Q9H3K6 86 aa17.08■□□□□ 0.32
CDC42SE2-202ENST00000395246 ANO2Q9NQ90 1003 aa17.08■□□□□ 0.32
CDC42SE2-202ENST00000395246 CWC27Q6UX04 472 aaKnown RBP17.08■□□□□ 0.32
CDC42SE2-202ENST00000395246 NUCB2P80303 420 aa17.07■□□□□ 0.32
CDC42SE2-202ENST00000395246 ZSCAN31Q96LW9 406 aaPredicted RBP17.07■□□□□ 0.32
CDC42SE2-202ENST00000395246 RBM8AQ9Y5S9 174 aaKnown RBP17.07■□□□□ 0.32
CDC42SE2-202ENST00000395246 ATP2B3Q16720 1220 aa17.07■□□□□ 0.32
CDC42SE2-202ENST00000395246 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
CDC42SE2-202ENST00000395246 LRRC4BQ9NT99 713 aa17.07■□□□□ 0.32
CDC42SE2-202ENST00000395246 DAXXQ9UER7 740 aaPredicted RBP17.07■□□□□ 0.32
CDC42SE2-202ENST00000395246 SALL1Q9NSC2 1324 aa17.07■□□□□ 0.32
CDC42SE2-202ENST00000395246 MCAMP43121 646 aa17.06■□□□□ 0.32
CDC42SE2-202ENST00000395246 UBE4AQ14139 1066 aa17.06■□□□□ 0.32
CDC42SE2-202ENST00000395246 AMIGO3Q86WK7 504 aa17.06■□□□□ 0.32
CDC42SE2-202ENST00000395246 SH2B1Q9NRF2 756 aaPredicted RBP17.06■□□□□ 0.32
CDC42SE2-202ENST00000395246 PNPLA7Q6ZV29 1317 aa17.06■□□□□ 0.32
CDC42SE2-202ENST00000395246 EXOSC10Q01780 885 aaKnown RBP17.06■□□□□ 0.32
CDC42SE2-202ENST00000395246 CCDC158Q5M9N0 1113 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms