RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 GTF2F1P35269 517 aaKnown RBP eCLIP17.99■□□□□ 0.477e-15■■■■□ 25.6
MSH5-203ENST00000375750 MAP3K11Q16584 847 aa17.99■□□□□ 0.47
MSH5-203ENST00000375750 CCDC186Q7Z3E2 898 aa17.99■□□□□ 0.47
MSH5-203ENST00000375750 EVI5LQ96CN4 794 aa17.99■□□□□ 0.47
MSH5-203ENST00000375750 CBX8Q9HC52 389 aa17.99■□□□□ 0.47
MSH5-203ENST00000375750 NBPF26B4DH59 902 aa17.99■□□□□ 0.47
MSH5-203ENST00000375750 PPFIA3O75145 1194 aa17.99■□□□□ 0.47
MSH5-203ENST00000375750 A1BGP04217 495 aa17.99■□□□□ 0.47
MSH5-203ENST00000375750 KRT85P78386 507 aa17.99■□□□□ 0.47
MSH5-203ENST00000375750 NBPF14Q5TI25 921 aa17.99■□□□□ 0.47
MSH5-203ENST00000375750 NBPF10Q6P3W6 841 aaKnown RBP17.99■□□□□ 0.47
MSH5-203ENST00000375750 NBPF15Q8N660 670 aa17.99■□□□□ 0.47
MSH5-203ENST00000375750 PIGBQ92521 554 aa17.99■□□□□ 0.47
MSH5-203ENST00000375750 MAP4K1Q92918 833 aa17.99■□□□□ 0.47
MSH5-203ENST00000375750 MYD88Q99836 296 aa17.99■□□□□ 0.47
MSH5-203ENST00000375750 BICC1Q9H694 974 aaKnown RBP17.99■□□□□ 0.47
MSH5-203ENST00000375750 A0A087WWV3 80 aa17.98■□□□□ 0.47
MSH5-203ENST00000375750 UBAP1LF5GYI3 381 aa17.98■□□□□ 0.47
MSH5-203ENST00000375750 TOB2Q14106 344 aaPredicted RBP17.98■□□□□ 0.47
MSH5-203ENST00000375750 KCNB2Q92953 911 aa17.98■□□□□ 0.47
MSH5-203ENST00000375750 TM6SF1Q9BZW5 370 aa17.98■□□□□ 0.47
MSH5-203ENST00000375750 ASAP1Q9ULH1 1129 aa17.98■□□□□ 0.47
MSH5-203ENST00000375750 EXOC5O00471 708 aa17.98■□□□□ 0.47
MSH5-203ENST00000375750 DRC7Q8IY82 874 aa17.98■□□□□ 0.47
MSH5-203ENST00000375750 FSD1Q9BTV5 496 aa17.98■□□□□ 0.47
MSH5-203ENST00000375750 NR1I2O75469 434 aa17.97■□□□□ 0.47
MSH5-203ENST00000375750 CEBPZQ03701 1054 aaKnown RBP17.97■□□□□ 0.47
MSH5-203ENST00000375750 SMAP1Q8IYB5 467 aaPredicted RBP17.97■□□□□ 0.47
MSH5-203ENST00000375750 FAM200AQ8TCP9 573 aa17.97■□□□□ 0.47
MSH5-203ENST00000375750 TNMDQ9H2S6 317 aa17.97■□□□□ 0.47
MSH5-203ENST00000375750 GRM8O00222 908 aa17.97■□□□□ 0.47
MSH5-203ENST00000375750 NAA30Q147X3 362 aaPredicted RBP17.97■□□□□ 0.47
MSH5-203ENST00000375750 CCDC9Q9Y3X0 531 aaKnown RBP17.97■□□□□ 0.47
MSH5-203ENST00000375750 DISP2A7MBM2 1401 aa17.97■□□□□ 0.47
MSH5-203ENST00000375750 BLOC1S2Q6QNY1 142 aa17.96■□□□□ 0.47
MSH5-203ENST00000375750 SPATA32Q96LK8 384 aa17.96■□□□□ 0.47
MSH5-203ENST00000375750 METTL22Q9BUU2 404 aaPredicted RBP17.96■□□□□ 0.47
MSH5-203ENST00000375750 LRRC2Q9BYS8 371 aa17.96■□□□□ 0.47
MSH5-203ENST00000375750 GLI3P10071 1580 aa17.96■□□□□ 0.47
MSH5-203ENST00000375750 NEXNQ0ZGT2 675 aa17.96■□□□□ 0.47
MSH5-203ENST00000375750 GPATCH3Q96I76 525 aa17.96■□□□□ 0.47
MSH5-203ENST00000375750 PGBD1Q96JS3 809 aa17.96■□□□□ 0.47
MSH5-203ENST00000375750 C16orf45Q96MC5 204 aaPredicted RBP17.96■□□□□ 0.47
MSH5-203ENST00000375750 NEURL1BA8MQ27 555 aa17.96■□□□□ 0.46
MSH5-203ENST00000375750 IGSF3O75054 1194 aa17.96■□□□□ 0.46
MSH5-203ENST00000375750 U2AF2P26368 475 aaKnown RBP eCLIP17.96■□□□□ 0.468e-8■■■■□ 26.3
MSH5-203ENST00000375750 MTX1Q13505 466 aa17.96■□□□□ 0.46
MSH5-203ENST00000375750 DNAJC25Q9H1X3 360 aa17.96■□□□□ 0.46
MSH5-203ENST00000375750 GOLGA6L4A6NEF3 574 aa17.95■□□□□ 0.46
MSH5-203ENST00000375750 CCDC129Q6ZRS4 1044 aa17.95■□□□□ 0.46
MSH5-203ENST00000375750 LEO1Q8WVC0 666 aaPredicted RBP17.95■□□□□ 0.46
MSH5-203ENST00000375750 SYTL4Q96C24 671 aaPredicted RBP17.95■□□□□ 0.46
MSH5-203ENST00000375750 KCPQ6ZWJ8 1503 aa17.95■□□□□ 0.46
MSH5-203ENST00000375750 ATP5J2-PTCD1G3V325 749 aa17.95■□□□□ 0.46
MSH5-203ENST00000375750 ZSCAN20P17040 1043 aaPredicted RBP17.95■□□□□ 0.46
MSH5-203ENST00000375750 G3BP1Q13283 466 aaKnown RBP eCLIP17.95■□□□□ 0.46
MSH5-203ENST00000375750 TRIM5Q9C035 493 aa17.95■□□□□ 0.46
MSH5-203ENST00000375750 TOGARAM1Q9Y4F4 1720 aa17.94■□□□□ 0.46
MSH5-203ENST00000375750 RPS6KB1P23443 525 aa17.94■□□□□ 0.46
MSH5-203ENST00000375750 TTLL7Q6ZT98 887 aa17.94■□□□□ 0.46
MSH5-203ENST00000375750 GCKRQ14397 625 aa17.94■□□□□ 0.46
MSH5-203ENST00000375750 ARID5BQ14865 1188 aa17.94■□□□□ 0.46
MSH5-203ENST00000375750 SEC62Q99442 399 aaKnown RBP17.94■□□□□ 0.46
MSH5-203ENST00000375750 FTOQ9C0B1 505 aaKnown RBP eCLIP17.94■□□□□ 0.46
MSH5-203ENST00000375750 ATG3Q9NT62 314 aa17.94■□□□□ 0.46
MSH5-203ENST00000375750 SLFNL1Q499Z3 407 aa17.93■□□□□ 0.46
MSH5-203ENST00000375750 EPHA10Q5JZY3 1008 aa17.93■□□□□ 0.46
MSH5-203ENST00000375750 PDCL2Q8N4E4 241 aa17.93■□□□□ 0.46
MSH5-203ENST00000375750 BICD2Q8TD16 824 aa17.93■□□□□ 0.46
MSH5-203ENST00000375750 SPATA31A1Q5TZJ5 1347 aa17.93■□□□□ 0.46
MSH5-203ENST00000375750 KAT6BQ8WYB5 2073 aa17.92■□□□□ 0.46
MSH5-203ENST00000375750 COL15A1P39059 1388 aa17.92■□□□□ 0.46
MSH5-203ENST00000375750 CCDC144BQ3MJ40 725 aa17.92■□□□□ 0.46
MSH5-203ENST00000375750 CCDC144CPQ8IYA2 1237 aa17.92■□□□□ 0.46
MSH5-203ENST00000375750 UTYO14607 1347 aa17.92■□□□□ 0.46
MSH5-203ENST00000375750 TNS2Q63HR2 1409 aa17.92■□□□□ 0.46
MSH5-203ENST00000375750 GOLGA6L6A8MZA4 724 aa17.91■□□□□ 0.46
MSH5-203ENST00000375750 PLBD2Q8NHP8 589 aa17.91■□□□□ 0.46
MSH5-203ENST00000375750 FBXW7Q969H0 707 aa17.91■□□□□ 0.46
MSH5-203ENST00000375750 ZNF330Q9Y3S2 320 aaPredicted RBP17.91■□□□□ 0.46
MSH5-203ENST00000375750 PSMA5P28066 241 aa17.91■□□□□ 0.46
MSH5-203ENST00000375750 ZNF75DP51815 510 aa17.91■□□□□ 0.46
MSH5-203ENST00000375750 CHAF1AQ13111 956 aaPredicted RBP17.91■□□□□ 0.46
MSH5-203ENST00000375750 DNAJC10Q8IXB1 793 aa17.91■□□□□ 0.46
MSH5-203ENST00000375750 ERCC4Q92889 916 aaPredicted RBP17.91■□□□□ 0.46
MSH5-203ENST00000375750 BRF1Q92994 677 aa17.91■□□□□ 0.46
MSH5-203ENST00000375750 UBR2Q8IWV8 1755 aa17.91■□□□□ 0.46
MSH5-203ENST00000375750 ERC1Q8IUD2 1116 aa17.91■□□□□ 0.46
MSH5-203ENST00000375750 A0A0G2JS52 829 aa17.9■□□□□ 0.46
MSH5-203ENST00000375750 ZSCAN25Q6NSZ9 544 aa17.9■□□□□ 0.46
MSH5-203ENST00000375750 CACTINQ8WUQ7 758 aaKnown RBP17.9■□□□□ 0.46
MSH5-203ENST00000375750 CLSTN2Q9H4D0 955 aa17.9■□□□□ 0.46
MSH5-203ENST00000375750 PLCH1Q4KWH8 1693 aa17.9■□□□□ 0.46
MSH5-203ENST00000375750 ZNF165P49910 485 aa17.9■□□□□ 0.46
MSH5-203ENST00000375750 DDB1Q16531 1140 aa17.9■□□□□ 0.46
MSH5-203ENST00000375750 ZBTB3Q9H5J0 574 aa17.9■□□□□ 0.46
MSH5-203ENST00000375750 ELP1O95163 1332 aa17.89■□□□□ 0.45
MSH5-203ENST00000375750 PAPPAQ13219 1627 aa17.89■□□□□ 0.45
MSH5-203ENST00000375750 TAF5LO75529 589 aa17.89■□□□□ 0.45
MSH5-203ENST00000375750 HSP90B1P14625 803 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms