RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 IRX5P78411 483 aaPredicted RBP9.58□□□□□ -0.88
PTPRR-203ENST00000378778 PSME1Q06323 249 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 FBXO31Q5XUX0 539 aaPredicted RBP9.58□□□□□ -0.88
PTPRR-203ENST00000378778 TMCO3Q6UWJ1 677 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 DHX40Q8IX18 779 aaKnown RBP9.58□□□□□ -0.88
PTPRR-203ENST00000378778 NECAB1Q8N987 351 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 ENGASEQ8NFI3 743 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 ZNF592Q92610 1267 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 EYA1Q99502 592 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 CWC15Q9P013 229 aaKnown RBP9.58□□□□□ -0.88
PTPRR-203ENST00000378778 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.58□□□□□ -0.88
PTPRR-203ENST00000378778 DIP2BQ9P265 1576 aa9.57□□□□□ -0.88
PTPRR-203ENST00000378778 CCDC158Q5M9N0 1113 aa9.57□□□□□ -0.88
PTPRR-203ENST00000378778 CTR9Q6PD62 1173 aa9.57□□□□□ -0.88
PTPRR-203ENST00000378778 UBXN6Q9BZV1 441 aa9.57□□□□□ -0.88
PTPRR-203ENST00000378778 DNAI1Q9UI46 699 aa9.57□□□□□ -0.88
PTPRR-203ENST00000378778 FHOD1Q9Y613 1164 aa9.57□□□□□ -0.88
PTPRR-203ENST00000378778 PIK3C2AO00443 1686 aa9.57□□□□□ -0.88
PTPRR-203ENST00000378778 ANKARQ7Z5J8 1434 aa9.57□□□□□ -0.88
PTPRR-203ENST00000378778 NUTM2FA1L443 756 aa9.57□□□□□ -0.88
PTPRR-203ENST00000378778 IKBKBO14920 756 aa9.57□□□□□ -0.88
PTPRR-203ENST00000378778 PFKFB2O60825 505 aa9.57□□□□□ -0.88
PTPRR-203ENST00000378778 MAP4K4O95819 1239 aaPredicted RBP9.57□□□□□ -0.88
PTPRR-203ENST00000378778 CPA1P15085 419 aa9.57□□□□□ -0.88
PTPRR-203ENST00000378778 SFPQP23246 707 aaKnown RBP eCLIP9.57□□□□□ -0.88
PTPRR-203ENST00000378778 ETF1P62495 437 aaKnown RBP9.57□□□□□ -0.88
PTPRR-203ENST00000378778 NMIQ13287 307 aaPredicted RBP9.57□□□□□ -0.88
PTPRR-203ENST00000378778 NUTM2GQ5VZR2 741 aa9.57□□□□□ -0.88
PTPRR-203ENST00000378778 CCAR1Q8IX12 1150 aaKnown RBP9.57□□□□□ -0.88
PTPRR-203ENST00000378778 ERBB3P21860 1342 aa9.57□□□□□ -0.88
PTPRR-203ENST00000378778 FOXO3O43524 673 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 PNMA6AP0CW24 399 aaPredicted RBP9.56□□□□□ -0.88
PTPRR-203ENST00000378778 ZRSR1Q15695 479 aaKnown RBP9.56□□□□□ -0.88
PTPRR-203ENST00000378778 FERMT3Q86UX7 667 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 TXNDC2Q86VQ3 553 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 FBXL16Q8N461 479 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 BRF1Q92994 677 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 PPP1R13BQ96KQ4 1090 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 MPHOSPH8Q99549 860 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 PHRF1Q9P1Y6 1649 aaKnown RBP9.56□□□□□ -0.88
PTPRR-203ENST00000378778 UBR1Q8IWV7 1749 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 ZSCAN12O43309 604 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 AMPHP49418 695 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 TUBB2AQ13885 445 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 LRRFIP1Q32MZ4 808 aaKnown RBP9.56□□□□□ -0.88
PTPRR-203ENST00000378778 C11orf57Q6ZUT1 292 aaPredicted RBP9.56□□□□□ -0.88
PTPRR-203ENST00000378778 UBXN4Q92575 508 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 NEK1Q96PY6 1258 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 TUBB2BQ9BVA1 445 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 BCL11BQ9C0K0 894 aaPredicted RBP9.56□□□□□ -0.88
PTPRR-203ENST00000378778 EFCC1Q9HA90 598 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 TFIP11Q9UBB9 837 aaKnown RBP9.56□□□□□ -0.88
PTPRR-203ENST00000378778 COL15A1P39059 1388 aa9.56□□□□□ -0.88
PTPRR-203ENST00000378778 ADD1P35611 737 aaKnown RBP9.55□□□□□ -0.88
PTPRR-203ENST00000378778 G3BP1Q13283 466 aaKnown RBP eCLIP9.55□□□□□ -0.88
PTPRR-203ENST00000378778 ADALQ6DHV7 355 aa9.55□□□□□ -0.88
PTPRR-203ENST00000378778 IL17REQ8NFR9 667 aa9.55□□□□□ -0.88
PTPRR-203ENST00000378778 FBXO41Q8TF61 875 aa9.55□□□□□ -0.88
PTPRR-203ENST00000378778 AGXT2Q9BYV1 514 aa9.55□□□□□ -0.88
PTPRR-203ENST00000378778 ZNF446Q9NWS9 450 aa9.55□□□□□ -0.88
PTPRR-203ENST00000378778 ORC3Q9UBD5 711 aaPredicted RBP9.55□□□□□ -0.88
PTPRR-203ENST00000378778 DBF4Q9UBU7 674 aaPredicted RBP9.55□□□□□ -0.88
PTPRR-203ENST00000378778 MARF1Q9Y4F3 1742 aaKnown RBP9.55□□□□□ -0.88
PTPRR-203ENST00000378778 YEATS4O95619 227 aa9.55□□□□□ -0.88
PTPRR-203ENST00000378778 CLCN6P51797 869 aa9.55□□□□□ -0.88
PTPRR-203ENST00000378778 EIF4A1P60842 406 aaKnown RBP9.55□□□□□ -0.88
PTPRR-203ENST00000378778 E4F1Q66K89 784 aaPredicted RBP9.55□□□□□ -0.88
PTPRR-203ENST00000378778 GPR161Q8N6U8 529 aaKnown RBP9.55□□□□□ -0.88
PTPRR-203ENST00000378778 IQUBQ8NA54 791 aa9.55□□□□□ -0.88
PTPRR-203ENST00000378778 MRPS27Q92552 414 aaKnown RBP9.55□□□□□ -0.88
PTPRR-203ENST00000378778 AK7Q96M32 723 aa9.55□□□□□ -0.88
PTPRR-203ENST00000378778 RTEL1Q9NZ71 1219 aa9.55□□□□□ -0.88
PTPRR-203ENST00000378778 SPEF2Q9C093 1822 aa9.55□□□□□ -0.88
PTPRR-203ENST00000378778 USP27XA6NNY8 438 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 POTEB2H3BUK9 544 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 TAF5LO75529 589 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 NBPF7P0C2Y1 421 aaPredicted RBP9.54□□□□□ -0.88
PTPRR-203ENST00000378778 AACSQ86V21 672 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 KCNG4Q8TDN1 519 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 DDX11Q96FC9 970 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 ROBO2Q9HCK4 1378 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 TUBBP07437 444 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 NLRP12P59046 1061 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 NAA30Q147X3 362 aaPredicted RBP9.54□□□□□ -0.88
PTPRR-203ENST00000378778 KSR2Q6VAB6 950 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 ELOA2Q8IYF1 753 aaPredicted RBP9.54□□□□□ -0.88
PTPRR-203ENST00000378778 MNS1Q8NEH6 495 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 LARP6Q9BRS8 491 aaKnown RBP9.54□□□□□ -0.88
PTPRR-203ENST00000378778 FSD1Q9BTV5 496 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 CHMP3Q9Y3E7 222 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 ADAMTS13Q76LX8 1427 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 LAMA4Q16363 1823 aa9.54□□□□□ -0.88
PTPRR-203ENST00000378778 TMEM2Q9UHN6 1383 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 ATP5JP18859 108 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 PLA2G4AP47712 749 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 NBPF11Q86T75 865 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 FMR1NBQ8N0W7 255 aaPredicted RBP9.53□□□□□ -0.88
PTPRR-203ENST00000378778 LINS1Q8NG48 757 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 EXOC4Q96A65 974 aa9.53□□□□□ -0.88
PTPRR-203ENST00000378778 ZNF274Q96GC6 653 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms