RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 CBFA2T2O43439 604 aa13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 PDILTQ8N807 584 aa13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 CWC25Q9NXE8 425 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 DHX32Q7L7V1 743 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 CREBRFQ8IUR6 639 aa13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 TECPR2O15040 1411 aa13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 GOLGA8BA8MQT2 603 aa13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 PPFIA3O75145 1194 aa13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 SART3Q15020 963 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 TOM1L2Q6ZVM7 507 aa13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 TTC6Q86TZ1 520 aa13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 CGNQ9P2M7 1197 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 A0A0D9SFI3 127 aa13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 CBX8Q9HC52 389 aa13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 TRMT1Q9NXH9 659 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-209ENST00000394804 ANKRD26Q9UPS8 1709 aa13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 TNNI3KQ59H18 835 aa13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 ZNF790Q6PG37 636 aa13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 NFATC2IPQ8NCF5 419 aa13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 RASSF8Q8NHQ8 419 aa13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 MAP4K1Q92918 833 aa13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 FPGT-TNNI3KV9GXZ4 949 aa13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 LTBP4Q8N2S1 1624 aa13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 ADGRL3Q9HAR2 1447 aa13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 SLC3A2P08195 630 aaKnown RBP13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 LIG1P18858 919 aa13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 CEP135Q66GS9 1140 aa13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 CCDC85AQ96PX6 553 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 METTL22Q9BUU2 404 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 ORC3Q9UBD5 711 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 AK9Q5TCS8 1911 aa13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 PTPDC1A2A3K4 754 aa13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 PIP4K2AP48426 406 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 PAG1Q9NWQ8 432 aa13.6□□□□□ -0.23
UBE2D3-209ENST00000394804 LARGE1O95461 756 aa13.59□□□□□ -0.23
UBE2D3-209ENST00000394804 TEX35Q5T0J7 233 aa13.59□□□□□ -0.23
UBE2D3-209ENST00000394804 MRPS27Q92552 414 aaKnown RBP13.59□□□□□ -0.23
UBE2D3-209ENST00000394804 USP16Q9Y5T5 823 aa13.59□□□□□ -0.23
UBE2D3-209ENST00000394804 XRN1Q8IZH2 1706 aaKnown RBP13.59□□□□□ -0.23
UBE2D3-209ENST00000394804 GCKRQ14397 625 aa13.59□□□□□ -0.23
UBE2D3-209ENST00000394804 SKILP12757 684 aa13.59□□□□□ -0.23
UBE2D3-209ENST00000394804 IL15P40933 162 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-209ENST00000394804 HAND2P61296 217 aa13.59□□□□□ -0.23
UBE2D3-209ENST00000394804 APOBRQ0VD83 1088 aa13.59□□□□□ -0.23
UBE2D3-209ENST00000394804 KLHL34Q8N239 644 aa13.59□□□□□ -0.23
UBE2D3-209ENST00000394804 TTC14Q96N46 770 aa13.59□□□□□ -0.23
UBE2D3-209ENST00000394804 ZBTB3Q9H5J0 574 aa13.59□□□□□ -0.23
UBE2D3-209ENST00000394804 ZNF213O14771 459 aa13.58□□□□□ -0.23
UBE2D3-209ENST00000394804 ATP2B1P20020 1258 aa13.58□□□□□ -0.23
UBE2D3-209ENST00000394804 CCDC129Q6ZRS4 1044 aa13.58□□□□□ -0.23
UBE2D3-209ENST00000394804 DBNDD2Q9BQY9 259 aa13.58□□□□□ -0.23
UBE2D3-209ENST00000394804 PRDM11Q9NQV5 511 aa13.58□□□□□ -0.23
UBE2D3-209ENST00000394804 SNRKQ9NRH2 765 aa13.58□□□□□ -0.23
UBE2D3-209ENST00000394804 POLR3DP05423 398 aaPredicted RBP13.58□□□□□ -0.24
UBE2D3-209ENST00000394804 CFAP100Q494V2 611 aa13.58□□□□□ -0.24
UBE2D3-209ENST00000394804 TRIM22Q8IYM9 498 aa13.58□□□□□ -0.24
UBE2D3-209ENST00000394804 LLPHQ9BRT6 129 aaKnown RBP13.58□□□□□ -0.24
UBE2D3-209ENST00000394804 JAK2O60674 1132 aa13.58□□□□□ -0.24
UBE2D3-209ENST00000394804 ZNF75DP51815 510 aa13.58□□□□□ -0.24
UBE2D3-209ENST00000394804 ATL3Q6DD88 541 aa13.58□□□□□ -0.24
UBE2D3-209ENST00000394804 SPDYE4A6NLX3 237 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 FAM177BA6PVY3 158 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 IDH1O75874 414 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 ATP5JP18859 108 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 PROSER3Q2NL68 480 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 RRP12Q5JTH9 1297 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 METTL24Q5JXM2 366 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 ANKRD20A12PQ8NF67 263 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 KCNG4Q8TDN1 519 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 BIN1O00499 593 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 RIOK3O14730 519 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 XBP1P17861 261 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 GTF3C6Q969F1 213 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 EDC3Q96F86 508 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 ELP1O95163 1332 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 NWD1Q149M9 1564 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 TMC6Q7Z403 805 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 AOPEPQ8N6M6 819 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 DACH1Q9UI36 760 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 KLF18A0A0U1RQI7 1052 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 CCDC69A6NI79 296 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 NEURL1BA8MQ27 555 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 GPS2Q13227 327 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 MTX1Q13505 466 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 NECTIN1Q15223 517 aa13.57□□□□□ -0.24
UBE2D3-209ENST00000394804 ZFYP08048 801 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-209ENST00000394804 NCOA7Q8NI08 942 aa13.56□□□□□ -0.24
UBE2D3-209ENST00000394804 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-209ENST00000394804 PES1O00541 588 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-209ENST00000394804 IFIT5Q13325 482 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-209ENST00000394804 KBTBD3Q8NAB2 608 aa13.56□□□□□ -0.24
UBE2D3-209ENST00000394804 CCDC150Q8NCX0 1101 aa13.56□□□□□ -0.24
UBE2D3-209ENST00000394804 SYTL4Q96C24 671 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-209ENST00000394804 ITSN1Q15811 1721 aa13.56□□□□□ -0.24
UBE2D3-209ENST00000394804 HELLSQ9NRZ9 838 aa13.56□□□□□ -0.24
UBE2D3-209ENST00000394804 FAM160A1Q05DH4 1040 aa13.55□□□□□ -0.24
UBE2D3-209ENST00000394804 TSR1Q2NL82 804 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-209ENST00000394804 SMAP1Q8IYB5 467 aaPredicted RBP13.55□□□□□ -0.24
UBE2D3-209ENST00000394804 SNW1Q13573 536 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms