RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
MDC1-201ENST00000376406 MAP9Q49MG5 647 aa12.63□□□□□ -0.39
MDC1-201ENST00000376406 TMEM2Q9UHN6 1383 aa12.63□□□□□ -0.39
MDC1-201ENST00000376406 GOLGA6L9A6NEM1 432 aa12.63□□□□□ -0.39
MDC1-201ENST00000376406 SLAIN2Q9P270 581 aa12.63□□□□□ -0.39
MDC1-201ENST00000376406 KLHL10Q6JEL2 608 aa12.63□□□□□ -0.39
MDC1-201ENST00000376406 UGGT1Q9NYU2 1555 aa12.63□□□□□ -0.39
MDC1-201ENST00000376406 USP48Q86UV5 1035 aa12.63□□□□□ -0.39
MDC1-201ENST00000376406 SEPT11Q9NVA2 429 aaKnown RBP12.63□□□□□ -0.39
MDC1-201ENST00000376406 TFIP11Q9UBB9 837 aaKnown RBP12.63□□□□□ -0.39
MDC1-201ENST00000376406 PDE6BP35913 854 aa12.63□□□□□ -0.39
MDC1-201ENST00000376406 AMPD3Q01432 767 aa12.63□□□□□ -0.39
MDC1-201ENST00000376406 KAT14Q9H8E8 782 aa12.63□□□□□ -0.39
MDC1-201ENST00000376406 RBM8AQ9Y5S9 174 aaKnown RBP12.63□□□□□ -0.39
MDC1-201ENST00000376406 BAG6P46379 1132 aa12.62□□□□□ -0.39
MDC1-201ENST00000376406 WDR78Q5VTH9 848 aa12.62□□□□□ -0.39
MDC1-201ENST00000376406 TAF3Q5VWG9 929 aa12.62□□□□□ -0.39
MDC1-201ENST00000376406 CNPY2Q9Y2B0 182 aa12.62□□□□□ -0.39
MDC1-201ENST00000376406 SCLT1Q96NL6 688 aa12.62□□□□□ -0.39
MDC1-201ENST00000376406 NUP88Q99567 741 aaPredicted RBP12.62□□□□□ -0.39
MDC1-201ENST00000376406 HSPA2P54652 639 aa12.62□□□□□ -0.39
MDC1-201ENST00000376406 PLEKHM2Q8IWE5 1019 aa12.62□□□□□ -0.39
MDC1-201ENST00000376406 CCDC102AQ96A19 550 aa12.62□□□□□ -0.39
MDC1-201ENST00000376406 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
MDC1-201ENST00000376406 PAXBP1Q9Y5B6 917 aa12.62□□□□□ -0.39
MDC1-201ENST00000376406 MAST3O60307 1309 aa12.62□□□□□ -0.39
MDC1-201ENST00000376406 CCDC194A0A1B0GVG4 234 aa12.62□□□□□ -0.39
MDC1-201ENST00000376406 ZNF165P49910 485 aa12.62□□□□□ -0.39
MDC1-201ENST00000376406 TMC6Q7Z403 805 aa12.62□□□□□ -0.39
MDC1-201ENST00000376406 KDM2BQ8NHM5 1336 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 YEATS4O95619 227 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 HOXB7P09629 217 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 TSPYL1Q9H0U9 437 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 F13A1P00488 732 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 CETN1Q12798 172 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 MLH3Q9UHC1 1453 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 ACSBG1Q96GR2 724 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 PRIMPOLQ96LW4 560 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 SPHKAPQ2M3C7 1700 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 TSPY2A6NKD2 308 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 POTEB2H3BUK9 544 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 FAM193AP78312 1265 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 ZNF772Q68DY9 489 aaPredicted RBP12.61□□□□□ -0.39
MDC1-201ENST00000376406 KCNG4Q8TDN1 519 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 XAGE3Q8WTP9 111 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 BMP15O95972 392 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 SH2D4AQ9H788 454 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 SAMD9LQ8IVG5 1584 aa12.61□□□□□ -0.39
MDC1-201ENST00000376406 TNNQ9UQP3 1299 aa12.6□□□□□ -0.39
MDC1-201ENST00000376406 FAM114A1Q8IWE2 563 aa12.6□□□□□ -0.39
MDC1-201ENST00000376406 CCDC171Q6TFL3 1326 aa12.6□□□□□ -0.39
MDC1-201ENST00000376406 DYNC1I1O14576 645 aa12.6□□□□□ -0.39
MDC1-201ENST00000376406 TSPYL6Q8N831 410 aa12.6□□□□□ -0.39
MDC1-201ENST00000376406 INTS4Q96HW7 963 aaKnown RBP12.6□□□□□ -0.39
MDC1-201ENST00000376406 C16orf45Q96MC5 204 aaPredicted RBP12.6□□□□□ -0.39
MDC1-201ENST00000376406 Q6ZUG5 572 aa12.6□□□□□ -0.39
MDC1-201ENST00000376406 ARAP3Q8WWN8 1544 aa12.6□□□□□ -0.39
MDC1-201ENST00000376406 ZRSR2Q15696 482 aaKnown RBP12.6□□□□□ -0.39
MDC1-201ENST00000376406 ATP2B3Q16720 1220 aa12.6□□□□□ -0.39
MDC1-201ENST00000376406 CCDC102BQ68D86 513 aa12.6□□□□□ -0.39
MDC1-201ENST00000376406 CACNA2D4Q7Z3S7 1137 aa12.6□□□□□ -0.39
MDC1-201ENST00000376406 CCDC144CPQ8IYA2 1237 aa12.6□□□□□ -0.39
MDC1-201ENST00000376406 URI1O94763 535 aaPredicted RBP12.6□□□□□ -0.39
MDC1-201ENST00000376406 SEPT7Q16181 437 aaKnown RBP12.6□□□□□ -0.39
MDC1-201ENST00000376406 SLC26A6Q9BXS9 759 aa12.6□□□□□ -0.39
MDC1-201ENST00000376406 USP21Q9UK80 565 aa12.6□□□□□ -0.39
MDC1-201ENST00000376406 HAND2P61296 217 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 NMIQ13287 307 aaPredicted RBP12.59□□□□□ -0.39
MDC1-201ENST00000376406 GIMAP6Q6P9H5 292 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 NECAB1Q8N987 351 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 USO1O60763 962 aaKnown RBP12.59□□□□□ -0.39
MDC1-201ENST00000376406 VPS36Q86VN1 386 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 MICU3Q86XE3 530 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 CCDC82Q8N4S0 544 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 CALML4Q96GE6 196 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 ZBTB7BO15156 539 aaPredicted RBP12.59□□□□□ -0.39
MDC1-201ENST00000376406 SNW1Q13573 536 aaKnown RBP12.59□□□□□ -0.39
MDC1-201ENST00000376406 LINS1Q8NG48 757 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 USP26Q9BXU7 913 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 TCP11L1Q9NUJ3 509 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 ADCY10Q96PN6 1610 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 ESR2Q92731 530 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 CRACR2AQ9BSW2 395 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 RAD50Q92878 1312 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 ANXA1P04083 346 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 KIF4BQ2VIQ3 1234 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 CEP135Q66GS9 1140 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 COPS6Q7L5N1 327 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 CENPHQ9H3R5 247 aa12.59□□□□□ -0.39
MDC1-201ENST00000376406 ANO6Q4KMQ2 910 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 RUFY3Q7L099 469 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 PHACTR3Q96KR7 559 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 PAG1Q9NWQ8 432 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 CCDC87Q9NVE4 849 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 RMND1Q9NWS8 449 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 KLF18A0A0U1RQI7 1052 aa12.58□□□□□ -0.4
MDC1-201ENST00000376406 RBM25P49756 843 aaKnown RBP12.58□□□□□ -0.4
MDC1-201ENST00000376406 CNBD1Q8NA66 436 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms