RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SPATA31A1Q5TZJ5 1347 aa21.74■■□□□ 1.07
PCDHA1-202ENST00000394633 TAF5LO75529 589 aa21.74■■□□□ 1.07
PCDHA1-202ENST00000394633 TPM3P06753 285 aa21.74■■□□□ 1.07
PCDHA1-202ENST00000394633 STK3Q13188 491 aa21.74■■□□□ 1.07
PCDHA1-202ENST00000394633 TSC1Q92574 1164 aa21.74■■□□□ 1.07
PCDHA1-202ENST00000394633 TFIP11Q9UBB9 837 aaKnown RBP21.74■■□□□ 1.07
PCDHA1-202ENST00000394633 AFDNP55196 1824 aaKnown RBP21.73■■□□□ 1.07
PCDHA1-202ENST00000394633 NEURL1BA8MQ27 555 aa21.73■■□□□ 1.07
PCDHA1-202ENST00000394633 SCAND2PQ9GZW5 306 aaPredicted RBP21.73■■□□□ 1.07
PCDHA1-202ENST00000394633 COL15A1P39059 1388 aa21.73■■□□□ 1.07
PCDHA1-202ENST00000394633 DACT1Q9NYF0 836 aa21.72■■□□□ 1.07
PCDHA1-202ENST00000394633 CABP4P57796 275 aa21.72■■□□□ 1.07
PCDHA1-202ENST00000394633 NKX1-1Q15270 411 aaPredicted RBP21.72■■□□□ 1.07
PCDHA1-202ENST00000394633 USPL1Q5W0Q7 1092 aa21.72■■□□□ 1.07
PCDHA1-202ENST00000394633 LEO1Q8WVC0 666 aaPredicted RBP21.72■■□□□ 1.07
PCDHA1-202ENST00000394633 SPATA32Q96LK8 384 aa21.72■■□□□ 1.07
PCDHA1-202ENST00000394633 TNMDQ9H2S6 317 aa21.72■■□□□ 1.07
PCDHA1-202ENST00000394633 MYH15Q9Y2K3 1946 aa21.71■■□□□ 1.07
PCDHA1-202ENST00000394633 GCKRQ14397 625 aa21.71■■□□□ 1.07
PCDHA1-202ENST00000394633 LUZP1Q86V48 1076 aa21.71■■□□□ 1.07
PCDHA1-202ENST00000394633 ZNF710Q8N1W2 664 aa21.71■■□□□ 1.07
PCDHA1-202ENST00000394633 LAMA4Q16363 1823 aa21.71■■□□□ 1.07
PCDHA1-202ENST00000394633 CKAP2LQ8IYA6 745 aa21.71■■□□□ 1.07
PCDHA1-202ENST00000394633 ARID3AQ99856 593 aa21.71■■□□□ 1.07
PCDHA1-202ENST00000394633 BCL9LQ86UU0 1499 aa21.71■■□□□ 1.07
PCDHA1-202ENST00000394633 GOLGA6L6A8MZA4 724 aa21.7■■□□□ 1.06
PCDHA1-202ENST00000394633 MYL6BP14649 208 aa21.7■■□□□ 1.06
PCDHA1-202ENST00000394633 ZNF496Q96IT1 587 aaPredicted RBP21.7■■□□□ 1.06
PCDHA1-202ENST00000394633 MYD88Q99836 296 aa21.7■■□□□ 1.06
PCDHA1-202ENST00000394633 GLI3P10071 1580 aa21.7■■□□□ 1.06
PCDHA1-202ENST00000394633 NEXNQ0ZGT2 675 aa21.7■■□□□ 1.06
PCDHA1-202ENST00000394633 RBM43Q6ZSC3 357 aaKnown RBP21.7■■□□□ 1.06
PCDHA1-202ENST00000394633 XAGE3Q8WTP9 111 aa21.7■■□□□ 1.06
PCDHA1-202ENST00000394633 NGLY1Q96IV0 654 aa21.7■■□□□ 1.06
PCDHA1-202ENST00000394633 PKNOX2Q96KN3 472 aa21.7■■□□□ 1.06
PCDHA1-202ENST00000394633 DBNLQ9UJU6 430 aaKnown RBP21.7■■□□□ 1.06
PCDHA1-202ENST00000394633 SPATA31A5Q5VU36 1347 aa21.69■■□□□ 1.06
PCDHA1-202ENST00000394633 SPATA31A7Q8IWB4 1347 aa21.69■■□□□ 1.06
PCDHA1-202ENST00000394633 KAT6BQ8WYB5 2073 aa21.69■■□□□ 1.06
PCDHA1-202ENST00000394633 JAK2O60674 1132 aa21.69■■□□□ 1.06
PCDHA1-202ENST00000394633 ATP5JP18859 108 aa21.69■■□□□ 1.06
PCDHA1-202ENST00000394633 ANO6Q4KMQ2 910 aa21.69■■□□□ 1.06
PCDHA1-202ENST00000394633 CLSTN2Q9H4D0 955 aa21.69■■□□□ 1.06
PCDHA1-202ENST00000394633 CBX8Q9HC52 389 aa21.69■■□□□ 1.06
PCDHA1-202ENST00000394633 DDX19AQ9NUU7 478 aaKnown RBP21.69■■□□□ 1.06
PCDHA1-202ENST00000394633 GOLGA6L4A6NEF3 574 aa21.68■■□□□ 1.06
PCDHA1-202ENST00000394633 GTF3C6Q969F1 213 aa21.68■■□□□ 1.06
PCDHA1-202ENST00000394633 PGBD1Q96JS3 809 aa21.68■■□□□ 1.06
PCDHA1-202ENST00000394633 METTL22Q9BUU2 404 aaPredicted RBP21.68■■□□□ 1.06
PCDHA1-202ENST00000394633 COPRSQ9NQ92 184 aa21.68■■□□□ 1.06
PCDHA1-202ENST00000394633 CCDC9Q9Y3X0 531 aaKnown RBP21.68■■□□□ 1.06
PCDHA1-202ENST00000394633 PTGS1P23219 599 aa21.68■■□□□ 1.06
PCDHA1-202ENST00000394633 KRT32Q14532 448 aa21.68■■□□□ 1.06
PCDHA1-202ENST00000394633 COPS6Q7L5N1 327 aa21.68■■□□□ 1.06
PCDHA1-202ENST00000394633 ZNF609O15014 1411 aa21.68■■□□□ 1.06
PCDHA1-202ENST00000394633 TNS2Q63HR2 1409 aa21.67■■□□□ 1.06
PCDHA1-202ENST00000394633 RFX5P48382 616 aaPredicted RBP21.67■■□□□ 1.06
PCDHA1-202ENST00000394633 NEK1Q96PY6 1258 aa21.67■■□□□ 1.06
PCDHA1-202ENST00000394633 NDUFB9Q9Y6M9 179 aa21.67■■□□□ 1.06
PCDHA1-202ENST00000394633 SPATA31A6Q5VVP1 1343 aa21.67■■□□□ 1.06
PCDHA1-202ENST00000394633 CHGBP05060 677 aa21.67■■□□□ 1.06
PCDHA1-202ENST00000394633 RESTQ13127 1097 aa21.67■■□□□ 1.06
PCDHA1-202ENST00000394633 TNNI3KQ59H18 835 aa21.67■■□□□ 1.06
PCDHA1-202ENST00000394633 FPGT-TNNI3KV9GXZ4 949 aa21.67■■□□□ 1.06
PCDHA1-202ENST00000394633 NR1I2O75469 434 aa21.66■■□□□ 1.06
PCDHA1-202ENST00000394633 PTPN12Q05209 780 aaKnown RBP21.66■■□□□ 1.06
PCDHA1-202ENST00000394633 TFCP2Q12800 502 aa21.66■■□□□ 1.06
PCDHA1-202ENST00000394633 CCDC129Q6ZRS4 1044 aa21.66■■□□□ 1.06
PCDHA1-202ENST00000394633 KIF3AQ9Y496 699 aa21.66■■□□□ 1.06
PCDHA1-202ENST00000394633 EP400Q96L91 3159 aa21.66■■□□□ 1.06
PCDHA1-202ENST00000394633 ARFGEF2Q9Y6D5 1785 aa21.66■■□□□ 1.06
PCDHA1-202ENST00000394633 FAM177BA6PVY3 158 aa21.65■■□□□ 1.06
PCDHA1-202ENST00000394633 ERVV-2B6SEH9 535 aa21.65■■□□□ 1.06
PCDHA1-202ENST00000394633 Q6ZUG5 572 aa21.65■■□□□ 1.06
PCDHA1-202ENST00000394633 BRF1Q92994 677 aa21.65■■□□□ 1.06
PCDHA1-202ENST00000394633 SEC62Q99442 399 aaKnown RBP21.65■■□□□ 1.06
PCDHA1-202ENST00000394633 CCDC94Q9BW85 323 aaPredicted RBP21.65■■□□□ 1.06
PCDHA1-202ENST00000394633 RFX7Q2KHR2 1363 aa21.65■■□□□ 1.06
PCDHA1-202ENST00000394633 PAPPAQ13219 1627 aa21.64■■□□□ 1.06
PCDHA1-202ENST00000394633 TTC5Q8N0Z6 440 aa21.64■■□□□ 1.06
PCDHA1-202ENST00000394633 ITGB4P16144 1822 aa21.64■■□□□ 1.06
PCDHA1-202ENST00000394633 UBR2Q8IWV8 1755 aa21.64■■□□□ 1.05
PCDHA1-202ENST00000394633 EXOC5O00471 708 aa21.64■■□□□ 1.05
PCDHA1-202ENST00000394633 BICD2Q8TD16 824 aa21.64■■□□□ 1.05
PCDHA1-202ENST00000394633 U3KPZ7 1027 aaPredicted RBP21.64■■□□□ 1.05
PCDHA1-202ENST00000394633 CYP21A2P08686 494 aa21.63■■□□□ 1.05
PCDHA1-202ENST00000394633 LRP10Q7Z4F1 713 aa21.63■■□□□ 1.05
PCDHA1-202ENST00000394633 FNBP4Q8N3X1 1017 aaPredicted RBP21.63■■□□□ 1.05
PCDHA1-202ENST00000394633 TDRD7Q8NHU6 1098 aaKnown RBP21.63■■□□□ 1.05
PCDHA1-202ENST00000394633 ANKRD13DQ6ZTN6 518 aa21.63■■□□□ 1.05
PCDHA1-202ENST00000394633 CCDC186Q7Z3E2 898 aa21.63■■□□□ 1.05
PCDHA1-202ENST00000394633 PLA2G4DQ86XP0 818 aa21.63■■□□□ 1.05
PCDHA1-202ENST00000394633 DDX11Q96FC9 970 aa21.63■■□□□ 1.05
PCDHA1-202ENST00000394633 DNAJC2Q99543 621 aaKnown RBP21.63■■□□□ 1.05
PCDHA1-202ENST00000394633 BCL2L12Q9HB09 334 aa21.63■■□□□ 1.05
PCDHA1-202ENST00000394633 THRAP3Q9Y2W1 955 aaKnown RBP21.63■■□□□ 1.05
PCDHA1-202ENST00000394633 RIOK3O14730 519 aaKnown RBP21.62■■□□□ 1.05
PCDHA1-202ENST00000394633 HSP90B1P14625 803 aaKnown RBP21.62■■□□□ 1.05
PCDHA1-202ENST00000394633 ZNF75DP51815 510 aa21.62■■□□□ 1.05
PCDHA1-202ENST00000394633 DBNDD2Q9BQY9 259 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms