RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 PAG1Q9NWQ8 432 aa23.03■■□□□ 1.28
CLDND1-203ENST00000394181 DDX60Q8IY21 1712 aaKnown RBP23.02■■□□□ 1.28
CLDND1-203ENST00000394181 HIP1O00291 1037 aa23.02■■□□□ 1.28
CLDND1-203ENST00000394181 NFKBIBQ15653 356 aa23.02■■□□□ 1.28
CLDND1-203ENST00000394181 GORABQ5T7V8 394 aa23.02■■□□□ 1.28
CLDND1-203ENST00000394181 SEC62Q99442 399 aaKnown RBP23.02■■□□□ 1.28
CLDND1-203ENST00000394181 ZPR1O75312 459 aa23.01■■□□□ 1.27
CLDND1-203ENST00000394181 ANAPC15P60006 121 aa23.01■■□□□ 1.27
CLDND1-203ENST00000394181 CCDC24Q8N4L8 307 aa23.01■■□□□ 1.27
CLDND1-203ENST00000394181 UPF3BQ9BZI7 483 aaKnown RBP23.01■■□□□ 1.27
CLDND1-203ENST00000394181 SNX14Q9Y5W7 946 aa23.01■■□□□ 1.27
CLDND1-203ENST00000394181 BRWD3Q6RI45 1802 aa23.01■■□□□ 1.27
CLDND1-203ENST00000394181 EPB41L2O43491 1005 aaKnown RBP23.01■■□□□ 1.27
CLDND1-203ENST00000394181 PDE8BO95263 885 aa23.01■■□□□ 1.27
CLDND1-203ENST00000394181 KBTBD3Q8NAB2 608 aa23.01■■□□□ 1.27
CLDND1-203ENST00000394181 COL4A1P02462 1669 aa23.01■■□□□ 1.27
CLDND1-203ENST00000394181 CCDC152Q4G0S7 254 aa23■■□□□ 1.27
CLDND1-203ENST00000394181 PI16Q6UXB8 463 aa23■■□□□ 1.27
CLDND1-203ENST00000394181 IL17RAQ96F46 866 aa23■■□□□ 1.27
CLDND1-203ENST00000394181 CCDC171Q6TFL3 1326 aa23■■□□□ 1.27
CLDND1-203ENST00000394181 TAF5LO75529 589 aa23■■□□□ 1.27
CLDND1-203ENST00000394181 DDIT3P35638 169 aa23■■□□□ 1.27
CLDND1-203ENST00000394181 TTC39AQ5SRH9 613 aa23■■□□□ 1.27
CLDND1-203ENST00000394181 TAF1LQ8IZX4 1826 aa23■■□□□ 1.27
CLDND1-203ENST00000394181 ST18O60284 1047 aa22.99■■□□□ 1.27
CLDND1-203ENST00000394181 FKBP4Q02790 459 aaKnown RBP eCLIP22.99■■□□□ 1.27
CLDND1-203ENST00000394181 CCDC158Q5M9N0 1113 aa22.99■■□□□ 1.27
CLDND1-203ENST00000394181 CCDC129Q6ZRS4 1044 aa22.99■■□□□ 1.27
CLDND1-203ENST00000394181 PRPF40BQ6NWY9 871 aaKnown RBP22.99■■□□□ 1.27
CLDND1-203ENST00000394181 SETDB2Q96T68 719 aa22.99■■□□□ 1.27
CLDND1-203ENST00000394181 MED23Q9ULK4 1368 aa22.98■■□□□ 1.27
CLDND1-203ENST00000394181 C4BP0C0L5 1744 aa22.98■■□□□ 1.27
CLDND1-203ENST00000394181 MPHOSPH8Q99549 860 aa22.98■■□□□ 1.27
CLDND1-203ENST00000394181 ABCC12Q96J65 1359 aa22.98■■□□□ 1.27
CLDND1-203ENST00000394181 SCN7AQ01118 1682 aa22.98■■□□□ 1.27
CLDND1-203ENST00000394181 FRAT2O75474 233 aaPredicted RBP22.97■■□□□ 1.27
CLDND1-203ENST00000394181 TRAPPC3LQ5T215 181 aa22.97■■□□□ 1.27
CLDND1-203ENST00000394181 MAP4K1Q92918 833 aa22.97■■□□□ 1.27
CLDND1-203ENST00000394181 RFC4P35249 363 aa22.97■■□□□ 1.27
CLDND1-203ENST00000394181 NECTIN1Q15223 517 aa22.97■■□□□ 1.27
CLDND1-203ENST00000394181 RBM8AQ9Y5S9 174 aaKnown RBP22.97■■□□□ 1.27
CLDND1-203ENST00000394181 HSP90AA1P07900 732 aaKnown RBP22.96■■□□□ 1.27
CLDND1-203ENST00000394181 GTF2E1P29083 439 aaPredicted RBP22.96■■□□□ 1.27
CLDND1-203ENST00000394181 MROH5Q6ZUA9 1318 aa22.96■■□□□ 1.27
CLDND1-203ENST00000394181 LRP5O75197 1615 aa22.96■■□□□ 1.27
CLDND1-203ENST00000394181 ZAP70P43403 619 aa22.96■■□□□ 1.27
CLDND1-203ENST00000394181 RBM6P78332 1123 aaKnown RBP22.96■■□□□ 1.27
CLDND1-203ENST00000394181 NOL8Q76FK4 1167 aaKnown RBP22.96■■□□□ 1.27
CLDND1-203ENST00000394181 NBPF5PQ86XG9 351 aaPredicted RBP22.96■■□□□ 1.27
CLDND1-203ENST00000394181 PROM2Q8N271 834 aa22.96■■□□□ 1.27
CLDND1-203ENST00000394181 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.96■■□□□ 1.27
CLDND1-203ENST00000394181 CPA1P15085 419 aa22.95■■□□□ 1.26
CLDND1-203ENST00000394181 FGFR2P21802 821 aa22.95■■□□□ 1.26
CLDND1-203ENST00000394181 ADCK5Q3MIX3 580 aa22.95■■□□□ 1.26
CLDND1-203ENST00000394181 RTL9Q8NET4 1388 aa22.94■■□□□ 1.26
CLDND1-203ENST00000394181 RGL2O15211 777 aa22.94■■□□□ 1.26
CLDND1-203ENST00000394181 MCAMP43121 646 aa22.94■■□□□ 1.26
CLDND1-203ENST00000394181 CHMP5Q9NZZ3 219 aa22.94■■□□□ 1.26
CLDND1-203ENST00000394181 TAF6LQ9Y6J9 622 aa22.94■■□□□ 1.26
CLDND1-203ENST00000394181 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.94■■□□□ 1.26
CLDND1-203ENST00000394181 WTIPA6NIX2 430 aaPredicted RBP22.94■■□□□ 1.26
CLDND1-203ENST00000394181 HSP90B1P14625 803 aaKnown RBP22.94■■□□□ 1.26
CLDND1-203ENST00000394181 PHKA1P46020 1223 aa22.94■■□□□ 1.26
CLDND1-203ENST00000394181 COL9A3Q14050 684 aaPredicted RBP22.94■■□□□ 1.26
CLDND1-203ENST00000394181 SLC10A5Q5PT55 438 aa22.94■■□□□ 1.26
CLDND1-203ENST00000394181 IGHMBP2P38935 993 aaKnown RBP22.93■■□□□ 1.26
CLDND1-203ENST00000394181 SF3B3Q15393 1217 aaKnown RBP22.93■■□□□ 1.26
CLDND1-203ENST00000394181 PUM3Q15397 648 aaKnown RBP22.93■■□□□ 1.26
CLDND1-203ENST00000394181 MCMDC2Q4G0Z9 681 aa22.93■■□□□ 1.26
CLDND1-203ENST00000394181 CREB3L3Q68CJ9 461 aa22.93■■□□□ 1.26
CLDND1-203ENST00000394181 ZNF772Q68DY9 489 aaPredicted RBP22.93■■□□□ 1.26
CLDND1-203ENST00000394181 KCNB2Q92953 911 aa22.93■■□□□ 1.26
CLDND1-203ENST00000394181 RFX7Q2KHR2 1363 aa22.92■■□□□ 1.26
CLDND1-203ENST00000394181 KCNJ4P48050 445 aa22.92■■□□□ 1.26
CLDND1-203ENST00000394181 CCDC102BQ68D86 513 aa22.92■■□□□ 1.26
CLDND1-203ENST00000394181 LPIN2Q92539 896 aa22.92■■□□□ 1.26
CLDND1-203ENST00000394181 LAMB2P55268 1798 aa22.92■■□□□ 1.26
CLDND1-203ENST00000394181 CHRNDQ07001 517 aa22.91■■□□□ 1.26
CLDND1-203ENST00000394181 SLC27A2O14975 620 aa22.91■■□□□ 1.26
CLDND1-203ENST00000394181 NFIXQ14938 502 aa22.91■■□□□ 1.26
CLDND1-203ENST00000394181 CELF1Q92879 486 aaKnown RBP22.91■■□□□ 1.26
CLDND1-203ENST00000394181 TMX3Q96JJ7 454 aa22.91■■□□□ 1.26
CLDND1-203ENST00000394181 LARP6Q9BRS8 491 aaKnown RBP22.91■■□□□ 1.26
CLDND1-203ENST00000394181 TAF1P21675 1872 aa22.9■■□□□ 1.26
CLDND1-203ENST00000394181 RNF113AO15541 343 aaKnown RBP22.9■■□□□ 1.26
CLDND1-203ENST00000394181 ZMYM1Q5SVZ6 1142 aa22.9■■□□□ 1.26
CLDND1-203ENST00000394181 ZGPATQ8N5A5 531 aaKnown RBP22.9■■□□□ 1.26
CLDND1-203ENST00000394181 NYXQ9GZU5 481 aa22.9■■□□□ 1.26
CLDND1-203ENST00000394181 C4AP0C0L4 1744 aa22.9■■□□□ 1.26
CLDND1-203ENST00000394181 VPS53Q5VIR6 699 aa22.9■■□□□ 1.26
CLDND1-203ENST00000394181 TPTE2Q6XPS3 522 aa22.9■■□□□ 1.26
CLDND1-203ENST00000394181 SPEF2Q9C093 1822 aa22.89■■□□□ 1.26
CLDND1-203ENST00000394181 CASTP20810 708 aaKnown RBP22.89■■□□□ 1.26
CLDND1-203ENST00000394181 SLC27A3Q5K4L6 730 aa22.89■■□□□ 1.26
CLDND1-203ENST00000394181 JAKMIP1Q96N16 626 aaKnown RBP22.89■■□□□ 1.26
CLDND1-203ENST00000394181 CDC5LQ99459 802 aaKnown RBP22.89■■□□□ 1.26
CLDND1-203ENST00000394181 CYP2E1P05181 493 aaPredicted RBP22.89■■□□□ 1.25
CLDND1-203ENST00000394181 TXNRD1Q16881 649 aa22.89■■□□□ 1.25
CLDND1-203ENST00000394181 TTC14Q96N46 770 aa22.89■■□□□ 1.25
CLDND1-203ENST00000394181 M0R2C6 588 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms