RNA–Protein interactions for RNA: ENST00000381810.7

LITAF-202, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-202ENST00000381810 ATP2B3Q16720 1220 aa20.4■□□□□ 0.86
LITAF-202ENST00000381810 CCDC158Q5M9N0 1113 aa20.4■□□□□ 0.86
LITAF-202ENST00000381810 GORABQ5T7V8 394 aa20.4■□□□□ 0.86
LITAF-202ENST00000381810 DDX46Q7L014 1031 aaKnown RBP20.4■□□□□ 0.86
LITAF-202ENST00000381810 KCNB2Q92953 911 aa20.4■□□□□ 0.86
LITAF-202ENST00000381810 COL24A1Q17RW2 1714 aa20.4■□□□□ 0.86
LITAF-202ENST00000381810 TTC39AQ5SRH9 613 aa20.39■□□□□ 0.85
LITAF-202ENST00000381810 VGLL2Q8N8G2 317 aa20.39■□□□□ 0.85
LITAF-202ENST00000381810 NARFQ9UHQ1 456 aa20.39■□□□□ 0.85
LITAF-202ENST00000381810 ABCC12Q96J65 1359 aa20.39■□□□□ 0.85
LITAF-202ENST00000381810 GOLIM4O00461 696 aa20.38■□□□□ 0.85
LITAF-202ENST00000381810 GNPATO15228 680 aa20.38■□□□□ 0.85
LITAF-202ENST00000381810 FRAT2O75474 233 aaPredicted RBP20.38■□□□□ 0.85
LITAF-202ENST00000381810 CCDC152Q4G0S7 254 aa20.38■□□□□ 0.85
LITAF-202ENST00000381810 BCL11BQ9C0K0 894 aaPredicted RBP20.38■□□□□ 0.85
LITAF-202ENST00000381810 MROH5Q6ZUA9 1318 aa20.38■□□□□ 0.85
LITAF-202ENST00000381810 MYH7P12883 1935 aa20.38■□□□□ 0.85
LITAF-202ENST00000381810 RASEFQ8IZ41 740 aa20.37■□□□□ 0.85
LITAF-202ENST00000381810 MAP4K1Q92918 833 aa20.37■□□□□ 0.85
LITAF-202ENST00000381810 FOXD4L1Q9NU39 408 aa20.37■□□□□ 0.85
LITAF-202ENST00000381810 C4AP0C0L4 1744 aa20.37■□□□□ 0.85
LITAF-202ENST00000381810 AKAP11Q9UKA4 1901 aa20.37■□□□□ 0.85
LITAF-202ENST00000381810 PDE8BO95263 885 aa20.37■□□□□ 0.85
LITAF-202ENST00000381810 NECTIN1Q15223 517 aa20.37■□□□□ 0.85
LITAF-202ENST00000381810 PRPF40BQ6NWY9 871 aaKnown RBP20.37■□□□□ 0.85
LITAF-202ENST00000381810 BCL2L12Q9HB09 334 aa20.37■□□□□ 0.85
LITAF-202ENST00000381810 RTCBQ9Y3I0 505 aaKnown RBP20.37■□□□□ 0.85
LITAF-202ENST00000381810 RBM8AQ9Y5S9 174 aaKnown RBP20.37■□□□□ 0.85
LITAF-202ENST00000381810 ZPR1O75312 459 aa20.35■□□□□ 0.85
LITAF-202ENST00000381810 KCNJ4P48050 445 aa20.35■□□□□ 0.85
LITAF-202ENST00000381810 MCMDC2Q4G0Z9 681 aa20.35■□□□□ 0.85
LITAF-202ENST00000381810 USPL1Q5W0Q7 1092 aa20.35■□□□□ 0.85
LITAF-202ENST00000381810 TBC1D9BQ66K14 1250 aa20.35■□□□□ 0.85
LITAF-202ENST00000381810 ZNF589Q86UQ0 364 aaPredicted RBP20.35■□□□□ 0.85
LITAF-202ENST00000381810 UPF3BQ9BZI7 483 aaKnown RBP20.35■□□□□ 0.85
LITAF-202ENST00000381810 TAF5LO75529 589 aa20.34■□□□□ 0.85
LITAF-202ENST00000381810 ERFEQ4G0M1 354 aa20.34■□□□□ 0.85
LITAF-202ENST00000381810 FAM196AQ6ZSG2 479 aa20.34■□□□□ 0.85
LITAF-202ENST00000381810 SMIM5Q71RC9 77 aa20.34■□□□□ 0.85
LITAF-202ENST00000381810 MPHOSPH8Q99549 860 aa20.34■□□□□ 0.85
LITAF-202ENST00000381810 SEC31BQ9NQW1 1179 aa20.34■□□□□ 0.85
LITAF-202ENST00000381810 HELLSQ9NRZ9 838 aa20.34■□□□□ 0.85
LITAF-202ENST00000381810 SRP68Q9UHB9 627 aaKnown RBP20.34■□□□□ 0.85
LITAF-202ENST00000381810 PUM3Q15397 648 aaKnown RBP20.33■□□□□ 0.85
LITAF-202ENST00000381810 CREB3L3Q68CJ9 461 aa20.33■□□□□ 0.85
LITAF-202ENST00000381810 TMX3Q96JJ7 454 aa20.33■□□□□ 0.85
LITAF-202ENST00000381810 ZNF512BQ96KM6 892 aaPredicted RBP20.33■□□□□ 0.85
LITAF-202ENST00000381810 TM6SF1Q9BZW5 370 aa20.33■□□□□ 0.85
LITAF-202ENST00000381810 A0A1B0GUL6 1792 aa20.33■□□□□ 0.84
LITAF-202ENST00000381810 ZKSCAN1P17029 563 aaPredicted RBP20.32■□□□□ 0.84
LITAF-202ENST00000381810 IGHMBP2P38935 993 aaKnown RBP20.32■□□□□ 0.84
LITAF-202ENST00000381810 FKBP4Q02790 459 aaKnown RBP eCLIP20.32■□□□□ 0.84
LITAF-202ENST00000381810 LRRFIP1Q32MZ4 808 aaKnown RBP20.32■□□□□ 0.84
LITAF-202ENST00000381810 SLC10A5Q5PT55 438 aa20.32■□□□□ 0.84
LITAF-202ENST00000381810 BICDL1Q6ZP65 573 aa20.32■□□□□ 0.84
LITAF-202ENST00000381810 KRT27Q7Z3Y8 459 aa20.32■□□□□ 0.84
LITAF-202ENST00000381810 NYXQ9GZU5 481 aa20.32■□□□□ 0.84
LITAF-202ENST00000381810 CWC22Q9HCG8 908 aaKnown RBP20.32■□□□□ 0.84
LITAF-202ENST00000381810 SLC27A2O14975 620 aa20.32■□□□□ 0.84
LITAF-202ENST00000381810 RNF113AO15541 343 aaKnown RBP20.32■□□□□ 0.84
LITAF-202ENST00000381810 FGFR2P21802 821 aa20.32■□□□□ 0.84
LITAF-202ENST00000381810 SSFA2P28290 1259 aa20.32■□□□□ 0.84
LITAF-202ENST00000381810 RAB3GAP1Q15042 981 aa20.32■□□□□ 0.84
LITAF-202ENST00000381810 SF3B3Q15393 1217 aaKnown RBP20.32■□□□□ 0.84
LITAF-202ENST00000381810 ZMYM1Q5SVZ6 1142 aa20.32■□□□□ 0.84
LITAF-202ENST00000381810 RNF20Q5VTR2 975 aa20.32■□□□□ 0.84
LITAF-202ENST00000381810 LPIN2Q92539 896 aa20.32■□□□□ 0.84
LITAF-202ENST00000381810 ARHGEF1Q92888 912 aaKnown RBP20.32■□□□□ 0.84
LITAF-202ENST00000381810 TTC14Q96N46 770 aa20.32■□□□□ 0.84
LITAF-202ENST00000381810 SETDB2Q96T68 719 aa20.32■□□□□ 0.84
LITAF-202ENST00000381810 UBR3Q6ZT12 1888 aa20.31■□□□□ 0.84
LITAF-202ENST00000381810 CHGBP05060 677 aa20.31■□□□□ 0.84
LITAF-202ENST00000381810 CUL4AQ13619 759 aa20.31■□□□□ 0.84
LITAF-202ENST00000381810 SCARF1Q14162 830 aa20.31■□□□□ 0.84
LITAF-202ENST00000381810 JAKMIP1Q96N16 626 aaKnown RBP20.31■□□□□ 0.84
LITAF-202ENST00000381810 CDC5LQ99459 802 aaKnown RBP20.31■□□□□ 0.84
LITAF-202ENST00000381810 HMG20BQ9P0W2 317 aa20.31■□□□□ 0.84
LITAF-202ENST00000381810 SLC5A1P13866 664 aa20.3■□□□□ 0.84
LITAF-202ENST00000381810 CCDC129Q6ZRS4 1044 aa20.3■□□□□ 0.84
LITAF-202ENST00000381810 AMIGO3Q86WK7 504 aa20.3■□□□□ 0.84
LITAF-202ENST00000381810 SEC62Q99442 399 aaKnown RBP20.3■□□□□ 0.84
LITAF-202ENST00000381810 TAF1P21675 1872 aa20.3■□□□□ 0.84
LITAF-202ENST00000381810 UQCRFS1P1P0C7P4 283 aa20.29■□□□□ 0.84
LITAF-202ENST00000381810 CASTP20810 708 aaKnown RBP20.29■□□□□ 0.84
LITAF-202ENST00000381810 GTF2E1P29083 439 aaPredicted RBP20.29■□□□□ 0.84
LITAF-202ENST00000381810 ZAP70P43403 619 aa20.29■□□□□ 0.84
LITAF-202ENST00000381810 TRAPPC3LQ5T215 181 aa20.29■□□□□ 0.84
LITAF-202ENST00000381810 HELBQ8NG08 1087 aaPredicted RBP20.29■□□□□ 0.84
LITAF-202ENST00000381810 ZSWIM6Q9HCJ5 1215 aa20.29■□□□□ 0.84
LITAF-202ENST00000381810 U3KPZ7 1027 aaPredicted RBP20.29■□□□□ 0.84
LITAF-202ENST00000381810 COL4A1P02462 1669 aa20.29■□□□□ 0.84
LITAF-202ENST00000381810 RPAP1Q9BWH6 1393 aaPredicted RBP20.29■□□□□ 0.84
LITAF-202ENST00000381810 ZFYP08048 801 aaPredicted RBP20.28■□□□□ 0.84
LITAF-202ENST00000381810 ADCK5Q3MIX3 580 aa20.28■□□□□ 0.84
LITAF-202ENST00000381810 C3orf67Q6ZVT6 689 aa20.28■□□□□ 0.84
LITAF-202ENST00000381810 LRRC4BQ9NT99 713 aa20.28■□□□□ 0.84
LITAF-202ENST00000381810 CYP46A1Q9Y6A2 500 aa20.28■□□□□ 0.84
LITAF-202ENST00000381810 MYO5AQ9Y4I1 1855 aaKnown RBP20.28■□□□□ 0.84
LITAF-202ENST00000381810 ADRA2BP18089 450 aa20.27■□□□□ 0.84
LITAF-202ENST00000381810 PSMA5P28066 241 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms