RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 CARMIL3Q8ND23 1372 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 NCKAP5LQ9HCH0 1330 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 A0A087WWV3 80 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 ERICH4A6NGS2 130 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 TRIM6-TRIM34B2RNG4 842 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 H3BQF6 201 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 KIF2AO00139 706 aaPredicted RBP4.06□□□□□ -1.76
TRAV39-201ENST00000390466 WASLO00401 505 aaPredicted RBP4.06□□□□□ -1.76
TRAV39-201ENST00000390466 SLC27A2O14975 620 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 SKILP12757 684 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 MLECQ14165 292 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 CAMK4Q16566 473 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 STX1AQ16623 288 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 MTHFSDQ2M296 383 aaKnown RBP4.06□□□□□ -1.76
TRAV39-201ENST00000390466 NBPF6Q5VWK0 638 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 USPL1Q5W0Q7 1092 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 CREB3L3Q68CJ9 461 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 SULT6B1Q6IMI4 303 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 LARP1Q6PKG0 1096 aaKnown RBP4.06□□□□□ -1.76
TRAV39-201ENST00000390466 NUTM1Q86Y26 1132 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 MSL3Q8N5Y2 521 aaKnown RBP4.06□□□□□ -1.76
TRAV39-201ENST00000390466 RGS22Q8NE09 1264 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 MAP4K1Q92918 833 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 GTF3C6Q969F1 213 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 SMARCE1Q969G3 411 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 RILPL2Q969X0 211 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 SIRT1Q96EB6 747 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 NBPF4Q96M43 638 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 JAKMIP1Q96N16 626 aaKnown RBP4.06□□□□□ -1.76
TRAV39-201ENST00000390466 NOL10Q9BSC4 688 aaKnown RBP4.06□□□□□ -1.76
TRAV39-201ENST00000390466 TRIM34Q9BYJ4 488 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 TRIM5Q9C035 493 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 SCAND2PQ9GZW5 306 aaPredicted RBP4.06□□□□□ -1.76
TRAV39-201ENST00000390466 TSPYL1Q9H0U9 437 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 TNMDQ9H2S6 317 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 TMX1Q9H3N1 280 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 PDRG1Q9NUG6 133 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 CLIP2Q9UDT6 1046 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 RCOR1Q9UKL0 485 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 SPG7Q9UQ90 795 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 RBM8AQ9Y5S9 174 aaKnown RBP4.06□□□□□ -1.76
TRAV39-201ENST00000390466 PARP3Q9Y6F1 533 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 UBR2Q8IWV8 1755 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 ARAP2Q8WZ64 1704 aa4.06□□□□□ -1.76
TRAV39-201ENST00000390466 MYH3P11055 1940 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 OVOS2A0A0G2JMS6 1433 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 ZNF609O15014 1411 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 ANKARQ7Z5J8 1434 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 FLT4P35916 1363 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 ROBO2Q9HCK4 1378 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 HEG1Q9ULI3 1381 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 ZC3H4Q9UPT8 1303 aaKnown RBP4.05□□□□□ -1.76
TRAV39-201ENST00000390466 TIAM2Q8IVF5 1701 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 A0A0D9SFI3 127 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 VPS37CA5D8V6 355 aaPredicted RBP4.05□□□□□ -1.76
TRAV39-201ENST00000390466 MAP2K7O14733 419 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 TRIM66O15016 1216 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 SOX12O15370 315 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 ATP8B1O43520 1251 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 JAK2O60674 1132 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 GLRX3O76003 335 aaKnown RBP4.05□□□□□ -1.76
TRAV39-201ENST00000390466 SEC31AO94979 1220 aaKnown RBP4.05□□□□□ -1.76
TRAV39-201ENST00000390466 CTDNEP1O95476 244 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 CPP00450 1065 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 RPS6KB1P23443 525 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 ETF1P62495 437 aaKnown RBP4.05□□□□□ -1.76
TRAV39-201ENST00000390466 NMIQ13287 307 aaPredicted RBP4.05□□□□□ -1.76
TRAV39-201ENST00000390466 BMS1Q14692 1282 aaKnown RBP4.05□□□□□ -1.76
TRAV39-201ENST00000390466 PTPN14Q15678 1187 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 TPD52L1Q16890 204 aaPredicted RBP4.05□□□□□ -1.76
TRAV39-201ENST00000390466 CCDC158Q5M9N0 1113 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 CC2D1AQ6P1N0 951 aaPredicted RBP4.05□□□□□ -1.76
TRAV39-201ENST00000390466 SYT10Q6XYQ8 523 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 PPP1R42Q7Z4L9 355 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 WAPLQ7Z5K2 1190 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 FERMT3Q86UX7 667 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 BRF1Q92994 677 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 KIFC2Q96AC6 838 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 SPATA32Q96LK8 384 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 BPIFA3Q9BQP9 254 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 FUT8Q9BYC5 575 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 AGXT2Q9BYV1 514 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 EFCC1Q9HA90 598 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 INTS13Q9NVM9 706 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 MIS18AQ9NYP9 233 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 IMPACTQ9P2X3 320 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 TFIP11Q9UBB9 837 aaKnown RBP4.05□□□□□ -1.76
TRAV39-201ENST00000390466 DNAI1Q9UI46 699 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 LRP6O75581 1613 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 NHSL1Q5SYE7 1610 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 SLIT3O75094 1523 aa4.05□□□□□ -1.76
TRAV39-201ENST00000390466 A0A1B0GUL6 1792 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 PALLDQ8WX93 1383 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 MROH7-TTC4A0A0A0MT08 1334 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 UTYO14607 1347 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 PAPPAQ13219 1627 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 MYH7BA7E2Y1 1941 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 MYH4Q9Y623 1939 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 PLEKHG3A1L390 1219 aa4.04□□□□□ -1.76
TRAV39-201ENST00000390466 VWA3AA6NCI4 1184 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms