RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 USP44Q9H0E7 712 aa16.72■□□□□ 0.27
ZNF541-203ENST00000391901 VAT1LQ9HCJ6 419 aa16.72■□□□□ 0.27
ZNF541-203ENST00000391901 ARHGEF10O15013 1369 aa16.72■□□□□ 0.27
ZNF541-203ENST00000391901 PREX2Q70Z35 1606 aa16.72■□□□□ 0.27
ZNF541-203ENST00000391901 BAG3O95817 575 aa16.72■□□□□ 0.27
ZNF541-203ENST00000391901 APOBRQ0VD83 1088 aa16.72■□□□□ 0.27
ZNF541-203ENST00000391901 ERCC6L2Q5T890 1561 aa16.72■□□□□ 0.27
ZNF541-203ENST00000391901 TOM1O60784 492 aa16.72■□□□□ 0.27
ZNF541-203ENST00000391901 SMARCC1Q92922 1105 aaPredicted RBP16.72■□□□□ 0.27
ZNF541-203ENST00000391901 INTS4Q96HW7 963 aaKnown RBP16.72■□□□□ 0.27
ZNF541-203ENST00000391901 DYNC1I1O14576 645 aa16.71■□□□□ 0.27
ZNF541-203ENST00000391901 MYOM2P54296 1465 aa16.71■□□□□ 0.27
ZNF541-203ENST00000391901 PRDM15P57071 1507 aaPredicted RBP16.71■□□□□ 0.27
ZNF541-203ENST00000391901 A0A1B0GUL7 405 aa16.71■□□□□ 0.27
ZNF541-203ENST00000391901 EYA2O00167 538 aa16.71■□□□□ 0.27
ZNF541-203ENST00000391901 CCDC129Q6ZRS4 1044 aa16.71■□□□□ 0.27
ZNF541-203ENST00000391901 RUFY3Q7L099 469 aa16.71■□□□□ 0.27
ZNF541-203ENST00000391901 ZNF594Q96JF6 807 aaPredicted RBP16.71■□□□□ 0.27
ZNF541-203ENST00000391901 DTNBO60941 627 aa16.71■□□□□ 0.27
ZNF541-203ENST00000391901 SYT1P21579 422 aa16.71■□□□□ 0.27
ZNF541-203ENST00000391901 PTPN14Q15678 1187 aa16.71■□□□□ 0.27
ZNF541-203ENST00000391901 STX1AQ16623 288 aa16.71■□□□□ 0.27
ZNF541-203ENST00000391901 FAM227BQ96M60 508 aa16.71■□□□□ 0.27
ZNF541-203ENST00000391901 NDUFB9Q9Y6M9 179 aa16.71■□□□□ 0.27
ZNF541-203ENST00000391901 CRNKL1Q9BZJ0 848 aaKnown RBP16.7■□□□□ 0.26
ZNF541-203ENST00000391901 ZKSCAN5Q9Y2L8 839 aa16.7■□□□□ 0.26
ZNF541-203ENST00000391901 EPB41L2O43491 1005 aaKnown RBP16.7■□□□□ 0.26
ZNF541-203ENST00000391901 TOP1P11387 765 aaKnown RBP16.7■□□□□ 0.26
ZNF541-203ENST00000391901 CALRP27797 417 aaKnown RBP16.7■□□□□ 0.26
ZNF541-203ENST00000391901 GCKRQ14397 625 aa16.7■□□□□ 0.26
ZNF541-203ENST00000391901 TNNI3KQ59H18 835 aa16.7■□□□□ 0.26
ZNF541-203ENST00000391901 ODF2Q5BJF6 829 aa16.7■□□□□ 0.26
ZNF541-203ENST00000391901 FPGT-TNNI3KV9GXZ4 949 aa16.7■□□□□ 0.26
ZNF541-203ENST00000391901 SGSM2O43147 1006 aa16.7■□□□□ 0.26
ZNF541-203ENST00000391901 NAA16Q6N069 864 aaPredicted RBP16.7■□□□□ 0.26
ZNF541-203ENST00000391901 DHX32Q7L7V1 743 aaKnown RBP16.7■□□□□ 0.26
ZNF541-203ENST00000391901 MIGA1Q8NAN2 632 aa16.7■□□□□ 0.26
ZNF541-203ENST00000391901 TRERF1Q96PN7 1200 aa16.7■□□□□ 0.26
ZNF541-203ENST00000391901 KAT14Q9H8E8 782 aa16.7■□□□□ 0.26
ZNF541-203ENST00000391901 KIF5BP33176 963 aa16.7■□□□□ 0.26
ZNF541-203ENST00000391901 ARHGAP29Q52LW3 1261 aa16.7■□□□□ 0.26
ZNF541-203ENST00000391901 ESR2Q92731 530 aa16.7■□□□□ 0.26
ZNF541-203ENST00000391901 KRT23Q9C075 422 aa16.7■□□□□ 0.26
ZNF541-203ENST00000391901 SLF2Q8IX21 1173 aa16.69■□□□□ 0.26
ZNF541-203ENST00000391901 TRMT1Q9NXH9 659 aaKnown RBP16.69■□□□□ 0.26
ZNF541-203ENST00000391901 RAD50Q92878 1312 aa16.69■□□□□ 0.26
ZNF541-203ENST00000391901 SPTY2D1Q68D10 685 aaPredicted RBP16.69■□□□□ 0.26
ZNF541-203ENST00000391901 CCDC102BQ68D86 513 aa16.69■□□□□ 0.26
ZNF541-203ENST00000391901 GIGYF1O75420 1035 aaPredicted RBP16.69■□□□□ 0.26
ZNF541-203ENST00000391901 HMGB2P26583 209 aaKnown RBP16.69■□□□□ 0.26
ZNF541-203ENST00000391901 RTL1A6NKG5 1358 aa16.68■□□□□ 0.26
ZNF541-203ENST00000391901 MARCKSP29966 332 aaPredicted RBP16.68■□□□□ 0.26
ZNF541-203ENST00000391901 RTN1Q16799 776 aa16.68■□□□□ 0.26
ZNF541-203ENST00000391901 PRR36Q9H6K5 1346 aa16.68■□□□□ 0.26
ZNF541-203ENST00000391901 GSPT1P15170 499 aaKnown RBP16.68■□□□□ 0.26
ZNF541-203ENST00000391901 DNAJC10Q8IXB1 793 aa16.68■□□□□ 0.26
ZNF541-203ENST00000391901 CPLX3Q8WVH0 158 aa16.68■□□□□ 0.26
ZNF541-203ENST00000391901 KIF2AO00139 706 aaPredicted RBP16.68■□□□□ 0.26
ZNF541-203ENST00000391901 TMEM132AQ24JP5 1023 aa16.68■□□□□ 0.26
ZNF541-203ENST00000391901 PPP4R3BQ5MIZ7 849 aa16.68■□□□□ 0.26
ZNF541-203ENST00000391901 SMAP1Q8IYB5 467 aaPredicted RBP16.68■□□□□ 0.26
ZNF541-203ENST00000391901 C16orf45Q96MC5 204 aaPredicted RBP16.68■□□□□ 0.26
ZNF541-203ENST00000391901 TNNT1P13805 278 aa16.67■□□□□ 0.26
ZNF541-203ENST00000391901 HS1BP3Q53T59 392 aa16.67■□□□□ 0.26
ZNF541-203ENST00000391901 MAGEB6Q8N7X4 407 aa16.67■□□□□ 0.26
ZNF541-203ENST00000391901 CCDC191Q8NCU4 936 aa16.67■□□□□ 0.26
ZNF541-203ENST00000391901 TSPYL1Q9H0U9 437 aa16.67■□□□□ 0.26
ZNF541-203ENST00000391901 ROBO2Q9HCK4 1378 aa16.67■□□□□ 0.26
ZNF541-203ENST00000391901 SYKP43405 635 aa16.67■□□□□ 0.26
ZNF541-203ENST00000391901 SYCP1Q15431 976 aa16.67■□□□□ 0.26
ZNF541-203ENST00000391901 CNNM2Q9H8M5 875 aa16.67■□□□□ 0.26
ZNF541-203ENST00000391901 LUC7LQ9NQ29 371 aaKnown RBP16.67■□□□□ 0.26
ZNF541-203ENST00000391901 PTPDC1A2A3K4 754 aa16.67■□□□□ 0.26
ZNF541-203ENST00000391901 RXRAP19793 462 aa16.67■□□□□ 0.26
ZNF541-203ENST00000391901 SNX14Q9Y5W7 946 aa16.67■□□□□ 0.26
ZNF541-203ENST00000391901 IFIT1BQ5T764 474 aaKnown RBP16.67■□□□□ 0.26
ZNF541-203ENST00000391901 KIF18AQ8NI77 898 aa16.67■□□□□ 0.26
ZNF541-203ENST00000391901 ERCC4Q92889 916 aaPredicted RBP16.67■□□□□ 0.26
ZNF541-203ENST00000391901 PRIMPOLQ96LW4 560 aa16.67■□□□□ 0.26
ZNF541-203ENST00000391901 ANO6Q4KMQ2 910 aa16.66■□□□□ 0.26
ZNF541-203ENST00000391901 TMC6Q7Z403 805 aa16.66■□□□□ 0.26
ZNF541-203ENST00000391901 TMTC2Q8N394 836 aa16.66■□□□□ 0.26
ZNF541-203ENST00000391901 UBXN4Q92575 508 aa16.66■□□□□ 0.26
ZNF541-203ENST00000391901 ZNF830Q96NB3 372 aaPredicted RBP16.66■□□□□ 0.26
ZNF541-203ENST00000391901 CALCOCO1Q9P1Z2 691 aa16.66■□□□□ 0.26
ZNF541-203ENST00000391901 ZCCHC11Q5TAX3 1644 aaKnown RBP16.66■□□□□ 0.26
ZNF541-203ENST00000391901 FAM135BQ49AJ0 1406 aa16.66■□□□□ 0.26
ZNF541-203ENST00000391901 AATKQ6ZMQ8 1374 aa16.66■□□□□ 0.26
ZNF541-203ENST00000391901 SPDYE4A6NLX3 237 aa16.66■□□□□ 0.26
ZNF541-203ENST00000391901 ITGA6P23229 1130 aa16.66■□□□□ 0.26
ZNF541-203ENST00000391901 UBA7P41226 1012 aa16.66■□□□□ 0.26
ZNF541-203ENST00000391901 MRPS27Q92552 414 aaKnown RBP16.66■□□□□ 0.26
ZNF541-203ENST00000391901 ZNF622Q969S3 477 aaKnown RBP eCLIP16.66■□□□□ 0.26
ZNF541-203ENST00000391901 SYNMO15061 1565 aa16.66■□□□□ 0.26
ZNF541-203ENST00000391901 IRX3P78415 501 aaPredicted RBP16.65■□□□□ 0.26
ZNF541-203ENST00000391901 TPTE2Q6XPS3 522 aa16.65■□□□□ 0.26
ZNF541-203ENST00000391901 KCNG4Q8TDN1 519 aa16.65■□□□□ 0.26
ZNF541-203ENST00000391901 JAG2Q9Y219 1238 aa16.65■□□□□ 0.26
ZNF541-203ENST00000391901 EFCAB6Q5THR3 1501 aa16.65■□□□□ 0.26
ZNF541-203ENST00000391901 SSH3Q8TE77 659 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms