RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 ZNF853P0CG23 659 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 SFPQP23246 707 aaKnown RBP eCLIP15.32■□□□□ 0.04
NPHP4-203ENST00000378169 WTAPQ15007 396 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 CRACR2BQ8N4Y2 399 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-203ENST00000378169 ALG1Q9BT22 464 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 ZSCAN16Q9H4T2 348 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-203ENST00000378169 PLEKHG1Q9ULL1 1385 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 IQGAP3Q86VI3 1631 aa15.31■□□□□ 0.04
NPHP4-203ENST00000378169 KIF1BO60333 1816 aa15.31■□□□□ 0.04
NPHP4-203ENST00000378169 TOM1O60784 492 aa15.31■□□□□ 0.04
NPHP4-203ENST00000378169 SIRT2Q8IXJ6 389 aa15.31■□□□□ 0.04
NPHP4-203ENST00000378169 EAF2Q96CJ1 260 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-203ENST00000378169 MARCKSP29966 332 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-203ENST00000378169 SF3B2Q13435 895 aaKnown RBP15.31■□□□□ 0.04
NPHP4-203ENST00000378169 DHX32Q7L7V1 743 aaKnown RBP15.31■□□□□ 0.04
NPHP4-203ENST00000378169 TANGO6Q9C0B7 1094 aa15.31■□□□□ 0.04
NPHP4-203ENST00000378169 NEURL1BA8MQ27 555 aa15.31■□□□□ 0.04
NPHP4-203ENST00000378169 PHKG2P15735 406 aa15.31■□□□□ 0.04
NPHP4-203ENST00000378169 BEND3Q5T5X7 828 aa15.31■□□□□ 0.04
NPHP4-203ENST00000378169 ZNF287Q9HBT7 754 aa15.31■□□□□ 0.04
NPHP4-203ENST00000378169 PALD1Q9ULE6 856 aa15.31■□□□□ 0.04
NPHP4-203ENST00000378169 ITGA6P23229 1130 aa15.3■□□□□ 0.04
NPHP4-203ENST00000378169 ARHGEF25Q86VW2 580 aa15.3■□□□□ 0.04
NPHP4-203ENST00000378169 TTLL7Q6ZT98 887 aa15.3■□□□□ 0.04
NPHP4-203ENST00000378169 CCDC191Q8NCU4 936 aa15.3■□□□□ 0.04
NPHP4-203ENST00000378169 TRMT1Q9NXH9 659 aaKnown RBP15.3■□□□□ 0.04
NPHP4-203ENST00000378169 CBFA2T2O43439 604 aa15.3■□□□□ 0.04
NPHP4-203ENST00000378169 MAGEB6Q8N7X4 407 aa15.3■□□□□ 0.04
NPHP4-203ENST00000378169 SEC63Q9UGP8 760 aaKnown RBP15.3■□□□□ 0.04
NPHP4-203ENST00000378169 RAD50Q92878 1312 aa15.29■□□□□ 0.04
NPHP4-203ENST00000378169 TET3O43151 1660 aa15.29■□□□□ 0.04
NPHP4-203ENST00000378169 CAGE1Q8TC20 777 aa15.29■□□□□ 0.04
NPHP4-203ENST00000378169 ATP7BP35670 1465 aa15.29■□□□□ 0.04
NPHP4-203ENST00000378169 CCDC194A0A1B0GVG4 234 aa15.29■□□□□ 0.04
NPHP4-203ENST00000378169 PTPDC1A2A3K4 754 aa15.29■□□□□ 0.04
NPHP4-203ENST00000378169 CTAGE5O15320 804 aa15.29■□□□□ 0.04
NPHP4-203ENST00000378169 HSP90AA4PQ58FG1 418 aa15.29■□□□□ 0.04
NPHP4-203ENST00000378169 NAA16Q6N069 864 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-203ENST00000378169 SLC27A2O14975 620 aa15.29■□□□□ 0.04
NPHP4-203ENST00000378169 TRPM1Q7Z4N2 1603 aa15.29■□□□□ 0.04
NPHP4-203ENST00000378169 UNC5CLQ8IV45 518 aa15.28■□□□□ 0.04
NPHP4-203ENST00000378169 CCDC24Q8N4L8 307 aa15.28■□□□□ 0.04
NPHP4-203ENST00000378169 ZNHIT6Q9NWK9 470 aaKnown RBP15.28■□□□□ 0.04
NPHP4-203ENST00000378169 C16orf45Q96MC5 204 aaPredicted RBP15.28■□□□□ 0.04
NPHP4-203ENST00000378169 NCOA5Q9HCD5 579 aaKnown RBP15.28■□□□□ 0.04
NPHP4-203ENST00000378169 CHAMP1Q96JM3 812 aa15.28■□□□□ 0.04
NPHP4-203ENST00000378169 CFAP74Q9C0B2 1584 aa15.28■□□□□ 0.04
NPHP4-203ENST00000378169 F8W031 263 aaPredicted RBP15.28■□□□□ 0.04
NPHP4-203ENST00000378169 PDE4BQ07343 736 aa15.28■□□□□ 0.04
NPHP4-203ENST00000378169 CCDC96Q2M329 555 aa15.28■□□□□ 0.04
NPHP4-203ENST00000378169 SMARCC1Q92922 1105 aaPredicted RBP15.28■□□□□ 0.04
NPHP4-203ENST00000378169 ZKSCAN3Q9BRR0 538 aa15.28■□□□□ 0.04
NPHP4-203ENST00000378169 NSFL1CQ9UNZ2 370 aaKnown RBP15.28■□□□□ 0.04
NPHP4-203ENST00000378169 TMEM94Q12767 1356 aa15.27■□□□□ 0.04
NPHP4-203ENST00000378169 XAGE2Q96GT9 111 aa15.27■□□□□ 0.04
NPHP4-203ENST00000378169 TAF5LO75529 589 aa15.27■□□□□ 0.04
NPHP4-203ENST00000378169 PKP1Q13835 747 aa15.27■□□□□ 0.04
NPHP4-203ENST00000378169 ANO6Q4KMQ2 910 aa15.27■□□□□ 0.04
NPHP4-203ENST00000378169 CPLX3Q8WVH0 158 aa15.27■□□□□ 0.04
NPHP4-203ENST00000378169 ESR2Q92731 530 aa15.27■□□□□ 0.04
NPHP4-203ENST00000378169 DNAJC25Q9H1X3 360 aa15.27■□□□□ 0.04
NPHP4-203ENST00000378169 SH3TC1Q8TE82 1336 aa15.27■□□□□ 0.03
NPHP4-203ENST00000378169 NLRP1Q9C000 1473 aa15.27■□□□□ 0.03
NPHP4-203ENST00000378169 BAG3O95817 575 aa15.26■□□□□ 0.03
NPHP4-203ENST00000378169 RTN1Q16799 776 aa15.26■□□□□ 0.03
NPHP4-203ENST00000378169 CRNKL1Q9BZJ0 848 aaKnown RBP15.26■□□□□ 0.03
NPHP4-203ENST00000378169 DEF6Q9H4E7 631 aa15.26■□□□□ 0.03
NPHP4-203ENST00000378169 BMP2KQ9NSY1 1161 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-203ENST00000378169 KBTBD3Q8NAB2 608 aa15.26■□□□□ 0.03
NPHP4-203ENST00000378169 MAP3K4Q9Y6R4 1608 aa15.26■□□□□ 0.03
NPHP4-203ENST00000378169 CCP110O43303 1012 aa15.26■□□□□ 0.03
NPHP4-203ENST00000378169 SYKP43405 635 aa15.26■□□□□ 0.03
NPHP4-203ENST00000378169 STX1AQ16623 288 aa15.26■□□□□ 0.03
NPHP4-203ENST00000378169 TTC12Q9H892 705 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-203ENST00000378169 KAT14Q9H8E8 782 aa15.26■□□□□ 0.03
NPHP4-203ENST00000378169 CROCC2H7BZ55 1655 aa15.26■□□□□ 0.03
NPHP4-203ENST00000378169 LDHCP07864 332 aa15.25■□□□□ 0.03
NPHP4-203ENST00000378169 HSPA4P34932 840 aa15.25■□□□□ 0.03
NPHP4-203ENST00000378169 ZNF76P36508 570 aa15.25■□□□□ 0.03
NPHP4-203ENST00000378169 EIF5P55010 431 aaKnown RBP15.25■□□□□ 0.03
NPHP4-203ENST00000378169 CCDC102BQ68D86 513 aa15.25■□□□□ 0.03
NPHP4-203ENST00000378169 TMOD2Q9NZR1 351 aa15.25■□□□□ 0.03
NPHP4-203ENST00000378169 MBD4O95243 580 aa15.25■□□□□ 0.03
NPHP4-203ENST00000378169 CD2BP2O95400 341 aaKnown RBP15.25■□□□□ 0.03
NPHP4-203ENST00000378169 TPTE2Q6XPS3 522 aa15.25■□□□□ 0.03
NPHP4-203ENST00000378169 SEC62Q99442 399 aaKnown RBP15.25■□□□□ 0.03
NPHP4-203ENST00000378169 KRT23Q9C075 422 aa15.25■□□□□ 0.03
NPHP4-203ENST00000378169 TOP1P11387 765 aaKnown RBP15.25■□□□□ 0.03
NPHP4-203ENST00000378169 RPS6KB1P23443 525 aa15.25■□□□□ 0.03
NPHP4-203ENST00000378169 PTH1RQ03431 593 aa15.25■□□□□ 0.03
NPHP4-203ENST00000378169 PTPN14Q15678 1187 aa15.25■□□□□ 0.03
NPHP4-203ENST00000378169 IFIT1BQ5T764 474 aaKnown RBP15.25■□□□□ 0.03
NPHP4-203ENST00000378169 ZNF622Q969S3 477 aaKnown RBP eCLIP15.25■□□□□ 0.03
NPHP4-203ENST00000378169 CT47A1Q5JQC4 288 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-203ENST00000378169 B4E1Z4 1266 aa15.24■□□□□ 0.03
NPHP4-203ENST00000378169 NOM1Q5C9Z4 860 aaKnown RBP15.24■□□□□ 0.03
NPHP4-203ENST00000378169 OTUD7BQ6GQQ9 843 aa15.24■□□□□ 0.03
NPHP4-203ENST00000378169 MRPS27Q92552 414 aaKnown RBP15.24■□□□□ 0.03
NPHP4-203ENST00000378169 ARHGAP31Q2M1Z3 1444 aa15.24■□□□□ 0.03
NPHP4-203ENST00000378169 A0A0D9SFI3 127 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms