RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 SLC4A8Q2Y0W8 1093 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 PPP4R3BQ5MIZ7 849 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 CPLX3Q8WVH0 158 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 CLIP2Q9UDT6 1046 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 KDM5AP29375 1690 aaKnown RBP17.13■□□□□ 0.33
SNPH-202ENST00000381873 PRKCSHP14314 528 aaPredicted RBP17.13■□□□□ 0.33
SNPH-202ENST00000381873 RBM25P49756 843 aaKnown RBP17.13■□□□□ 0.33
SNPH-202ENST00000381873 GNAQP50148 359 aa17.13■□□□□ 0.33
SNPH-202ENST00000381873 TAF3Q5VWG9 929 aa17.13■□□□□ 0.33
SNPH-202ENST00000381873 NAA16Q6N069 864 aaPredicted RBP17.13■□□□□ 0.33
SNPH-202ENST00000381873 TPTE2Q6XPS3 522 aa17.13■□□□□ 0.33
SNPH-202ENST00000381873 ZSCAN16Q9H4T2 348 aaPredicted RBP17.13■□□□□ 0.33
SNPH-202ENST00000381873 PPFIA3O75145 1194 aa17.13■□□□□ 0.33
SNPH-202ENST00000381873 LIG1P18858 919 aa17.13■□□□□ 0.33
SNPH-202ENST00000381873 PAFAH1B1P43034 410 aa17.13■□□□□ 0.33
SNPH-202ENST00000381873 CABLES1Q8TDN4 633 aa17.13■□□□□ 0.33
SNPH-202ENST00000381873 CNNM2Q9H8M5 875 aa17.13■□□□□ 0.33
SNPH-202ENST00000381873 NUCB1Q02818 461 aa17.13■□□□□ 0.33
SNPH-202ENST00000381873 HDAC9Q9UKV0 1011 aa17.13■□□□□ 0.33
SNPH-202ENST00000381873 NFATC2IPQ8NCF5 419 aa17.12■□□□□ 0.33
SNPH-202ENST00000381873 DCAF5Q96JK2 942 aa17.12■□□□□ 0.33
SNPH-202ENST00000381873 UQCRHLA0A096LP55 91 aa17.12■□□□□ 0.33
SNPH-202ENST00000381873 URI1O94763 535 aaPredicted RBP17.12■□□□□ 0.33
SNPH-202ENST00000381873 UQCRHP07919 91 aa17.12■□□□□ 0.33
SNPH-202ENST00000381873 SLC9C2Q5TAH2 1124 aa17.12■□□□□ 0.33
SNPH-202ENST00000381873 CDC42BPAQ5VT25 1732 aa17.12■□□□□ 0.33
SNPH-202ENST00000381873 LRRC27Q9C0I9 530 aa17.12■□□□□ 0.33
SNPH-202ENST00000381873 TSPY3P0CV98 308 aa17.12■□□□□ 0.33
SNPH-202ENST00000381873 TSPY8P0CW00 308 aa17.12■□□□□ 0.33
SNPH-202ENST00000381873 SLC4A4Q9Y6R1 1079 aa17.12■□□□□ 0.33
SNPH-202ENST00000381873 ZNF165P49910 485 aa17.12■□□□□ 0.33
SNPH-202ENST00000381873 UTP14AQ9BVJ6 771 aaKnown RBP17.12■□□□□ 0.33
SNPH-202ENST00000381873 ZC3H12CQ9C0D7 883 aaKnown RBP17.12■□□□□ 0.33
SNPH-202ENST00000381873 MTHFSDQ2M296 383 aaKnown RBP17.11■□□□□ 0.33
SNPH-202ENST00000381873 MCMDC2Q4G0Z9 681 aa17.11■□□□□ 0.33
SNPH-202ENST00000381873 LUZP1Q86V48 1076 aa17.11■□□□□ 0.33
SNPH-202ENST00000381873 IQGAP3Q86VI3 1631 aa17.11■□□□□ 0.33
SNPH-202ENST00000381873 CAVIN2O95810 425 aa17.11■□□□□ 0.33
SNPH-202ENST00000381873 BMP15O95972 392 aa17.11■□□□□ 0.33
SNPH-202ENST00000381873 USP25Q9UHP3 1055 aa17.11■□□□□ 0.33
SNPH-202ENST00000381873 MAP3K19Q56UN5 1328 aa17.11■□□□□ 0.33
SNPH-202ENST00000381873 ERCC6L2Q5T890 1561 aa17.11■□□□□ 0.33
SNPH-202ENST00000381873 HSPA2P54652 639 aa17.11■□□□□ 0.33
SNPH-202ENST00000381873 ANAPC15P60006 121 aa17.11■□□□□ 0.33
SNPH-202ENST00000381873 DZIP3Q86Y13 1208 aaKnown RBP17.11■□□□□ 0.33
SNPH-202ENST00000381873 RNF123Q5XPI4 1314 aa17.1■□□□□ 0.33
SNPH-202ENST00000381873 PCDH11XQ9BZA7 1347 aa17.1■□□□□ 0.33
SNPH-202ENST00000381873 PCDH11YQ9BZA8 1340 aa17.1■□□□□ 0.33
SNPH-202ENST00000381873 STX1AQ16623 288 aa17.1■□□□□ 0.33
SNPH-202ENST00000381873 SYCP3Q8IZU3 236 aa17.1■□□□□ 0.33
SNPH-202ENST00000381873 ZRANB1Q9UGI0 708 aa17.1■□□□□ 0.33
SNPH-202ENST00000381873 RBM8AQ9Y5S9 174 aaKnown RBP17.1■□□□□ 0.33
SNPH-202ENST00000381873 ABCC3O15438 1527 aa17.1■□□□□ 0.33
SNPH-202ENST00000381873 IFIT1BQ5T764 474 aaKnown RBP17.1■□□□□ 0.33
SNPH-202ENST00000381873 TBC1D32Q96NH3 1257 aa17.1■□□□□ 0.33
SNPH-202ENST00000381873 NYXQ9GZU5 481 aa17.1■□□□□ 0.33
SNPH-202ENST00000381873 MACROD2A1Z1Q3 448 aa17.1■□□□□ 0.33
SNPH-202ENST00000381873 NEMFO60524 1076 aa17.1■□□□□ 0.33
SNPH-202ENST00000381873 TMCO3Q6UWJ1 677 aa17.1■□□□□ 0.33
SNPH-202ENST00000381873 MPHOSPH6Q99547 160 aaKnown RBP17.1■□□□□ 0.33
SNPH-202ENST00000381873 PCDHB15Q9Y5E8 787 aa17.1■□□□□ 0.33
SNPH-202ENST00000381873 UBE2HP62256 183 aa17.1■□□□□ 0.33
SNPH-202ENST00000381873 GSTTP1A0A1W2PQM5 241 aa17.09■□□□□ 0.33
SNPH-202ENST00000381873 F8W031 263 aaPredicted RBP17.09■□□□□ 0.33
SNPH-202ENST00000381873 HOXB7P09629 217 aa17.09■□□□□ 0.33
SNPH-202ENST00000381873 USP8P40818 1118 aa17.09■□□□□ 0.33
SNPH-202ENST00000381873 FAM114A1Q8IWE2 563 aa17.09■□□□□ 0.33
SNPH-202ENST00000381873 MRPL50Q8N5N7 158 aaKnown RBP17.09■□□□□ 0.33
SNPH-202ENST00000381873 ERMNQ8TAM6 284 aa17.09■□□□□ 0.33
SNPH-202ENST00000381873 GSDMDP57764 484 aa17.09■□□□□ 0.33
SNPH-202ENST00000381873 TMX3Q96JJ7 454 aa17.09■□□□□ 0.33
SNPH-202ENST00000381873 LMTK3Q96Q04 1460 aa17.09■□□□□ 0.33
SNPH-202ENST00000381873 KIF1BO60333 1816 aa17.09■□□□□ 0.33
SNPH-202ENST00000381873 KDM5CP41229 1560 aa17.09■□□□□ 0.33
SNPH-202ENST00000381873 RTN1Q16799 776 aa17.09■□□□□ 0.33
SNPH-202ENST00000381873 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.09■□□□□ 0.33
SNPH-202ENST00000381873 RTCBQ9Y3I0 505 aaKnown RBP17.09■□□□□ 0.33
SNPH-202ENST00000381873 TCEANC2Q96MN5 208 aa17.09■□□□□ 0.33
SNPH-202ENST00000381873 UGGT1Q9NYU2 1555 aa17.08■□□□□ 0.33
SNPH-202ENST00000381873 PDCL2Q8N4E4 241 aa17.08■□□□□ 0.33
SNPH-202ENST00000381873 NECAB1Q8N987 351 aa17.08■□□□□ 0.33
SNPH-202ENST00000381873 EYA1Q99502 592 aa17.08■□□□□ 0.33
SNPH-202ENST00000381873 ALG1Q9BT22 464 aa17.08■□□□□ 0.33
SNPH-202ENST00000381873 NSFL1CQ9UNZ2 370 aaKnown RBP17.08■□□□□ 0.33
SNPH-202ENST00000381873 TBCAO75347 108 aaKnown RBP17.08■□□□□ 0.32
SNPH-202ENST00000381873 DNA2P51530 1060 aa17.08■□□□□ 0.32
SNPH-202ENST00000381873 LRRC2Q9BYS8 371 aa17.08■□□□□ 0.32
SNPH-202ENST00000381873 MAP9Q49MG5 647 aa17.08■□□□□ 0.32
SNPH-202ENST00000381873 ZNF804AQ7Z570 1209 aa17.08■□□□□ 0.32
SNPH-202ENST00000381873 TMEM87AQ8NBN3 555 aa17.08■□□□□ 0.32
SNPH-202ENST00000381873 ESYT1Q9BSJ8 1104 aa17.08■□□□□ 0.32
SNPH-202ENST00000381873 KAT6BQ8WYB5 2073 aa17.07■□□□□ 0.32
SNPH-202ENST00000381873 ABCA9Q8IUA7 1624 aa17.07■□□□□ 0.32
SNPH-202ENST00000381873 FAM135BQ49AJ0 1406 aa17.07■□□□□ 0.32
SNPH-202ENST00000381873 DNAJC5Q9H3Z4 198 aa17.07■□□□□ 0.32
SNPH-202ENST00000381873 SYKP43405 635 aa17.07■□□□□ 0.32
SNPH-202ENST00000381873 CTNNBL1Q8WYA6 563 aaPredicted RBP17.07■□□□□ 0.32
SNPH-202ENST00000381873 HOOK3Q86VS8 718 aa17.07■□□□□ 0.32
SNPH-202ENST00000381873 PA2G4Q9UQ80 394 aaKnown RBP17.06■□□□□ 0.32
SNPH-202ENST00000381873 ATP7BP35670 1465 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms