RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 K7ELQ4 463 aaPredicted RBP18.1■□□□□ 0.49
MKS1-202ENST00000393119 VGLL2Q8N8G2 317 aa18.1■□□□□ 0.49
MKS1-202ENST00000393119 RTCBQ9Y3I0 505 aaKnown RBP18.1■□□□□ 0.49
MKS1-202ENST00000393119 AK9Q5TCS8 1911 aa18.1■□□□□ 0.49
MKS1-202ENST00000393119 NHSQ6T4R5 1651 aa18.09■□□□□ 0.49
MKS1-202ENST00000393119 IFIT1P09914 478 aaKnown RBP18.09■□□□□ 0.49
MKS1-202ENST00000393119 HSPA4P34932 840 aa18.09■□□□□ 0.49
MKS1-202ENST00000393119 PARP10Q53GL7 1025 aa18.09■□□□□ 0.49
MKS1-202ENST00000393119 GORABQ5T7V8 394 aa18.09■□□□□ 0.49
MKS1-202ENST00000393119 PRPF40BQ6NWY9 871 aaKnown RBP18.09■□□□□ 0.49
MKS1-202ENST00000393119 RAD50Q92878 1312 aa18.09■□□□□ 0.49
MKS1-202ENST00000393119 GPR108Q9NPR9 543 aa18.09■□□□□ 0.49
MKS1-202ENST00000393119 NARFQ9UHQ1 456 aa18.09■□□□□ 0.49
MKS1-202ENST00000393119 SNX14Q9Y5W7 946 aa18.09■□□□□ 0.49
MKS1-202ENST00000393119 ATP2B3Q16720 1220 aa18.08■□□□□ 0.48
MKS1-202ENST00000393119 ADCK5Q3MIX3 580 aa18.08■□□□□ 0.48
MKS1-202ENST00000393119 KIAA1211Q6ZU35 1233 aa18.08■□□□□ 0.48
MKS1-202ENST00000393119 PROM2Q8N271 834 aa18.08■□□□□ 0.48
MKS1-202ENST00000393119 PAG1Q9NWQ8 432 aa18.08■□□□□ 0.48
MKS1-202ENST00000393119 ZNF652Q9Y2D9 606 aa18.08■□□□□ 0.48
MKS1-202ENST00000393119 ABCC12Q96J65 1359 aa18.08■□□□□ 0.48
MKS1-202ENST00000393119 ZPR1O75312 459 aa18.08■□□□□ 0.48
MKS1-202ENST00000393119 RC3H1Q5TC82 1133 aaKnown RBP18.08■□□□□ 0.48
MKS1-202ENST00000393119 ZAP70P43403 619 aa18.07■□□□□ 0.48
MKS1-202ENST00000393119 CLEC4GQ6UXB4 293 aa18.07■□□□□ 0.48
MKS1-202ENST00000393119 GTF2E1P29083 439 aaPredicted RBP18.06■□□□□ 0.48
MKS1-202ENST00000393119 TTC39AQ5SRH9 613 aa18.06■□□□□ 0.48
MKS1-202ENST00000393119 PDE8BO95263 885 aa18.06■□□□□ 0.48
MKS1-202ENST00000393119 AK7Q96M32 723 aa18.06■□□□□ 0.48
MKS1-202ENST00000393119 SBF2Q86WG5 1849 aa18.06■□□□□ 0.48
MKS1-202ENST00000393119 A0A0G2JLW4 131 aa18.05■□□□□ 0.48
MKS1-202ENST00000393119 PHKA1P46020 1223 aa18.05■□□□□ 0.48
MKS1-202ENST00000393119 VPS53Q5VIR6 699 aa18.05■□□□□ 0.48
MKS1-202ENST00000393119 ZGPATQ8N5A5 531 aaKnown RBP18.05■□□□□ 0.48
MKS1-202ENST00000393119 RBM8AQ9Y5S9 174 aaKnown RBP18.05■□□□□ 0.48
MKS1-202ENST00000393119 CCDC171Q6TFL3 1326 aa18.05■□□□□ 0.48
MKS1-202ENST00000393119 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.05■□□□□ 0.48
MKS1-202ENST00000393119 HSP90AA1P07900 732 aaKnown RBP18.05■□□□□ 0.48
MKS1-202ENST00000393119 RFC4P35249 363 aa18.05■□□□□ 0.48
MKS1-202ENST00000393119 MCAMP43121 646 aa18.05■□□□□ 0.48
MKS1-202ENST00000393119 KBTBD3Q8NAB2 608 aa18.05■□□□□ 0.48
MKS1-202ENST00000393119 RUFY2Q8WXA3 655 aa18.05■□□□□ 0.48
MKS1-202ENST00000393119 SETDB2Q96T68 719 aa18.05■□□□□ 0.48
MKS1-202ENST00000393119 MPHOSPH8Q99549 860 aa18.05■□□□□ 0.48
MKS1-202ENST00000393119 CICQ96RK0 1608 aaPredicted RBP18.04■□□□□ 0.48
MKS1-202ENST00000393119 BRWD3Q6RI45 1802 aa18.04■□□□□ 0.48
MKS1-202ENST00000393119 MCCP23508 829 aa18.04■□□□□ 0.48
MKS1-202ENST00000393119 CCDC152Q4G0S7 254 aa18.04■□□□□ 0.48
MKS1-202ENST00000393119 TRAPPC3LQ5T215 181 aa18.04■□□□□ 0.48
MKS1-202ENST00000393119 CELF1Q92879 486 aaKnown RBP18.04■□□□□ 0.48
MKS1-202ENST00000393119 AKAP2Q9Y2D5 859 aa18.04■□□□□ 0.48
MKS1-202ENST00000393119 CCDC158Q5M9N0 1113 aa18.04■□□□□ 0.48
MKS1-202ENST00000393119 NBPF5PQ86XG9 351 aaPredicted RBP18.04■□□□□ 0.48
MKS1-202ENST00000393119 TAF1P21675 1872 aa18.03■□□□□ 0.48
MKS1-202ENST00000393119 DDIT3P35638 169 aa18.03■□□□□ 0.48
MKS1-202ENST00000393119 NECTIN1Q15223 517 aa18.03■□□□□ 0.48
MKS1-202ENST00000393119 TCEANC2Q96MN5 208 aa18.03■□□□□ 0.48
MKS1-202ENST00000393119 IQSEC3Q9UPP2 1182 aaPredicted RBP18.03■□□□□ 0.48
MKS1-202ENST00000393119 DDX60Q8IY21 1712 aaKnown RBP18.03■□□□□ 0.48
MKS1-202ENST00000393119 KCNJ4P48050 445 aa18.02■□□□□ 0.48
MKS1-202ENST00000393119 MAP4K1Q92918 833 aa18.02■□□□□ 0.48
MKS1-202ENST00000393119 FBXO3Q9UK99 471 aa18.02■□□□□ 0.48
MKS1-202ENST00000393119 MED23Q9ULK4 1368 aa18.02■□□□□ 0.48
MKS1-202ENST00000393119 ST18O60284 1047 aa18.02■□□□□ 0.47
MKS1-202ENST00000393119 EIF5BO60841 1220 aaKnown RBP18.02■□□□□ 0.47
MKS1-202ENST00000393119 CHRNDQ07001 517 aa18.02■□□□□ 0.47
MKS1-202ENST00000393119 PKP1Q13835 747 aa18.02■□□□□ 0.47
MKS1-202ENST00000393119 CCDC102BQ68D86 513 aa18.02■□□□□ 0.47
MKS1-202ENST00000393119 FGFR2P21802 821 aa18.01■□□□□ 0.47
MKS1-202ENST00000393119 NFIXQ14938 502 aa18.01■□□□□ 0.47
MKS1-202ENST00000393119 CREB3L3Q68CJ9 461 aa18.01■□□□□ 0.47
MKS1-202ENST00000393119 MYH3P11055 1940 aa18.01■□□□□ 0.47
MKS1-202ENST00000393119 M0R2C6 588 aa18.01■□□□□ 0.47
MKS1-202ENST00000393119 CASTP20810 708 aaKnown RBP18.01■□□□□ 0.47
MKS1-202ENST00000393119 BCAMP50895 628 aa18.01■□□□□ 0.47
MKS1-202ENST00000393119 RBM6P78332 1123 aaKnown RBP18.01■□□□□ 0.47
MKS1-202ENST00000393119 TMX3Q96JJ7 454 aa18.01■□□□□ 0.47
MKS1-202ENST00000393119 RGS17Q9UGC6 210 aaPredicted RBP18.01■□□□□ 0.47
MKS1-202ENST00000393119 BCORQ6W2J9 1755 aa18■□□□□ 0.47
MKS1-202ENST00000393119 SLC27A2O14975 620 aa18■□□□□ 0.47
MKS1-202ENST00000393119 CYP2E1P05181 493 aaPredicted RBP18■□□□□ 0.47
MKS1-202ENST00000393119 IGHMBP2P38935 993 aaKnown RBP18■□□□□ 0.47
MKS1-202ENST00000393119 OSBP2Q969R2 916 aa18■□□□□ 0.47
MKS1-202ENST00000393119 JAKMIP1Q96N16 626 aaKnown RBP18■□□□□ 0.47
MKS1-202ENST00000393119 C4BP0C0L5 1744 aa18■□□□□ 0.47
MKS1-202ENST00000393119 HIP1O00291 1037 aa17.99■□□□□ 0.47
MKS1-202ENST00000393119 ANAPC15P60006 121 aa17.99■□□□□ 0.47
MKS1-202ENST00000393119 TXNRD1Q16881 649 aa17.99■□□□□ 0.47
MKS1-202ENST00000393119 FAM43AQ8N2R8 423 aa17.99■□□□□ 0.47
MKS1-202ENST00000393119 PIH1D3Q9NQM4 214 aaKnown RBP17.99■□□□□ 0.47
MKS1-202ENST00000393119 LY75O60449 1722 aa17.99■□□□□ 0.47
MKS1-202ENST00000393119 PUM3Q15397 648 aaKnown RBP17.99■□□□□ 0.47
MKS1-202ENST00000393119 MCMDC2Q4G0Z9 681 aa17.99■□□□□ 0.47
MKS1-202ENST00000393119 ZNF831Q5JPB2 1677 aa17.99■□□□□ 0.47
MKS1-202ENST00000393119 NPHP1O15259 732 aa17.98■□□□□ 0.47
MKS1-202ENST00000393119 MROH5Q6ZUA9 1318 aa17.98■□□□□ 0.47
MKS1-202ENST00000393119 KLRK1P26718 216 aa17.98■□□□□ 0.47
MKS1-202ENST00000393119 LPIN2Q92539 896 aa17.98■□□□□ 0.47
MKS1-202ENST00000393119 CHMP5Q9NZZ3 219 aa17.98■□□□□ 0.47
MKS1-202ENST00000393119 MAST3O60307 1309 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms