RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 CHD2O14647 1828 aaKnown RBP10.29□□□□□ -0.76
TRIM6-203ENST00000380107 ADAMTSL3P82987 1691 aa10.29□□□□□ -0.76
TRIM6-203ENST00000380107 LMO7Q8WWI1 1683 aa10.29□□□□□ -0.76
TRIM6-203ENST00000380107 PTPN12Q05209 780 aaKnown RBP10.29□□□□□ -0.76
TRIM6-203ENST00000380107 NEXNQ0ZGT2 675 aa10.29□□□□□ -0.76
TRIM6-203ENST00000380107 ZNF790Q6PG37 636 aa10.29□□□□□ -0.76
TRIM6-203ENST00000380107 ARHGEF25Q86VW2 580 aa10.29□□□□□ -0.76
TRIM6-203ENST00000380107 PLA2G4DQ86XP0 818 aa10.29□□□□□ -0.76
TRIM6-203ENST00000380107 ZNF496Q96IT1 587 aaPredicted RBP10.29□□□□□ -0.76
TRIM6-203ENST00000380107 GOLPH3LQ9H4A5 285 aa10.29□□□□□ -0.76
TRIM6-203ENST00000380107 TNNT1P13805 278 aa10.28□□□□□ -0.76
TRIM6-203ENST00000380107 ZSCAN20P17040 1043 aaPredicted RBP10.28□□□□□ -0.76
TRIM6-203ENST00000380107 SMAP1Q8IYB5 467 aaPredicted RBP10.28□□□□□ -0.76
TRIM6-203ENST00000380107 KCNH5Q8NCM2 988 aa10.28□□□□□ -0.76
TRIM6-203ENST00000380107 NEUROD6Q96NK8 337 aa10.28□□□□□ -0.76
TRIM6-203ENST00000380107 DDX19AQ9NUU7 478 aaKnown RBP10.28□□□□□ -0.76
TRIM6-203ENST00000380107 UTYO14607 1347 aa10.28□□□□□ -0.76
TRIM6-203ENST00000380107 HEG1Q9ULI3 1381 aa10.28□□□□□ -0.76
TRIM6-203ENST00000380107 FILIP1Q7Z7B0 1213 aa10.28□□□□□ -0.76
TRIM6-203ENST00000380107 RAB11FIP4Q86YS3 637 aa10.28□□□□□ -0.76
TRIM6-203ENST00000380107 CHMP4AQ9BY43 222 aa10.28□□□□□ -0.76
TRIM6-203ENST00000380107 SNRKQ9NRH2 765 aa10.28□□□□□ -0.76
TRIM6-203ENST00000380107 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.28□□□□□ -0.76
TRIM6-203ENST00000380107 V9GYY5 206 aaPredicted RBP10.28□□□□□ -0.76
TRIM6-203ENST00000380107 GOLIM4O00461 696 aa10.27□□□□□ -0.76
TRIM6-203ENST00000380107 CTDNEP1O95476 244 aa10.27□□□□□ -0.76
TRIM6-203ENST00000380107 TIMM10P62072 90 aa10.27□□□□□ -0.76
TRIM6-203ENST00000380107 TPD52L1Q16890 204 aaPredicted RBP10.27□□□□□ -0.76
TRIM6-203ENST00000380107 OTUD7BQ6GQQ9 843 aa10.27□□□□□ -0.76
TRIM6-203ENST00000380107 CCAR1Q8IX12 1150 aaKnown RBP10.27□□□□□ -0.76
TRIM6-203ENST00000380107 SYTL4Q96C24 671 aaPredicted RBP10.27□□□□□ -0.76
TRIM6-203ENST00000380107 GPHNQ9NQX3 736 aaPredicted RBP10.27□□□□□ -0.76
TRIM6-203ENST00000380107 NLRP2Q9NX02 1062 aa10.27□□□□□ -0.76
TRIM6-203ENST00000380107 KDM4FA0A1W2PPD8 638 aa10.27□□□□□ -0.77
TRIM6-203ENST00000380107 NCBP1Q09161 790 aaKnown RBP10.27□□□□□ -0.77
TRIM6-203ENST00000380107 ANKRD13DQ6ZTN6 518 aa10.27□□□□□ -0.77
TRIM6-203ENST00000380107 TDRD7Q8NHU6 1098 aaKnown RBP10.27□□□□□ -0.77
TRIM6-203ENST00000380107 DDX17Q92841 729 aaKnown RBP10.27□□□□□ -0.77
TRIM6-203ENST00000380107 USP28Q96RU2 1077 aa10.27□□□□□ -0.77
TRIM6-203ENST00000380107 TRMT1Q9NXH9 659 aaKnown RBP10.27□□□□□ -0.77
TRIM6-203ENST00000380107 HMG20BQ9P0W2 317 aa10.27□□□□□ -0.77
TRIM6-203ENST00000380107 RGPD5Q99666 1765 aa10.27□□□□□ -0.77
TRIM6-203ENST00000380107 A0A087WZG4 1122 aa10.26□□□□□ -0.77
TRIM6-203ENST00000380107 TPM3P06753 285 aa10.26□□□□□ -0.77
TRIM6-203ENST00000380107 ATP5JP18859 108 aa10.26□□□□□ -0.77
TRIM6-203ENST00000380107 ADD1P35611 737 aaKnown RBP10.26□□□□□ -0.77
TRIM6-203ENST00000380107 RFX5P48382 616 aaPredicted RBP10.26□□□□□ -0.77
TRIM6-203ENST00000380107 USPL1Q5W0Q7 1092 aa10.26□□□□□ -0.77
TRIM6-203ENST00000380107 TTLL5Q6EMB2 1281 aa10.26□□□□□ -0.77
TRIM6-203ENST00000380107 RBM43Q6ZSC3 357 aaKnown RBP10.26□□□□□ -0.77
TRIM6-203ENST00000380107 METTL22Q9BUU2 404 aaPredicted RBP10.26□□□□□ -0.77
TRIM6-203ENST00000380107 HDAC5Q9UQL6 1122 aa10.26□□□□□ -0.77
TRIM6-203ENST00000380107 PTPDC1A2A3K4 754 aa10.26□□□□□ -0.77
TRIM6-203ENST00000380107 GOLGA6L19H0YKK7 550 aa10.26□□□□□ -0.77
TRIM6-203ENST00000380107 MCMDC2Q4G0Z9 681 aa10.26□□□□□ -0.77
TRIM6-203ENST00000380107 LMBR1LQ6UX01 489 aa10.26□□□□□ -0.77
TRIM6-203ENST00000380107 NSUN7Q8NE18 718 aaKnown RBP10.26□□□□□ -0.77
TRIM6-203ENST00000380107 GJB4Q9NTQ9 266 aa10.26□□□□□ -0.77
TRIM6-203ENST00000380107 C5P01031 1676 aa10.26□□□□□ -0.77
TRIM6-203ENST00000380107 IQCB1Q15051 598 aa10.25□□□□□ -0.77
TRIM6-203ENST00000380107 HSP90AB3PQ58FF7 597 aa10.25□□□□□ -0.77
TRIM6-203ENST00000380107 ANKRD7Q92527 254 aa10.25□□□□□ -0.77
TRIM6-203ENST00000380107 ZNF594Q96JF6 807 aaPredicted RBP10.25□□□□□ -0.77
TRIM6-203ENST00000380107 LAMA4Q16363 1823 aa10.25□□□□□ -0.77
TRIM6-203ENST00000380107 CTIFO43310 598 aaKnown RBP10.25□□□□□ -0.77
TRIM6-203ENST00000380107 ME1P48163 572 aa10.25□□□□□ -0.77
TRIM6-203ENST00000380107 TSGA10IPQ3SY00 556 aa10.25□□□□□ -0.77
TRIM6-203ENST00000380107 SLC52A2Q9HAB3 445 aa10.25□□□□□ -0.77
TRIM6-203ENST00000380107 COPRSQ9NQ92 184 aa10.25□□□□□ -0.77
TRIM6-203ENST00000380107 JCADQ9P266 1359 aa10.25□□□□□ -0.77
TRIM6-203ENST00000380107 NPHP1O15259 732 aa10.24□□□□□ -0.77
TRIM6-203ENST00000380107 HAND2P61296 217 aa10.24□□□□□ -0.77
TRIM6-203ENST00000380107 SNW1Q13573 536 aaKnown RBP10.24□□□□□ -0.77
TRIM6-203ENST00000380107 KRT32Q14532 448 aa10.24□□□□□ -0.77
TRIM6-203ENST00000380107 U3KPZ7 1027 aaPredicted RBP10.24□□□□□ -0.77
TRIM6-203ENST00000380107 USP54Q70EL1 1684 aa10.24□□□□□ -0.77
TRIM6-203ENST00000380107 A0A1B0GVL5 298 aa10.24□□□□□ -0.77
TRIM6-203ENST00000380107 BECN2A8MW95 431 aa10.24□□□□□ -0.77
TRIM6-203ENST00000380107 POLR3DP05423 398 aaPredicted RBP10.24□□□□□ -0.77
TRIM6-203ENST00000380107 DMTNQ08495 405 aa10.24□□□□□ -0.77
TRIM6-203ENST00000380107 ILDR1Q86SU0 546 aaPredicted RBP10.24□□□□□ -0.77
TRIM6-203ENST00000380107 LRRC8AQ8IWT6 810 aa10.24□□□□□ -0.77
TRIM6-203ENST00000380107 AOPEPQ8N6M6 819 aa10.24□□□□□ -0.77
TRIM6-203ENST00000380107 FSIP1Q8NA03 581 aa10.24□□□□□ -0.77
TRIM6-203ENST00000380107 CABLES1Q8TDN4 633 aa10.24□□□□□ -0.77
TRIM6-203ENST00000380107 RAPGEF4Q8WZA2 1011 aa10.24□□□□□ -0.77
TRIM6-203ENST00000380107 CCDC85AQ96PX6 553 aaPredicted RBP10.24□□□□□ -0.77
TRIM6-203ENST00000380107 HAUS7Q99871 368 aa10.24□□□□□ -0.77
TRIM6-203ENST00000380107 ALDH8A1Q9H2A2 487 aaPredicted RBP10.24□□□□□ -0.77
TRIM6-203ENST00000380107 CFAP45Q9UL16 551 aa10.24□□□□□ -0.77
TRIM6-203ENST00000380107 BIN1O00499 593 aa10.23□□□□□ -0.77
TRIM6-203ENST00000380107 ISM2Q6H9L7 571 aa10.23□□□□□ -0.77
TRIM6-203ENST00000380107 DHX40Q8IX18 779 aaKnown RBP10.23□□□□□ -0.77
TRIM6-203ENST00000380107 FMNL2Q96PY5 1086 aa10.23□□□□□ -0.77
TRIM6-203ENST00000380107 KDM6AO15550 1401 aaPredicted RBP10.23□□□□□ -0.77
TRIM6-203ENST00000380107 PFKFB2O60825 505 aa10.23□□□□□ -0.77
TRIM6-203ENST00000380107 SKILP12757 684 aa10.23□□□□□ -0.77
TRIM6-203ENST00000380107 CHRNA2Q15822 529 aa10.23□□□□□ -0.77
TRIM6-203ENST00000380107 LRRC24Q50LG9 513 aa10.23□□□□□ -0.77
TRIM6-203ENST00000380107 DHX32Q7L7V1 743 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms