RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 KRTAP4-12Q9BQ66 201 aa8.7□□□□□ -1.02
PMS1-202ENST00000374826 RBSNQ9H1K0 784 aa8.7□□□□□ -1.02
PMS1-202ENST00000374826 SRA1Q9HD15 236 aaKnown RBP8.7□□□□□ -1.02
PMS1-202ENST00000374826 NLRP13Q86W25 1043 aa8.69□□□□□ -1.02
PMS1-202ENST00000374826 MAP4K3Q8IVH8 894 aa8.69□□□□□ -1.02
PMS1-202ENST00000374826 PRIMPOLQ96LW4 560 aa8.69□□□□□ -1.02
PMS1-202ENST00000374826 FSTP19883 344 aa8.68□□□□□ -1.02
PMS1-202ENST00000374826 ETFBKMTQ8IXQ9 262 aa8.68□□□□□ -1.02
PMS1-202ENST00000374826 CACTIN-AS1Q8N1I8 211 aa8.68□□□□□ -1.02
PMS1-202ENST00000374826 DCAF11Q8TEB1 546 aa8.68□□□□□ -1.02
PMS1-202ENST00000374826 BRD2P25440 801 aaKnown RBP8.67□□□□□ -1.02
PMS1-202ENST00000374826 SAP130Q9H0E3 1048 aa8.67□□□□□ -1.02
PMS1-202ENST00000374826 MUC3BQ9H195 1237 aa8.67□□□□□ -1.02
PMS1-202ENST00000374826 NOVA2Q9UNW9 492 aaKnown RBP8.67□□□□□ -1.02
PMS1-202ENST00000374826 TRIM33Q9UPN9 1127 aa8.67□□□□□ -1.02
PMS1-202ENST00000374826 SWI5Q1ZZU3 235 aa8.66□□□□□ -1.02
PMS1-202ENST00000374826 LCE3BQ5TA77 95 aa8.66□□□□□ -1.02
PMS1-202ENST00000374826 Q6ZS46 218 aa8.66□□□□□ -1.02
PMS1-202ENST00000374826 PPME1Q9Y570 386 aa8.66□□□□□ -1.02
PMS1-202ENST00000374826 ACIN1Q9UKV3 1341 aaKnown RBP8.65□□□□□ -1.02
PMS1-202ENST00000374826 TRIP4Q15650 581 aaPredicted RBP8.65□□□□□ -1.02
PMS1-202ENST00000374826 C16orf46Q6P387 395 aa8.65□□□□□ -1.02
PMS1-202ENST00000374826 PCMTD2Q9NV79 361 aa8.65□□□□□ -1.02
PMS1-202ENST00000374826 PRMT3O60678 531 aa8.64□□□□□ -1.03
PMS1-202ENST00000374826 OCLNQ16625 522 aa8.64□□□□□ -1.03
PMS1-202ENST00000374826 FAM26DQ5JW98 314 aa8.64□□□□□ -1.03
PMS1-202ENST00000374826 AGGF1Q8N302 714 aaeCLIP8.64□□□□□ -1.03
PMS1-202ENST00000374826 PIK3R5Q8WYR1 880 aa8.64□□□□□ -1.03
PMS1-202ENST00000374826 UBAP1LF5GYI3 381 aa8.63□□□□□ -1.03
PMS1-202ENST00000374826 GLB1P16278 677 aa8.63□□□□□ -1.03
PMS1-202ENST00000374826 SSTR4P31391 388 aa8.63□□□□□ -1.03
PMS1-202ENST00000374826 FAM69CQ0P6D2 419 aa8.63□□□□□ -1.03
PMS1-202ENST00000374826 GALNT11Q8NCW6 608 aa8.63□□□□□ -1.03
PMS1-202ENST00000374826 OR13H1Q8NG92 308 aa8.63□□□□□ -1.03
PMS1-202ENST00000374826 COL26A1Q96A83 441 aa8.63□□□□□ -1.03
PMS1-202ENST00000374826 UBL7Q96S82 380 aaPredicted RBP8.63□□□□□ -1.03
PMS1-202ENST00000374826 RAXQ9Y2V3 346 aa8.63□□□□□ -1.03
PMS1-202ENST00000374826 RB1CC1Q8TDY2 1594 aa8.62□□□□□ -1.03
PMS1-202ENST00000374826 LINC01387J3KSC0 135 aa8.62□□□□□ -1.03
PMS1-202ENST00000374826 COL13A1Q5TAT6 717 aaPredicted RBP8.62□□□□□ -1.03
PMS1-202ENST00000374826 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.62□□□□□ -1.03
PMS1-202ENST00000374826 FAM13BQ9NYF5 915 aa8.62□□□□□ -1.03
PMS1-202ENST00000374826 UNC13AQ9UPW8 1703 aa8.62□□□□□ -1.03
PMS1-202ENST00000374826 CD97P48960 835 aa8.61□□□□□ -1.03
PMS1-202ENST00000374826 HYAL2Q12891 473 aa8.61□□□□□ -1.03
PMS1-202ENST00000374826 ELOAQ14241 798 aaKnown RBP8.61□□□□□ -1.03
PMS1-202ENST00000374826 STOML1Q9UBI4 398 aa8.61□□□□□ -1.03
PMS1-202ENST00000374826 ZCCHC6Q5VYS8 1495 aaKnown RBP8.61□□□□□ -1.03
PMS1-202ENST00000374826 TNFRSF10BO14763 440 aa8.6□□□□□ -1.03
PMS1-202ENST00000374826 PTCD1O75127 700 aaKnown RBP8.6□□□□□ -1.03
PMS1-202ENST00000374826 CD68P34810 354 aaPredicted RBP8.6□□□□□ -1.03
PMS1-202ENST00000374826 CEP135Q66GS9 1140 aa8.6□□□□□ -1.03
PMS1-202ENST00000374826 MCTP1Q6DN14 999 aa8.6□□□□□ -1.03
PMS1-202ENST00000374826 CAPN12Q6ZSI9 719 aa8.6□□□□□ -1.03
PMS1-202ENST00000374826 SPACA7Q96KW9 195 aa8.6□□□□□ -1.03
PMS1-202ENST00000374826 ZMIZ1Q9ULJ6 1067 aa8.6□□□□□ -1.03
PMS1-202ENST00000374826 FNDC3AQ9Y2H6 1198 aaKnown RBP8.6□□□□□ -1.03
PMS1-202ENST00000374826 NACADO15069 1562 aa8.6□□□□□ -1.03
PMS1-202ENST00000374826 COL17A1Q9UMD9 1497 aaPredicted RBP8.59□□□□□ -1.03
PMS1-202ENST00000374826 ARID3CA6NKF2 412 aa8.59□□□□□ -1.03
PMS1-202ENST00000374826 TM4SF5O14894 197 aa8.59□□□□□ -1.03
PMS1-202ENST00000374826 GSC2O15499 205 aa8.59□□□□□ -1.03
PMS1-202ENST00000374826 MED26O95402 600 aa8.59□□□□□ -1.03
PMS1-202ENST00000374826 IGLV1-40P01703 118 aa8.59□□□□□ -1.03
PMS1-202ENST00000374826 TTC39BQ5VTQ0 682 aaPredicted RBP8.59□□□□□ -1.03
PMS1-202ENST00000374826 CCDC97Q96F63 343 aaPredicted RBP8.59□□□□□ -1.03
PMS1-202ENST00000374826 LACRTQ9GZZ8 138 aa8.59□□□□□ -1.03
PMS1-202ENST00000374826 DHX15O43143 795 aaKnown RBP8.58□□□□□ -1.04
PMS1-202ENST00000374826 SMNDC1O75940 238 aaKnown RBP eCLIP8.58□□□□□ -1.04
PMS1-202ENST00000374826 WISP1O95388 367 aa8.58□□□□□ -1.04
PMS1-202ENST00000374826 CDC27P30260 824 aa8.58□□□□□ -1.04
PMS1-202ENST00000374826 ATP11AP98196 1134 aa8.58□□□□□ -1.04
PMS1-202ENST00000374826 NAA30Q147X3 362 aaPredicted RBP8.58□□□□□ -1.04
PMS1-202ENST00000374826 ARMC10Q8N2F6 343 aa8.58□□□□□ -1.04
PMS1-202ENST00000374826 KCNK4Q9NYG8 393 aa8.58□□□□□ -1.04
PMS1-202ENST00000374826 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.57□□□□□ -1.04
PMS1-202ENST00000374826 SCNN1AP37088 669 aa8.57□□□□□ -1.04
PMS1-202ENST00000374826 ZAP70P43403 619 aa8.57□□□□□ -1.04
PMS1-202ENST00000374826 TXNDC11Q6PKC3 985 aa8.57□□□□□ -1.04
PMS1-202ENST00000374826 C14orf37Q86TY3 774 aa8.57□□□□□ -1.04
PMS1-202ENST00000374826 CEP41Q9BYV8 373 aa8.57□□□□□ -1.04
PMS1-202ENST00000374826 SERPINA10Q9UK55 444 aa8.57□□□□□ -1.04
PMS1-202ENST00000374826 COBLO75128 1261 aa8.56□□□□□ -1.04
PMS1-202ENST00000374826 KIF4AO95239 1232 aa8.56□□□□□ -1.04
PMS1-202ENST00000374826 SRPK2P78362 688 aaKnown RBP8.56□□□□□ -1.04
PMS1-202ENST00000374826 ADAMTSL4Q6UY14 1074 aa8.56□□□□□ -1.04
PMS1-202ENST00000374826 ACAD11Q709F0 780 aa8.56□□□□□ -1.04
PMS1-202ENST00000374826 KRTAP19-1Q8IUB9 90 aa8.56□□□□□ -1.04
PMS1-202ENST00000374826 GPR152Q8TDT2 470 aa8.56□□□□□ -1.04
PMS1-202ENST00000374826 STK32AQ8WU08 396 aa8.56□□□□□ -1.04
PMS1-202ENST00000374826 MKNK1Q9BUB5 465 aa8.56□□□□□ -1.04
PMS1-202ENST00000374826 RASSF4Q9H2L5 321 aa8.56□□□□□ -1.04
PMS1-202ENST00000374826 GOLGA2P5Q9HBQ8 144 aa8.56□□□□□ -1.04
PMS1-202ENST00000374826 CXXC1Q9P0U4 656 aaPredicted RBP8.56□□□□□ -1.04
PMS1-202ENST00000374826 FSCN2O14926 492 aa8.55□□□□□ -1.04
PMS1-202ENST00000374826 ZBTB39O15060 712 aa8.55□□□□□ -1.04
PMS1-202ENST00000374826 TGFB1P01137 390 aa8.55□□□□□ -1.04
PMS1-202ENST00000374826 CDC25BP30305 580 aa8.55□□□□□ -1.04
PMS1-202ENST00000374826 KIAA1211Q6ZU35 1233 aa8.55□□□□□ -1.04
PMS1-202ENST00000374826 CEP120Q8N960 986 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms