RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 NBPF7P0C2Y1 421 aaPredicted RBP15.71■□□□□ 0.1
C9orf47-203ENST00000375851 PLBD2Q8NHP8 589 aa15.71■□□□□ 0.1
C9orf47-203ENST00000375851 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.71■□□□□ 0.1
C9orf47-203ENST00000375851 RAB3GAP1Q15042 981 aa15.7■□□□□ 0.1
C9orf47-203ENST00000375851 KCNG4Q8TDN1 519 aa15.7■□□□□ 0.1
C9orf47-203ENST00000375851 DACT1Q9NYF0 836 aa15.7■□□□□ 0.1
C9orf47-203ENST00000375851 NEO1Q92859 1461 aa15.7■□□□□ 0.1
C9orf47-203ENST00000375851 CACNA2D4Q7Z3S7 1137 aa15.7■□□□□ 0.1
C9orf47-203ENST00000375851 TRMT1Q9NXH9 659 aaKnown RBP15.7■□□□□ 0.1
C9orf47-203ENST00000375851 RAD50Q92878 1312 aa15.7■□□□□ 0.1
C9orf47-203ENST00000375851 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.7■□□□□ 0.1
C9orf47-203ENST00000375851 SBNO2Q9Y2G9 1366 aa15.7■□□□□ 0.1
C9orf47-203ENST00000375851 SPA17Q15506 151 aa15.7■□□□□ 0.1
C9orf47-203ENST00000375851 KANK3Q6NY19 840 aa15.7■□□□□ 0.1
C9orf47-203ENST00000375851 INTS4Q96HW7 963 aaKnown RBP15.7■□□□□ 0.1
C9orf47-203ENST00000375851 TARBP1Q13395 1621 aaKnown RBP15.7■□□□□ 0.1
C9orf47-203ENST00000375851 CCDC171Q6TFL3 1326 aa15.7■□□□□ 0.1
C9orf47-203ENST00000375851 DHX32Q7L7V1 743 aaKnown RBP15.7■□□□□ 0.1
C9orf47-203ENST00000375851 TMC6Q7Z403 805 aa15.7■□□□□ 0.1
C9orf47-203ENST00000375851 KLHDC4Q8TBB5 520 aa15.7■□□□□ 0.1
C9orf47-203ENST00000375851 DCAF8L1A6NGE4 600 aa15.69■□□□□ 0.1
C9orf47-203ENST00000375851 NEMFO60524 1076 aa15.69■□□□□ 0.1
C9orf47-203ENST00000375851 URI1O94763 535 aaPredicted RBP15.69■□□□□ 0.1
C9orf47-203ENST00000375851 CALML4Q96GE6 196 aa15.69■□□□□ 0.1
C9orf47-203ENST00000375851 ARHGEF5Q12774 1597 aa15.69■□□□□ 0.1
C9orf47-203ENST00000375851 EYA2O00167 538 aa15.69■□□□□ 0.1
C9orf47-203ENST00000375851 FGFR1OPO95684 399 aaKnown RBP15.69■□□□□ 0.1
C9orf47-203ENST00000375851 GSDMDP57764 484 aa15.69■□□□□ 0.1
C9orf47-203ENST00000375851 CABP5Q9NP86 173 aa15.69■□□□□ 0.1
C9orf47-203ENST00000375851 PNMA6EA0A0J9YXQ4 647 aa15.69■□□□□ 0.1
C9orf47-203ENST00000375851 IQCEQ6IPM2 695 aa15.69■□□□□ 0.1
C9orf47-203ENST00000375851 TSPY3P0CV98 308 aa15.69■□□□□ 0.1
C9orf47-203ENST00000375851 TSPY8P0CW00 308 aa15.69■□□□□ 0.1
C9orf47-203ENST00000375851 MRPS27Q92552 414 aaKnown RBP15.69■□□□□ 0.1
C9orf47-203ENST00000375851 TAF4BQ92750 862 aa15.69■□□□□ 0.1
C9orf47-203ENST00000375851 KIF20AO95235 890 aa15.68■□□□□ 0.1
C9orf47-203ENST00000375851 APOBRQ0VD83 1088 aa15.68■□□□□ 0.1
C9orf47-203ENST00000375851 C16orf45Q96MC5 204 aaPredicted RBP15.68■□□□□ 0.1
C9orf47-203ENST00000375851 FEZ1Q99689 392 aa15.68■□□□□ 0.1
C9orf47-203ENST00000375851 TNNT1P13805 278 aa15.68■□□□□ 0.1
C9orf47-203ENST00000375851 CPA1P15085 419 aa15.68■□□□□ 0.1
C9orf47-203ENST00000375851 RUFY3Q7L099 469 aa15.68■□□□□ 0.1
C9orf47-203ENST00000375851 SLC52A2Q9HAB3 445 aa15.68■□□□□ 0.1
C9orf47-203ENST00000375851 KIF5CO60282 957 aa15.68■□□□□ 0.1
C9orf47-203ENST00000375851 MATR3P43243 847 aaKnown RBP eCLIP15.68■□□□□ 0.1
C9orf47-203ENST00000375851 AMPD3Q01432 767 aa15.68■□□□□ 0.1
C9orf47-203ENST00000375851 KIF4BQ2VIQ3 1234 aa15.68■□□□□ 0.1
C9orf47-203ENST00000375851 MIGA1Q8NAN2 632 aa15.68■□□□□ 0.1
C9orf47-203ENST00000375851 NUP88Q99567 741 aaPredicted RBP15.68■□□□□ 0.1
C9orf47-203ENST00000375851 PYM1Q9BRP8 204 aaKnown RBP15.68■□□□□ 0.1
C9orf47-203ENST00000375851 NYXQ9GZU5 481 aa15.68■□□□□ 0.1
C9orf47-203ENST00000375851 RTCBQ9Y3I0 505 aaKnown RBP15.68■□□□□ 0.1
C9orf47-203ENST00000375851 EIF3JO75822 258 aaKnown RBP15.68■□□□□ 0.1
C9orf47-203ENST00000375851 DBNDD2Q9BQY9 259 aa15.68■□□□□ 0.1
C9orf47-203ENST00000375851 GCC2Q8IWJ2 1684 aa15.68■□□□□ 0.1
C9orf47-203ENST00000375851 MAGEB6P1A0A0J9YX57 407 aa15.67■□□□□ 0.1
C9orf47-203ENST00000375851 A0A1B0GUL7 405 aa15.67■□□□□ 0.1
C9orf47-203ENST00000375851 A1BGP04217 495 aa15.67■□□□□ 0.1
C9orf47-203ENST00000375851 XRCC6P12956 609 aaKnown RBP eCLIP15.67■□□□□ 0.1
C9orf47-203ENST00000375851 ZNF496Q96IT1 587 aaPredicted RBP15.67■□□□□ 0.1
C9orf47-203ENST00000375851 GOLGA6L10A6NI86 522 aa15.67■□□□□ 0.1
C9orf47-203ENST00000375851 MARCKSP29966 332 aaPredicted RBP15.67■□□□□ 0.1
C9orf47-203ENST00000375851 MTIF2P46199 727 aaKnown RBP15.67■□□□□ 0.1
C9orf47-203ENST00000375851 MAGEB6Q8N7X4 407 aa15.67■□□□□ 0.1
C9orf47-203ENST00000375851 CWC15Q9P013 229 aaKnown RBP15.67■□□□□ 0.1
C9orf47-203ENST00000375851 NSFL1CQ9UNZ2 370 aaKnown RBP15.67■□□□□ 0.1
C9orf47-203ENST00000375851 GNAT2P19087 354 aa15.67■□□□□ 0.1
C9orf47-203ENST00000375851 CCDC191Q8NCU4 936 aa15.67■□□□□ 0.1
C9orf47-203ENST00000375851 CCDC148Q8NFR7 591 aa15.67■□□□□ 0.1
C9orf47-203ENST00000375851 YEATS2Q9ULM3 1422 aa15.67■□□□□ 0.1
C9orf47-203ENST00000375851 PRKCSHP14314 528 aaPredicted RBP15.66■□□□□ 0.1
C9orf47-203ENST00000375851 GNAQP50148 359 aa15.66■□□□□ 0.1
C9orf47-203ENST00000375851 PDCL2Q8N4E4 241 aa15.66■□□□□ 0.1
C9orf47-203ENST00000375851 F8W031 263 aaPredicted RBP15.66■□□□□ 0.1
C9orf47-203ENST00000375851 BMP15O95972 392 aa15.66■□□□□ 0.1
C9orf47-203ENST00000375851 EIF4A1P60842 406 aaKnown RBP15.66■□□□□ 0.1
C9orf47-203ENST00000375851 FAM200AQ8TCP9 573 aa15.66■□□□□ 0.1
C9orf47-203ENST00000375851 TNNI3KQ59H18 835 aa15.66■□□□□ 0.1
C9orf47-203ENST00000375851 FPGT-TNNI3KV9GXZ4 949 aa15.66■□□□□ 0.1
C9orf47-203ENST00000375851 ENOX2Q16206 610 aaKnown RBP15.66■□□□□ 0.1
C9orf47-203ENST00000375851 CCDC178Q5BJE1 867 aa15.66■□□□□ 0.1
C9orf47-203ENST00000375851 YEATS4O95619 227 aa15.65■□□□□ 0.1
C9orf47-203ENST00000375851 ANO6Q4KMQ2 910 aa15.65■□□□□ 0.1
C9orf47-203ENST00000375851 LEKR1Q6ZMV7 388 aa15.65■□□□□ 0.1
C9orf47-203ENST00000375851 PTPDC1A2A3K4 754 aa15.65■□□□□ 0.1
C9orf47-203ENST00000375851 SYT1P21579 422 aa15.65■□□□□ 0.1
C9orf47-203ENST00000375851 SUCLG2Q96I99 432 aa15.65■□□□□ 0.1
C9orf47-203ENST00000375851 SH3TC1Q8TE82 1336 aa15.65■□□□□ 0.1
C9orf47-203ENST00000375851 KIAA0232Q92628 1395 aa15.65■□□□□ 0.1
C9orf47-203ENST00000375851 H0YHG0 523 aa15.65■□□□□ 0.1
C9orf47-203ENST00000375851 DDX17Q92841 729 aaKnown RBP15.65■□□□□ 0.1
C9orf47-203ENST00000375851 MAGI2Q86UL8 1455 aa15.64■□□□□ 0.09
C9orf47-203ENST00000375851 SPTLC2O15270 562 aa15.64■□□□□ 0.09
C9orf47-203ENST00000375851 GCKRQ14397 625 aa15.64■□□□□ 0.09
C9orf47-203ENST00000375851 TDRD12Q587J7 1177 aaKnown RBP15.64■□□□□ 0.09
C9orf47-203ENST00000375851 IL17REQ8NFR9 667 aa15.64■□□□□ 0.09
C9orf47-203ENST00000375851 CCDC66A2RUB6 948 aa15.64■□□□□ 0.09
C9orf47-203ENST00000375851 AFMP43652 599 aa15.64■□□□□ 0.09
C9orf47-203ENST00000375851 PRIM1P49642 420 aaKnown RBP15.64■□□□□ 0.09
C9orf47-203ENST00000375851 ZNF804AQ7Z570 1209 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms