RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 SIPA1L3O60292 1781 aaPredicted RBP18.86■□□□□ 0.61
ARHGEF1-204ENST00000378152 TAF5LO75529 589 aa18.86■□□□□ 0.61
ARHGEF1-204ENST00000378152 PDIA4P13667 645 aaKnown RBP18.86■□□□□ 0.61
ARHGEF1-204ENST00000378152 PLEKHO1Q53GL0 409 aaPredicted RBP18.86■□□□□ 0.61
ARHGEF1-204ENST00000378152 C1orf141Q5JVX7 400 aa18.86■□□□□ 0.61
ARHGEF1-204ENST00000378152 RBM43Q6ZSC3 357 aaKnown RBP18.86■□□□□ 0.61
ARHGEF1-204ENST00000378152 ANKRD24Q8TF21 1146 aa18.86■□□□□ 0.61
ARHGEF1-204ENST00000378152 HDAC5Q9UQL6 1122 aa18.86■□□□□ 0.61
ARHGEF1-204ENST00000378152 MED23Q9ULK4 1368 aa18.86■□□□□ 0.61
ARHGEF1-204ENST00000378152 ARID5BQ14865 1188 aa18.85■□□□□ 0.61
ARHGEF1-204ENST00000378152 Q6ZUG5 572 aa18.85■□□□□ 0.61
ARHGEF1-204ENST00000378152 DDX17Q92841 729 aaKnown RBP18.85■□□□□ 0.61
ARHGEF1-204ENST00000378152 LTBP4Q8N2S1 1624 aa18.85■□□□□ 0.61
ARHGEF1-204ENST00000378152 PPFIA3O75145 1194 aa18.85■□□□□ 0.61
ARHGEF1-204ENST00000378152 RESTQ13127 1097 aa18.85■□□□□ 0.61
ARHGEF1-204ENST00000378152 PKD1L3Q7Z443 1732 aa18.85■□□□□ 0.61
ARHGEF1-204ENST00000378152 ERBB3P21860 1342 aa18.85■□□□□ 0.61
ARHGEF1-204ENST00000378152 GTF3C6Q969F1 213 aa18.84■□□□□ 0.61
ARHGEF1-204ENST00000378152 SEC62Q99442 399 aaKnown RBP18.84■□□□□ 0.61
ARHGEF1-204ENST00000378152 FTOQ9C0B1 505 aaKnown RBP eCLIP18.84■□□□□ 0.61
ARHGEF1-204ENST00000378152 SNRKQ9NRH2 765 aa18.84■□□□□ 0.61
ARHGEF1-204ENST00000378152 CCDC9Q9Y3X0 531 aaKnown RBP18.84■□□□□ 0.61
ARHGEF1-204ENST00000378152 SMTNL1A8MU46 457 aa18.84■□□□□ 0.61
ARHGEF1-204ENST00000378152 NEK1Q96PY6 1258 aa18.84■□□□□ 0.61
ARHGEF1-204ENST00000378152 C11orf57Q6ZUT1 292 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF1-204ENST00000378152 RIC3Q7Z5B4 369 aa18.84■□□□□ 0.61
ARHGEF1-204ENST00000378152 AXIN2Q9Y2T1 843 aa18.84■□□□□ 0.61
ARHGEF1-204ENST00000378152 GOLGA6L19H0YKK7 550 aa18.83■□□□□ 0.61
ARHGEF1-204ENST00000378152 MYL6BP14649 208 aa18.83■□□□□ 0.61
ARHGEF1-204ENST00000378152 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.83■□□□□ 0.61
ARHGEF1-204ENST00000378152 FBXW7Q969H0 707 aa18.83■□□□□ 0.61
ARHGEF1-204ENST00000378152 HMG20BQ9P0W2 317 aa18.83■□□□□ 0.61
ARHGEF1-204ENST00000378152 COL15A1P39059 1388 aa18.83■□□□□ 0.6
ARHGEF1-204ENST00000378152 IGKV5-2P06315 115 aa18.83■□□□□ 0.6
ARHGEF1-204ENST00000378152 EPHA10Q5JZY3 1008 aa18.83■□□□□ 0.6
ARHGEF1-204ENST00000378152 LMOD2Q6P5Q4 547 aa18.83■□□□□ 0.6
ARHGEF1-204ENST00000378152 DNAJC2Q99543 621 aaKnown RBP18.83■□□□□ 0.6
ARHGEF1-204ENST00000378152 ALDH8A1Q9H2A2 487 aaPredicted RBP18.83■□□□□ 0.6
ARHGEF1-204ENST00000378152 AHDC1Q5TGY3 1603 aaPredicted RBP18.82■□□□□ 0.6
ARHGEF1-204ENST00000378152 CCDC112Q8NEF3 446 aa18.82■□□□□ 0.6
ARHGEF1-204ENST00000378152 USP27XA6NNY8 438 aa18.81■□□□□ 0.6
ARHGEF1-204ENST00000378152 DDX58O95786 925 aaKnown RBP18.81■□□□□ 0.6
ARHGEF1-204ENST00000378152 AMOTQ4VCS5 1084 aa18.81■□□□□ 0.6
ARHGEF1-204ENST00000378152 GTPBP4Q9BZE4 634 aaKnown RBP18.81■□□□□ 0.6
ARHGEF1-204ENST00000378152 COL22A1Q8NFW1 1626 aaPredicted RBP18.81■□□□□ 0.6
ARHGEF1-204ENST00000378152 SCRN1Q12765 414 aa18.81■□□□□ 0.6
ARHGEF1-204ENST00000378152 ERCC4Q92889 916 aaPredicted RBP18.81■□□□□ 0.6
ARHGEF1-204ENST00000378152 IQCB1Q15051 598 aa18.8■□□□□ 0.6
ARHGEF1-204ENST00000378152 TSGA10IPQ3SY00 556 aa18.8■□□□□ 0.6
ARHGEF1-204ENST00000378152 CCAR1Q8IX12 1150 aaKnown RBP18.8■□□□□ 0.6
ARHGEF1-204ENST00000378152 CYP21A2P08686 494 aa18.8■□□□□ 0.6
ARHGEF1-204ENST00000378152 KRT32Q14532 448 aa18.8■□□□□ 0.6
ARHGEF1-204ENST00000378152 CEP135Q66GS9 1140 aa18.8■□□□□ 0.6
ARHGEF1-204ENST00000378152 FILIP1Q7Z7B0 1213 aa18.8■□□□□ 0.6
ARHGEF1-204ENST00000378152 DBNLQ9UJU6 430 aaKnown RBP18.8■□□□□ 0.6
ARHGEF1-204ENST00000378152 CFAP45Q9UL16 551 aa18.8■□□□□ 0.6
ARHGEF1-204ENST00000378152 NAP1L2Q9ULW6 460 aaPredicted RBP18.8■□□□□ 0.6
ARHGEF1-204ENST00000378152 SLC39A6Q13433 755 aa18.79■□□□□ 0.6
ARHGEF1-204ENST00000378152 LRRC8AQ8IWT6 810 aa18.79■□□□□ 0.6
ARHGEF1-204ENST00000378152 GOLPH3LQ9H4A5 285 aa18.79■□□□□ 0.6
ARHGEF1-204ENST00000378152 USP16Q9Y5T5 823 aa18.79■□□□□ 0.6
ARHGEF1-204ENST00000378152 PARP4Q9UKK3 1724 aaKnown RBP18.79■□□□□ 0.6
ARHGEF1-204ENST00000378152 UTYO14607 1347 aa18.79■□□□□ 0.6
ARHGEF1-204ENST00000378152 TFCP2Q12800 502 aa18.79■□□□□ 0.6
ARHGEF1-204ENST00000378152 MYD88Q99836 296 aa18.79■□□□□ 0.6
ARHGEF1-204ENST00000378152 DDX21Q9NR30 783 aaKnown RBP eCLIP18.79■□□□□ 0.6
ARHGEF1-204ENST00000378152 SCN11AQ9UI33 1791 aa18.78■□□□□ 0.6
ARHGEF1-204ENST00000378152 USPL1Q5W0Q7 1092 aa18.78■□□□□ 0.6
ARHGEF1-204ENST00000378152 TRMT1Q9NXH9 659 aaKnown RBP18.78■□□□□ 0.6
ARHGEF1-204ENST00000378152 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.78■□□□□ 0.67e-6■■□□□ 11.8
ARHGEF1-204ENST00000378152 PAXBP1Q9Y5B6 917 aa18.78■□□□□ 0.6
ARHGEF1-204ENST00000378152 V9GYY5 206 aaPredicted RBP18.78■□□□□ 0.6
ARHGEF1-204ENST00000378152 BECN2A8MW95 431 aa18.78■□□□□ 0.6
ARHGEF1-204ENST00000378152 PIP4K2AP48426 406 aaPredicted RBP18.78■□□□□ 0.6
ARHGEF1-204ENST00000378152 GUCY1B3Q02153 619 aa18.78■□□□□ 0.6
ARHGEF1-204ENST00000378152 SLFNL1Q499Z3 407 aa18.78■□□□□ 0.6
ARHGEF1-204ENST00000378152 DDX46Q7L014 1031 aaKnown RBP18.78■□□□□ 0.6
ARHGEF1-204ENST00000378152 ZSCAN16Q9H4T2 348 aaPredicted RBP18.78■□□□□ 0.6
ARHGEF1-204ENST00000378152 CCT2P78371 535 aaKnown RBP18.78■□□□□ 0.6
ARHGEF1-204ENST00000378152 PDIA6Q15084 440 aa18.78■□□□□ 0.6
ARHGEF1-204ENST00000378152 ROBO1Q9Y6N7 1651 aa18.77■□□□□ 0.6
ARHGEF1-204ENST00000378152 JCADQ9P266 1359 aa18.77■□□□□ 0.6
ARHGEF1-204ENST00000378152 NEURL1BA8MQ27 555 aa18.77■□□□□ 0.59
ARHGEF1-204ENST00000378152 SKILP12757 684 aa18.77■□□□□ 0.59
ARHGEF1-204ENST00000378152 ADD1P35611 737 aaKnown RBP18.77■□□□□ 0.59
ARHGEF1-204ENST00000378152 NEXNQ0ZGT2 675 aa18.77■□□□□ 0.59
ARHGEF1-204ENST00000378152 CTNNA3Q9UI47 895 aa18.77■□□□□ 0.59
ARHGEF1-204ENST00000378152 ZNF609O15014 1411 aa18.77■□□□□ 0.59
ARHGEF1-204ENST00000378152 ZC3H6P61129 1189 aaKnown RBP18.76■□□□□ 0.59
ARHGEF1-204ENST00000378152 APOBRQ0VD83 1088 aa18.76■□□□□ 0.59
ARHGEF1-204ENST00000378152 STX1AQ16623 288 aa18.76■□□□□ 0.59
ARHGEF1-204ENST00000378152 STOX1Q6ZVD7 989 aa18.76■□□□□ 0.59
ARHGEF1-204ENST00000378152 FEZ1Q99689 392 aa18.76■□□□□ 0.59
ARHGEF1-204ENST00000378152 GCKRQ14397 625 aa18.76■□□□□ 0.59
ARHGEF1-204ENST00000378152 TNNI3KQ59H18 835 aa18.76■□□□□ 0.59
ARHGEF1-204ENST00000378152 XAGE3Q8WTP9 111 aa18.76■□□□□ 0.59
ARHGEF1-204ENST00000378152 USP28Q96RU2 1077 aa18.76■□□□□ 0.59
ARHGEF1-204ENST00000378152 DBNDD2Q9BQY9 259 aa18.76■□□□□ 0.59
ARHGEF1-204ENST00000378152 OGFRQ9NZT2 677 aa18.76■□□□□ 0.59
ARHGEF1-204ENST00000378152 U3KPZ7 1027 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms