RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 KAT6BQ8WYB5 2073 aa13.5□□□□□ -0.25
TM9SF2-201ENST00000376387 NLRP6P59044 892 aa13.49□□□□□ -0.25
TM9SF2-201ENST00000376387 KRT222Q8N1A0 295 aa13.49□□□□□ -0.25
TM9SF2-201ENST00000376387 C9orf78Q9NZ63 289 aaPredicted RBP13.49□□□□□ -0.25
TM9SF2-201ENST00000376387 MAP3K2Q9Y2U5 619 aa13.49□□□□□ -0.25
TM9SF2-201ENST00000376387 NGDNQ8NEJ9 315 aaKnown RBP13.49□□□□□ -0.25
TM9SF2-201ENST00000376387 GPATCH3Q96I76 525 aa13.49□□□□□ -0.25
TM9SF2-201ENST00000376387 DNAJC5Q9H3Z4 198 aa13.49□□□□□ -0.25
TM9SF2-201ENST00000376387 PRAMEF22A3QJZ6 481 aa13.49□□□□□ -0.25
TM9SF2-201ENST00000376387 ADD1P35611 737 aaKnown RBP13.49□□□□□ -0.25
TM9SF2-201ENST00000376387 CCAR2Q8N163 923 aaKnown RBP13.49□□□□□ -0.25
TM9SF2-201ENST00000376387 KAZALD1Q96I82 304 aa13.49□□□□□ -0.25
TM9SF2-201ENST00000376387 FAM53CQ9NYF3 392 aa13.49□□□□□ -0.25
TM9SF2-201ENST00000376387 ADGRL3Q9HAR2 1447 aa13.49□□□□□ -0.25
TM9SF2-201ENST00000376387 SEMA3FQ13275 785 aa13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 MTX1Q13505 466 aa13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 SARM1Q6SZW1 724 aa13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 CCAR1Q8IX12 1150 aaKnown RBP13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 FAM177A1Q8N128 213 aaPredicted RBP13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 GTF3C6Q969F1 213 aa13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 MRFAP1L1Q96HT8 127 aa13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 CCDC129Q6ZRS4 1044 aa13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 SLC26A8Q96RN1 970 aa13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 PIK3C2AO00443 1686 aa13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 H3BQV1 296 aa13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 SNW1Q13573 536 aaKnown RBP13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 ANKRD1Q15327 319 aa13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 IFFO2Q5TF58 517 aa13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 Q6ZUG5 572 aa13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 SUCLG2Q96I99 432 aa13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
TM9SF2-201ENST00000376387 FER1L4A9Z1Z3 1794 aa13.47□□□□□ -0.25
TM9SF2-201ENST00000376387 UBR1Q8IWV7 1749 aa13.47□□□□□ -0.25
TM9SF2-201ENST00000376387 MED23Q9ULK4 1368 aa13.47□□□□□ -0.25
TM9SF2-201ENST00000376387 ADAMTS13Q76LX8 1427 aa13.47□□□□□ -0.25
TM9SF2-201ENST00000376387 NBPF11Q86T75 865 aa13.47□□□□□ -0.25
TM9SF2-201ENST00000376387 SETD1BQ9UPS6 1966 aaKnown RBP13.47□□□□□ -0.25
TM9SF2-201ENST00000376387 TAF5LO75529 589 aa13.46□□□□□ -0.25
TM9SF2-201ENST00000376387 SCRN1Q12765 414 aa13.46□□□□□ -0.25
TM9SF2-201ENST00000376387 STX1AQ16623 288 aa13.46□□□□□ -0.25
TM9SF2-201ENST00000376387 ERCC6LQ2NKX8 1250 aa13.46□□□□□ -0.25
TM9SF2-201ENST00000376387 AOPEPQ8N6M6 819 aa13.46□□□□□ -0.25
TM9SF2-201ENST00000376387 SEC62Q99442 399 aaKnown RBP13.46□□□□□ -0.25
TM9SF2-201ENST00000376387 BICC1Q9H694 974 aaKnown RBP13.46□□□□□ -0.25
TM9SF2-201ENST00000376387 SNRKQ9NRH2 765 aa13.46□□□□□ -0.25
TM9SF2-201ENST00000376387 BECN2A8MW95 431 aa13.46□□□□□ -0.25
TM9SF2-201ENST00000376387 IRF6O14896 467 aa13.46□□□□□ -0.25
TM9SF2-201ENST00000376387 RNF20Q5VTR2 975 aa13.46□□□□□ -0.25
TM9SF2-201ENST00000376387 ERO1AQ96HE7 468 aa13.46□□□□□ -0.25
TM9SF2-201ENST00000376387 DNAJC2Q99543 621 aaKnown RBP13.46□□□□□ -0.26
TM9SF2-201ENST00000376387 GUCY1B3Q02153 619 aa13.45□□□□□ -0.26
TM9SF2-201ENST00000376387 USP28Q96RU2 1077 aa13.45□□□□□ -0.26
TM9SF2-201ENST00000376387 ALDH8A1Q9H2A2 487 aaPredicted RBP13.45□□□□□ -0.26
TM9SF2-201ENST00000376387 BABAM1Q9NWV8 329 aa13.45□□□□□ -0.26
TM9SF2-201ENST00000376387 GIGYF1O75420 1035 aaPredicted RBP13.45□□□□□ -0.26
TM9SF2-201ENST00000376387 SLU7O95391 586 aaKnown RBP13.45□□□□□ -0.26
TM9SF2-201ENST00000376387 LTKP29376 864 aa13.45□□□□□ -0.26
TM9SF2-201ENST00000376387 E4F1Q66K89 784 aaPredicted RBP13.45□□□□□ -0.26
TM9SF2-201ENST00000376387 SH3BP1Q9Y3L3 701 aa13.45□□□□□ -0.26
TM9SF2-201ENST00000376387 PTPRUQ92729 1446 aa13.45□□□□□ -0.26
TM9SF2-201ENST00000376387 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
TM9SF2-201ENST00000376387 SLFNL1Q499Z3 407 aa13.44□□□□□ -0.26
TM9SF2-201ENST00000376387 MPRIPQ6WCQ1 1025 aa13.44□□□□□ -0.26
TM9SF2-201ENST00000376387 ERC1Q8IUD2 1116 aa13.44□□□□□ -0.26
TM9SF2-201ENST00000376387 NEK1Q96PY6 1258 aa13.44□□□□□ -0.26
TM9SF2-201ENST00000376387 CTDNEP1O95476 244 aa13.44□□□□□ -0.26
TM9SF2-201ENST00000376387 IRX5P78411 483 aaPredicted RBP13.44□□□□□ -0.26
TM9SF2-201ENST00000376387 G3BP1Q13283 466 aaKnown RBP eCLIP13.44□□□□□ -0.26
TM9SF2-201ENST00000376387 SYT10Q6XYQ8 523 aa13.44□□□□□ -0.26
TM9SF2-201ENST00000376387 CFAP45Q9UL16 551 aa13.44□□□□□ -0.26
TM9SF2-201ENST00000376387 BTBD11A6QL63 1104 aa13.44□□□□□ -0.26
TM9SF2-201ENST00000376387 HIP1O00291 1037 aa13.44□□□□□ -0.26
TM9SF2-201ENST00000376387 TAF3Q5VWG9 929 aa13.44□□□□□ -0.26
TM9SF2-201ENST00000376387 ENGASEQ8NFI3 743 aa13.44□□□□□ -0.26
TM9SF2-201ENST00000376387 A0A0G2JLW4 131 aa13.43□□□□□ -0.26
TM9SF2-201ENST00000376387 NEMFO60524 1076 aa13.43□□□□□ -0.26
TM9SF2-201ENST00000376387 CYP21A2P08686 494 aa13.43□□□□□ -0.26
TM9SF2-201ENST00000376387 AIMP1Q12904 312 aaKnown RBP13.43□□□□□ -0.26
TM9SF2-201ENST00000376387 ARMCX5Q6P1M9 558 aa13.43□□□□□ -0.26
TM9SF2-201ENST00000376387 STOX1Q6ZVD7 989 aa13.43□□□□□ -0.26
TM9SF2-201ENST00000376387 MYH15Q9Y2K3 1946 aa13.43□□□□□ -0.26
TM9SF2-201ENST00000376387 CCT2P78371 535 aaKnown RBP13.43□□□□□ -0.26
TM9SF2-201ENST00000376387 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
TM9SF2-201ENST00000376387 PPP1R13BQ96KQ4 1090 aa13.43□□□□□ -0.26
TM9SF2-201ENST00000376387 NCOA5Q9HCD5 579 aaKnown RBP13.43□□□□□ -0.26
TM9SF2-201ENST00000376387 RCOR1Q9UKL0 485 aa13.43□□□□□ -0.26
TM9SF2-201ENST00000376387 JCADQ9P266 1359 aa13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 TSGA10IPQ3SY00 556 aa13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 NBPF6Q5VWK0 638 aa13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 FSIP1Q8NA03 581 aa13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 NBPF4Q96M43 638 aa13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 TRERF1Q96PN7 1200 aa13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 TMEM2Q9UHN6 1383 aa13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 CAVIN2O95810 425 aa13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 GORABQ5T7V8 394 aa13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 ZSCAN16Q9H4T2 348 aaPredicted RBP13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 FHOD1Q9Y613 1164 aa13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 KDM3BQ7LBC6 1761 aa13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 CLCN6P51797 869 aa13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 APOBRQ0VD83 1088 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms