RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 DPCR1Q3MIW9 517 aa14.15□□□□□ -0.14
HERC6-203ENST00000380265 CFAP100Q494V2 611 aa14.15□□□□□ -0.14
HERC6-203ENST00000380265 AK7Q96M32 723 aa14.15□□□□□ -0.14
HERC6-203ENST00000380265 CWC15Q9P013 229 aaKnown RBP14.15□□□□□ -0.14
HERC6-203ENST00000380265 ORC3Q9UBD5 711 aaPredicted RBP14.15□□□□□ -0.14
HERC6-203ENST00000380265 ERBB3P21860 1342 aa14.15□□□□□ -0.14
HERC6-203ENST00000380265 GOLGA8FQ08AF8 430 aa14.14□□□□□ -0.15
HERC6-203ENST00000380265 GOLGA8DPQ0D2H9 430 aa14.14□□□□□ -0.15
HERC6-203ENST00000380265 AIMP1Q12904 312 aaKnown RBP14.14□□□□□ -0.15
HERC6-203ENST00000380265 ARMCX5Q6P1M9 558 aa14.14□□□□□ -0.15
HERC6-203ENST00000380265 NGDNQ8NEJ9 315 aaKnown RBP14.14□□□□□ -0.15
HERC6-203ENST00000380265 ABCA9Q8IUA7 1624 aa14.14□□□□□ -0.15
HERC6-203ENST00000380265 SMC1AQ14683 1233 aaKnown RBP14.14□□□□□ -0.15
HERC6-203ENST00000380265 HSP90AA4PQ58FG1 418 aa14.14□□□□□ -0.15
HERC6-203ENST00000380265 CCDC129Q6ZRS4 1044 aa14.14□□□□□ -0.15
HERC6-203ENST00000380265 IL17REQ8NFR9 667 aa14.14□□□□□ -0.15
HERC6-203ENST00000380265 TLR7Q9NYK1 1049 aaKnown RBP14.14□□□□□ -0.15
HERC6-203ENST00000380265 POLR3DP05423 398 aaPredicted RBP14.13□□□□□ -0.15
HERC6-203ENST00000380265 CWF19L2Q2TBE0 894 aaKnown RBP14.13□□□□□ -0.15
HERC6-203ENST00000380265 MRPS27Q92552 414 aaKnown RBP14.13□□□□□ -0.15
HERC6-203ENST00000380265 ARHGEF10O15013 1369 aa14.13□□□□□ -0.15
HERC6-203ENST00000380265 GNG11P61952 73 aa14.13□□□□□ -0.15
HERC6-203ENST00000380265 FAM193AP78312 1265 aa14.13□□□□□ -0.15
HERC6-203ENST00000380265 KRT32Q14532 448 aa14.13□□□□□ -0.15
HERC6-203ENST00000380265 EAF2Q96CJ1 260 aaPredicted RBP14.13□□□□□ -0.15
HERC6-203ENST00000380265 L2HGDHQ9H9P8 463 aa14.13□□□□□ -0.15
HERC6-203ENST00000380265 NCOA5Q9HCD5 579 aaKnown RBP14.13□□□□□ -0.15
HERC6-203ENST00000380265 IMPACTQ9P2X3 320 aa14.13□□□□□ -0.15
HERC6-203ENST00000380265 FRMPD1Q5SYB0 1578 aa14.13□□□□□ -0.15
HERC6-203ENST00000380265 PTPDC1A2A3K4 754 aa14.13□□□□□ -0.15
HERC6-203ENST00000380265 TRIM66O15016 1216 aa14.13□□□□□ -0.15
HERC6-203ENST00000380265 CCP110O43303 1012 aa14.13□□□□□ -0.15
HERC6-203ENST00000380265 TULP2O00295 520 aa14.12□□□□□ -0.15
HERC6-203ENST00000380265 SLC3A2P08195 630 aaKnown RBP14.12□□□□□ -0.15
HERC6-203ENST00000380265 SKIDA1Q1XH10 827 aa14.12□□□□□ -0.15
HERC6-203ENST00000380265 KLHDC4Q8TBB5 520 aa14.12□□□□□ -0.15
HERC6-203ENST00000380265 SEC62Q99442 399 aaKnown RBP14.12□□□□□ -0.15
HERC6-203ENST00000380265 ARFGAP3Q9NP61 516 aa14.12□□□□□ -0.15
HERC6-203ENST00000380265 PRR36Q9H6K5 1346 aa14.12□□□□□ -0.15
HERC6-203ENST00000380265 PSDA5PKW4 1024 aaPredicted RBP14.12□□□□□ -0.15
HERC6-203ENST00000380265 APOBRQ0VD83 1088 aa14.12□□□□□ -0.15
HERC6-203ENST00000380265 BEND3Q5T5X7 828 aa14.12□□□□□ -0.15
HERC6-203ENST00000380265 FAM53CQ9NYF3 392 aa14.12□□□□□ -0.15
HERC6-203ENST00000380265 HMG20BQ9P0W2 317 aa14.12□□□□□ -0.15
HERC6-203ENST00000380265 IRX3P78415 501 aaPredicted RBP14.12□□□□□ -0.15
HERC6-203ENST00000380265 SCRN1Q12765 414 aa14.12□□□□□ -0.15
HERC6-203ENST00000380265 NBPF11Q86T75 865 aa14.12□□□□□ -0.15
HERC6-203ENST00000380265 MAP3K2Q9Y2U5 619 aa14.12□□□□□ -0.15
HERC6-203ENST00000380265 OTUD7BQ6GQQ9 843 aa14.11□□□□□ -0.15
HERC6-203ENST00000380265 CHST3Q7LGC8 479 aa14.11□□□□□ -0.15
HERC6-203ENST00000380265 OSBPL5Q9H0X9 879 aaPredicted RBP14.11□□□□□ -0.15
HERC6-203ENST00000380265 PIK3C2BO00750 1634 aa14.11□□□□□ -0.15
HERC6-203ENST00000380265 LEKR1Q6ZMV7 388 aa14.11□□□□□ -0.15
HERC6-203ENST00000380265 RCOR1Q9UKL0 485 aa14.11□□□□□ -0.15
HERC6-203ENST00000380265 ALKQ9UM73 1620 aa14.11□□□□□ -0.15
HERC6-203ENST00000380265 CASQ1P31415 396 aa14.11□□□□□ -0.15
HERC6-203ENST00000380265 UBASH3AP57075 661 aa14.11□□□□□ -0.15
HERC6-203ENST00000380265 MCM6Q14566 821 aa14.11□□□□□ -0.15
HERC6-203ENST00000380265 HECW2Q9P2P5 1572 aa14.11□□□□□ -0.15
HERC6-203ENST00000380265 TPM1P09493 284 aa14.1□□□□□ -0.15
HERC6-203ENST00000380265 NLRP6P59044 892 aa14.1□□□□□ -0.15
HERC6-203ENST00000380265 NDUFA8P51970 172 aa14.1□□□□□ -0.15
HERC6-203ENST00000380265 FANCCQ00597 558 aa14.1□□□□□ -0.15
HERC6-203ENST00000380265 KCNB2Q92953 911 aa14.1□□□□□ -0.15
HERC6-203ENST00000380265 TOP1P11387 765 aaKnown RBP14.1□□□□□ -0.15
HERC6-203ENST00000380265 ATP1A3P13637 1013 aa14.1□□□□□ -0.15
HERC6-203ENST00000380265 PCDHA7Q9UN72 937 aa14.1□□□□□ -0.15
HERC6-203ENST00000380265 MYO1CO00159 1063 aa14.09□□□□□ -0.15
HERC6-203ENST00000380265 LRRFIP1Q32MZ4 808 aaKnown RBP14.09□□□□□ -0.15
HERC6-203ENST00000380265 GOLGA6L1Q8N7Z2 621 aa14.09□□□□□ -0.15
HERC6-203ENST00000380265 KIAA1468Q9P260 1216 aa14.09□□□□□ -0.15
HERC6-203ENST00000380265 FAM69CQ0P6D2 419 aa14.09□□□□□ -0.15
HERC6-203ENST00000380265 SYNE3Q6ZMZ3 975 aa14.09□□□□□ -0.15
HERC6-203ENST00000380265 RAB11FIP4Q86YS3 637 aa14.09□□□□□ -0.15
HERC6-203ENST00000380265 SRRTQ9BXP5 876 aaKnown RBP14.09□□□□□ -0.15
HERC6-203ENST00000380265 KCNQ3O43525 872 aa14.09□□□□□ -0.15
HERC6-203ENST00000380265 GIGYF1O75420 1035 aaPredicted RBP14.09□□□□□ -0.15
HERC6-203ENST00000380265 CHGBP05060 677 aa14.09□□□□□ -0.15
HERC6-203ENST00000380265 EFCAB8A8MWE9 144 aa14.08□□□□□ -0.15
HERC6-203ENST00000380265 ZSCAN12O43309 604 aa14.08□□□□□ -0.15
HERC6-203ENST00000380265 TAF5LO75529 589 aa14.08□□□□□ -0.15
HERC6-203ENST00000380265 SLC20A2Q08357 652 aa14.08□□□□□ -0.15
HERC6-203ENST00000380265 VPS18Q9P253 973 aa14.08□□□□□ -0.15
HERC6-203ENST00000380265 HDAC5Q9UQL6 1122 aa14.08□□□□□ -0.15
HERC6-203ENST00000380265 TADA3O75528 432 aa14.08□□□□□ -0.16
HERC6-203ENST00000380265 PPP2R3AQ06190 1150 aa14.08□□□□□ -0.16
HERC6-203ENST00000380265 CCDC93Q567U6 631 aa14.08□□□□□ -0.16
HERC6-203ENST00000380265 KARSQ15046 597 aaKnown RBP14.08□□□□□ -0.16
HERC6-203ENST00000380265 LCMT1Q9UIC8 334 aa14.08□□□□□ -0.16
HERC6-203ENST00000380265 SASH3O75995 380 aa14.07□□□□□ -0.16
HERC6-203ENST00000380265 ZRANB2O95218 330 aaKnown RBP eCLIP14.07□□□□□ -0.16
HERC6-203ENST00000380265 CCDC158Q5M9N0 1113 aa14.07□□□□□ -0.16
HERC6-203ENST00000380265 CC2D1AQ6P1N0 951 aaPredicted RBP14.07□□□□□ -0.16
HERC6-203ENST00000380265 DDX46Q7L014 1031 aaKnown RBP14.07□□□□□ -0.16
HERC6-203ENST00000380265 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.07□□□□□ -0.16
HERC6-203ENST00000380265 METP08581 1390 aa14.07□□□□□ -0.16
HERC6-203ENST00000380265 SASH1O94885 1247 aa14.07□□□□□ -0.16
HERC6-203ENST00000380265 NSUN7Q8NE18 718 aaKnown RBP14.07□□□□□ -0.16
HERC6-203ENST00000380265 SIGLEC1Q9BZZ2 1709 aa14.07□□□□□ -0.16
HERC6-203ENST00000380265 MLH3Q9UHC1 1453 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms