RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 FAM89AQ96GI7 184 aa9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 SLC4A9Q96Q91 983 aa9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 WDR33Q9C0J8 1336 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-204ENST00000380176 EYA2O00167 538 aa9.53□□□□□ -0.88
PDLIM5-204ENST00000380176 CDK11BP21127 795 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-204ENST00000380176 PLCD3Q8N3E9 789 aa9.53□□□□□ -0.88
PDLIM5-204ENST00000380176 RRAGDQ9NQL2 400 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-204ENST00000380176 SMC3Q9UQE7 1217 aa9.53□□□□□ -0.88
PDLIM5-204ENST00000380176 STX6O43752 255 aa9.53□□□□□ -0.88
PDLIM5-204ENST00000380176 GJB2P29033 226 aa9.53□□□□□ -0.88
PDLIM5-204ENST00000380176 FAM43AQ8N2R8 423 aa9.53□□□□□ -0.88
PDLIM5-204ENST00000380176 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-204ENST00000380176 GOLIM4O00461 696 aa9.52□□□□□ -0.88
PDLIM5-204ENST00000380176 ZSCAN22P10073 491 aaPredicted RBP9.52□□□□□ -0.88
PDLIM5-204ENST00000380176 IL15P40933 162 aaPredicted RBP9.52□□□□□ -0.88
PDLIM5-204ENST00000380176 PRIM1P49642 420 aaKnown RBP9.52□□□□□ -0.88
PDLIM5-204ENST00000380176 HLFQ16534 295 aa9.52□□□□□ -0.88
PDLIM5-204ENST00000380176 USP48Q86UV5 1035 aa9.52□□□□□ -0.88
PDLIM5-204ENST00000380176 DISP2A7MBM2 1401 aa9.52□□□□□ -0.88
PDLIM5-204ENST00000380176 A0A1B0GUL7 405 aa9.52□□□□□ -0.89
PDLIM5-204ENST00000380176 DSG3P32926 999 aa9.52□□□□□ -0.89
PDLIM5-204ENST00000380176 USPL1Q5W0Q7 1092 aa9.52□□□□□ -0.89
PDLIM5-204ENST00000380176 KBTBD3Q8NAB2 608 aa9.52□□□□□ -0.89
PDLIM5-204ENST00000380176 ROBO1Q9Y6N7 1651 aa9.52□□□□□ -0.89
PDLIM5-204ENST00000380176 RAD21O60216 631 aa9.52□□□□□ -0.89
PDLIM5-204ENST00000380176 RPS6KB1P23443 525 aa9.52□□□□□ -0.89
PDLIM5-204ENST00000380176 COL16A1Q07092 1604 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-204ENST00000380176 TOB2Q14106 344 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-204ENST00000380176 LAMA4Q16363 1823 aa9.52□□□□□ -0.89
PDLIM5-204ENST00000380176 RNF20Q5VTR2 975 aa9.52□□□□□ -0.89
PDLIM5-204ENST00000380176 BLOC1S2Q6QNY1 142 aa9.52□□□□□ -0.89
PDLIM5-204ENST00000380176 CNPY2Q9Y2B0 182 aa9.52□□□□□ -0.89
PDLIM5-204ENST00000380176 COL14A1Q05707 1796 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-204ENST00000380176 BCL9O00512 1426 aa9.51□□□□□ -0.89
PDLIM5-204ENST00000380176 SYCE3A1L190 88 aa9.51□□□□□ -0.89
PDLIM5-204ENST00000380176 GPTP24298 496 aa9.51□□□□□ -0.89
PDLIM5-204ENST00000380176 PSMA5P28066 241 aa9.51□□□□□ -0.89
PDLIM5-204ENST00000380176 MCMDC2Q4G0Z9 681 aa9.51□□□□□ -0.89
PDLIM5-204ENST00000380176 SYTL4Q96C24 671 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-204ENST00000380176 ZSCAN31Q96LW9 406 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-204ENST00000380176 RBSNQ9H1K0 784 aa9.51□□□□□ -0.89
PDLIM5-204ENST00000380176 GPR108Q9NPR9 543 aa9.51□□□□□ -0.89
PDLIM5-204ENST00000380176 PAG1Q9NWQ8 432 aa9.51□□□□□ -0.89
PDLIM5-204ENST00000380176 NASPP49321 788 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-204ENST00000380176 KIF6Q6ZMV9 814 aa9.51□□□□□ -0.89
PDLIM5-204ENST00000380176 SH2B1Q9NRF2 756 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-204ENST00000380176 STARD3NLO95772 234 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 F13A1P00488 732 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 CYP21A2P08686 494 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 TRIM28Q13263 835 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 CCDC57Q2TAC2 916 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 TSGA10IPQ3SY00 556 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 MTMR6Q9Y217 621 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 RFX7Q2KHR2 1363 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 MAP3K15Q6ZN16 1313 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 A0A0G2JLW4 131 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 CIAO1O76071 339 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 PCCAP05165 728 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 CYP19A1P11511 503 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 ADORA1P30542 326 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 CCDC82Q8N4S0 544 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 TEX13AQ9BXU3 409 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 ZBTB1Q9Y2K1 713 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 NUP98P52948 1817 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 PALLDQ8WX93 1383 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 IFIT1P09914 478 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 STK3Q13188 491 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 GIGYF2Q6Y7W6 1299 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 ZBTB38Q8NAP3 1195 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 HMG20BQ9P0W2 317 aa9.5□□□□□ -0.89
PDLIM5-204ENST00000380176 EXOC5O00471 708 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 MBD3O95983 291 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 CSF1RP07333 972 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 STOX1Q6ZVD7 989 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 CEP126Q9P2H0 1117 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 MTMR7Q9Y216 660 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 SH3TC1Q8TE82 1336 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 WNK3Q9BYP7 1800 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 SCARF1Q14162 830 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 LRSAM1Q6UWE0 723 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 NLRP10Q86W26 655 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 NEK1Q96PY6 1258 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 LRP6O75581 1613 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 ANKRD36CQ5JPF3 1778 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 MYH3P11055 1940 aa9.49□□□□□ -0.89
PDLIM5-204ENST00000380176 PLCH1Q4KWH8 1693 aa9.48□□□□□ -0.89
PDLIM5-204ENST00000380176 VPS37CA5D8V6 355 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-204ENST00000380176 XAGE2Q96GT9 111 aa9.48□□□□□ -0.89
PDLIM5-204ENST00000380176 LRRC2Q9BYS8 371 aa9.48□□□□□ -0.89
PDLIM5-204ENST00000380176 ALDH8A1Q9H2A2 487 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-204ENST00000380176 DOT1LQ8TEK3 1739 aa9.48□□□□□ -0.89
PDLIM5-204ENST00000380176 FKBP4Q02790 459 aaKnown RBP eCLIP9.48□□□□□ -0.89
PDLIM5-204ENST00000380176 DNM1Q05193 864 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-204ENST00000380176 ZMYM1Q5SVZ6 1142 aa9.48□□□□□ -0.89
PDLIM5-204ENST00000380176 TMEM87AQ8NBN3 555 aa9.48□□□□□ -0.89
PDLIM5-204ENST00000380176 PLA2G12BQ9BX93 195 aa9.48□□□□□ -0.89
PDLIM5-204ENST00000380176 GREM2Q9H772 168 aa9.48□□□□□ -0.89
PDLIM5-204ENST00000380176 TBC1D2BQ9UPU7 963 aa9.48□□□□□ -0.89
PDLIM5-204ENST00000380176 FIBPO43427 364 aa9.47□□□□□ -0.89
PDLIM5-204ENST00000380176 IFIT5Q13325 482 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms