RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 IQCEQ6IPM2 695 aa19.38■□□□□ 0.69
VARS-215ENST00000375663 PATL2C9JE40 543 aaKnown RBP19.38■□□□□ 0.69
VARS-215ENST00000375663 TFCP2Q12800 502 aa19.38■□□□□ 0.69
VARS-215ENST00000375663 SSH2Q76I76 1423 aa19.38■□□□□ 0.69
VARS-215ENST00000375663 NUP88Q99567 741 aaPredicted RBP19.37■□□□□ 0.69
VARS-215ENST00000375663 TM6SF1Q9BZW5 370 aa19.37■□□□□ 0.69
VARS-215ENST00000375663 OSBPL3Q9H4L5 887 aa19.37■□□□□ 0.69
VARS-215ENST00000375663 OGFRQ9NZT2 677 aa19.37■□□□□ 0.69
VARS-215ENST00000375663 U2AF2P26368 475 aaKnown RBP eCLIP19.37■□□□□ 0.694e-14■■□□□ 11.8
VARS-215ENST00000375663 IGHMBP2P38935 993 aaKnown RBP19.37■□□□□ 0.69
VARS-215ENST00000375663 IL15P40933 162 aaPredicted RBP19.37■□□□□ 0.69
VARS-215ENST00000375663 FAM160A1Q05DH4 1040 aa19.37■□□□□ 0.69
VARS-215ENST00000375663 SYT10Q6XYQ8 523 aa19.37■□□□□ 0.69
VARS-215ENST00000375663 A0A1B0GVL5 298 aa19.37■□□□□ 0.69
VARS-215ENST00000375663 PRC1O43663 620 aa19.37■□□□□ 0.69
VARS-215ENST00000375663 SBNO1A3KN83 1393 aa19.37■□□□□ 0.69
VARS-215ENST00000375663 GPTP24298 496 aa19.37■□□□□ 0.69
VARS-215ENST00000375663 KLHDC4Q8TBB5 520 aa19.37■□□□□ 0.69
VARS-215ENST00000375663 DDX21Q9NR30 783 aaKnown RBP eCLIP19.37■□□□□ 0.69
VARS-215ENST00000375663 MYO5CQ9NQX4 1742 aa19.36■□□□□ 0.69
VARS-215ENST00000375663 ME3Q16798 604 aa19.36■□□□□ 0.69
VARS-215ENST00000375663 ERBB4Q15303 1308 aa19.36■□□□□ 0.69
VARS-215ENST00000375663 ANKRD18BA2A2Z9 1011 aa19.36■□□□□ 0.69
VARS-215ENST00000375663 ZBTB43O43298 467 aa19.36■□□□□ 0.69
VARS-215ENST00000375663 ZNF853P0CG23 659 aa19.36■□□□□ 0.69
VARS-215ENST00000375663 ARFGAP3Q9NP61 516 aa19.36■□□□□ 0.69
VARS-215ENST00000375663 KRT28Q7Z3Y7 464 aa19.36■□□□□ 0.69
VARS-215ENST00000375663 TRMT112Q9UI30 125 aaKnown RBP19.36■□□□□ 0.69
VARS-215ENST00000375663 HOXB7P09629 217 aa19.35■□□□□ 0.69
VARS-215ENST00000375663 CCDC129Q6ZRS4 1044 aa19.35■□□□□ 0.69
VARS-215ENST00000375663 RNF41Q9H4P4 317 aaPredicted RBP19.35■□□□□ 0.69
VARS-215ENST00000375663 MTMR6Q9Y217 621 aa19.35■□□□□ 0.69
VARS-215ENST00000375663 RANBP6O60518 1105 aaKnown RBP19.35■□□□□ 0.69
VARS-215ENST00000375663 TUBB4AP04350 444 aa19.35■□□□□ 0.69
VARS-215ENST00000375663 SOGA3Q5TF21 947 aa19.35■□□□□ 0.69
VARS-215ENST00000375663 TMOD3Q9NYL9 352 aa19.35■□□□□ 0.69
VARS-215ENST00000375663 UNC5CLQ8IV45 518 aa19.35■□□□□ 0.69
VARS-215ENST00000375663 TIGD1Q96MW7 591 aa19.35■□□□□ 0.69
VARS-215ENST00000375663 BCL2L12Q9HB09 334 aa19.35■□□□□ 0.69
VARS-215ENST00000375663 KRT18P05783 430 aaKnown RBP19.34■□□□□ 0.69
VARS-215ENST00000375663 CUL4AQ13619 759 aa19.34■□□□□ 0.69
VARS-215ENST00000375663 TTF1Q15361 905 aaPredicted RBP19.34■□□□□ 0.69
VARS-215ENST00000375663 KANK3Q6NY19 840 aa19.34■□□□□ 0.69
VARS-215ENST00000375663 CTCFLQ8NI51 663 aaPredicted RBP19.34■□□□□ 0.69
VARS-215ENST00000375663 KIAA0754O94854 1291 aa19.34■□□□□ 0.69
VARS-215ENST00000375663 MAP9Q49MG5 647 aa19.34■□□□□ 0.69
VARS-215ENST00000375663 ATL3Q6DD88 541 aa19.34■□□□□ 0.69
VARS-215ENST00000375663 IQCA1Q86XH1 822 aa19.34■□□□□ 0.69
VARS-215ENST00000375663 LGR6Q9HBX8 967 aa19.34■□□□□ 0.69
VARS-215ENST00000375663 RGS12O14924 1447 aa19.34■□□□□ 0.69
VARS-215ENST00000375663 LMAN1P49257 510 aa19.34■□□□□ 0.69
VARS-215ENST00000375663 LIG1P18858 919 aa19.34■□□□□ 0.69
VARS-215ENST00000375663 SRRTQ9BXP5 876 aaKnown RBP19.34■□□□□ 0.69
VARS-215ENST00000375663 PTH1RQ03431 593 aa19.33■□□□□ 0.69
VARS-215ENST00000375663 TXLNBQ8N3L3 684 aa19.33■□□□□ 0.69
VARS-215ENST00000375663 GOLGA6L10A6NI86 522 aa19.33■□□□□ 0.68
VARS-215ENST00000375663 JAK2O60674 1132 aa19.33■□□□□ 0.68
VARS-215ENST00000375663 YEATS4O95619 227 aa19.33■□□□□ 0.68
VARS-215ENST00000375663 NFATC2IPQ8NCF5 419 aa19.33■□□□□ 0.68
VARS-215ENST00000375663 RNMTO43148 476 aaKnown RBP19.33■□□□□ 0.68
VARS-215ENST00000375663 STAP2Q9UGK3 403 aa19.33■□□□□ 0.68
VARS-215ENST00000375663 MFSD6Q6ZSS7 791 aa19.32■□□□□ 0.68
VARS-215ENST00000375663 RASEFQ8IZ41 740 aa19.32■□□□□ 0.68
VARS-215ENST00000375663 ERO1AQ96HE7 468 aa19.32■□□□□ 0.68
VARS-215ENST00000375663 CENPHQ9H3R5 247 aa19.32■□□□□ 0.68
VARS-215ENST00000375663 ZHX3Q9H4I2 956 aa19.32■□□□□ 0.68
VARS-215ENST00000375663 POTEB2H3BUK9 544 aa19.32■□□□□ 0.68
VARS-215ENST00000375663 SPA17Q15506 151 aa19.32■□□□□ 0.68
VARS-215ENST00000375663 PREX2Q70Z35 1606 aa19.32■□□□□ 0.68
VARS-215ENST00000375663 RNF113AO15541 343 aaKnown RBP19.32■□□□□ 0.68
VARS-215ENST00000375663 SSBP05455 408 aaKnown RBP eCLIP19.32■□□□□ 0.68
VARS-215ENST00000375663 SLC5A1P13866 664 aa19.32■□□□□ 0.68
VARS-215ENST00000375663 IP6K1Q92551 441 aa19.32■□□□□ 0.68
VARS-215ENST00000375663 N4BP3O15049 544 aa19.32■□□□□ 0.68
VARS-215ENST00000375663 DBNDD2Q9BQY9 259 aa19.32■□□□□ 0.68
VARS-215ENST00000375663 NCOA5Q9HCD5 579 aaKnown RBP19.32■□□□□ 0.68
VARS-215ENST00000375663 BRAPQ7Z569 592 aa19.31■□□□□ 0.68
VARS-215ENST00000375663 CDC42BPAQ5VT25 1732 aa19.31■□□□□ 0.68
VARS-215ENST00000375663 RDXP35241 583 aaKnown RBP19.31■□□□□ 0.68
VARS-215ENST00000375663 ATP2B3Q16720 1220 aa19.31■□□□□ 0.68
VARS-215ENST00000375663 NSFL1CQ9UNZ2 370 aaKnown RBP19.31■□□□□ 0.68
VARS-215ENST00000375663 CHRNA2Q15822 529 aa19.31■□□□□ 0.68
VARS-215ENST00000375663 TTC6Q86TZ1 520 aa19.31■□□□□ 0.68
VARS-215ENST00000375663 FAM135BQ49AJ0 1406 aa19.31■□□□□ 0.68
VARS-215ENST00000375663 SUCLG2Q96I99 432 aa19.3■□□□□ 0.68
VARS-215ENST00000375663 HSP90AB3PQ58FF7 597 aa19.3■□□□□ 0.68
VARS-215ENST00000375663 LLPHQ9BRT6 129 aaKnown RBP19.3■□□□□ 0.68
VARS-215ENST00000375663 TIMM10P62072 90 aa19.3■□□□□ 0.68
VARS-215ENST00000375663 MCM6Q14566 821 aa19.3■□□□□ 0.68
VARS-215ENST00000375663 SLC9C2Q5TAH2 1124 aa19.3■□□□□ 0.68
VARS-215ENST00000375663 IL17REQ8NFR9 667 aa19.3■□□□□ 0.68
VARS-215ENST00000375663 AFMP43652 599 aa19.29■□□□□ 0.68
VARS-215ENST00000375663 NLRP5P59047 1200 aa19.29■□□□□ 0.68
VARS-215ENST00000375663 LRMPQ12912 555 aa19.29■□□□□ 0.68
VARS-215ENST00000375663 CT47A1Q5JQC4 288 aaPredicted RBP19.29■□□□□ 0.68
VARS-215ENST00000375663 CATIPQ7Z7H3 387 aa19.29■□□□□ 0.68
VARS-215ENST00000375663 TNNI3KQ59H18 835 aa19.29■□□□□ 0.68
VARS-215ENST00000375663 FPGT-TNNI3KV9GXZ4 949 aa19.29■□□□□ 0.68
VARS-215ENST00000375663 MCM3P25205 808 aa19.29■□□□□ 0.68
VARS-215ENST00000375663 UTP14AQ9BVJ6 771 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms