RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 MCMDC2Q4G0Z9 681 aa16.04■□□□□ 0.16
CSTF2-201ENST00000372972 USPL1Q5W0Q7 1092 aa16.04■□□□□ 0.16
CSTF2-201ENST00000372972 PAG1Q9NWQ8 432 aa16.04■□□□□ 0.16
CSTF2-201ENST00000372972 ZNF609O15014 1411 aa16.04■□□□□ 0.16
CSTF2-201ENST00000372972 GPTP24298 496 aa16.04■□□□□ 0.16
CSTF2-201ENST00000372972 TAF7LQ5H9L4 462 aa16.04■□□□□ 0.16
CSTF2-201ENST00000372972 SH2B1Q9NRF2 756 aaPredicted RBP16.04■□□□□ 0.16
CSTF2-201ENST00000372972 MYH14Q7Z406 1995 aaKnown RBP16.03■□□□□ 0.16
CSTF2-201ENST00000372972 RPAP1Q9BWH6 1393 aaPredicted RBP16.03■□□□□ 0.16
CSTF2-201ENST00000372972 GOLIM4O00461 696 aa16.03■□□□□ 0.16
CSTF2-201ENST00000372972 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.03■□□□□ 0.16
CSTF2-201ENST00000372972 LARP6Q9BRS8 491 aaKnown RBP16.03■□□□□ 0.16
CSTF2-201ENST00000372972 BRPF3Q9ULD4 1205 aa16.03■□□□□ 0.16
CSTF2-201ENST00000372972 NUP98P52948 1817 aa16.03■□□□□ 0.16
CSTF2-201ENST00000372972 WDR33Q9C0J8 1336 aaKnown RBP16.03■□□□□ 0.16
CSTF2-201ENST00000372972 PRPF40AO75400 957 aaKnown RBP16.02■□□□□ 0.16
CSTF2-201ENST00000372972 IFIT1P09914 478 aaKnown RBP16.02■□□□□ 0.16
CSTF2-201ENST00000372972 FOXD4L5Q5VV16 416 aaPredicted RBP16.02■□□□□ 0.16
CSTF2-201ENST00000372972 SEPT12Q8IYM1 358 aa16.02■□□□□ 0.16
CSTF2-201ENST00000372972 SYNE4Q8N205 404 aa16.02■□□□□ 0.16
CSTF2-201ENST00000372972 FOXD4L4Q8WXT5 416 aaPredicted RBP16.02■□□□□ 0.16
CSTF2-201ENST00000372972 QTRT2Q9H974 415 aaKnown RBP16.02■□□□□ 0.16
CSTF2-201ENST00000372972 ANKRD36CQ5JPF3 1778 aa16.02■□□□□ 0.16
CSTF2-201ENST00000372972 ZNF831Q5JPB2 1677 aa16.02■□□□□ 0.16
CSTF2-201ENST00000372972 BLOC1S2Q6QNY1 142 aa16.02■□□□□ 0.15
CSTF2-201ENST00000372972 TTLL11Q8NHH1 800 aa16.02■□□□□ 0.15
CSTF2-201ENST00000372972 CCDC85AQ96PX6 553 aaPredicted RBP16.02■□□□□ 0.15
CSTF2-201ENST00000372972 ALDH8A1Q9H2A2 487 aaPredicted RBP16.02■□□□□ 0.15
CSTF2-201ENST00000372972 HELLSQ9NRZ9 838 aa16.02■□□□□ 0.15
CSTF2-201ENST00000372972 TRMT112Q9UI30 125 aaKnown RBP16.02■□□□□ 0.15
CSTF2-201ENST00000372972 U3KPZ7 1027 aaPredicted RBP16.02■□□□□ 0.15
CSTF2-201ENST00000372972 BTAF1O14981 1849 aa16.02■□□□□ 0.15
CSTF2-201ENST00000372972 NHSQ6T4R5 1651 aa16.01■□□□□ 0.15
CSTF2-201ENST00000372972 SH3TC1Q8TE82 1336 aa16.01■□□□□ 0.15
CSTF2-201ENST00000372972 COL5A3P25940 1745 aaPredicted RBP16.01■□□□□ 0.15
CSTF2-201ENST00000372972 XRCC6P12956 609 aaKnown RBP eCLIP16.01■□□□□ 0.15
CSTF2-201ENST00000372972 MRE11P49959 708 aa16.01■□□□□ 0.15
CSTF2-201ENST00000372972 KCNQ4P56696 695 aa16.01■□□□□ 0.15
CSTF2-201ENST00000372972 KRT32Q14532 448 aa16.01■□□□□ 0.15
CSTF2-201ENST00000372972 ANKRD1Q15327 319 aa16.01■□□□□ 0.15
CSTF2-201ENST00000372972 CCDC158Q5M9N0 1113 aa16.01■□□□□ 0.15
CSTF2-201ENST00000372972 LINC00116Q8NCU8 138 aa16.01■□□□□ 0.15
CSTF2-201ENST00000372972 SEC62Q99442 399 aaKnown RBP16.01■□□□□ 0.15
CSTF2-201ENST00000372972 SMC3Q9UQE7 1217 aa16.01■□□□□ 0.15
CSTF2-201ENST00000372972 IRS4O14654 1257 aaPredicted RBP16■□□□□ 0.15
CSTF2-201ENST00000372972 CTSWP56202 376 aa16■□□□□ 0.15
CSTF2-201ENST00000372972 GORABQ5T7V8 394 aa16■□□□□ 0.15
CSTF2-201ENST00000372972 LARGE1O95461 756 aa16■□□□□ 0.15
CSTF2-201ENST00000372972 CHGBP05060 677 aa16■□□□□ 0.15
CSTF2-201ENST00000372972 ITGA6P23229 1130 aa16■□□□□ 0.15
CSTF2-201ENST00000372972 RPS6KB1P23443 525 aa16■□□□□ 0.15
CSTF2-201ENST00000372972 CCDC129Q6ZRS4 1044 aa16■□□□□ 0.15
CSTF2-201ENST00000372972 ZNF34Q8IZ26 560 aa16■□□□□ 0.15
CSTF2-201ENST00000372972 XAGE2Q96GT9 111 aa16■□□□□ 0.15
CSTF2-201ENST00000372972 ANKRD18BA2A2Z9 1011 aa15.99■□□□□ 0.15
CSTF2-201ENST00000372972 PDE8AO60658 829 aa15.99■□□□□ 0.15
CSTF2-201ENST00000372972 CAMTA2O94983 1202 aa15.99■□□□□ 0.15
CSTF2-201ENST00000372972 ZMYM1Q5SVZ6 1142 aa15.99■□□□□ 0.15
CSTF2-201ENST00000372972 LDHAL6AQ6ZMR3 332 aa15.99■□□□□ 0.15
CSTF2-201ENST00000372972 GREM2Q9H772 168 aa15.99■□□□□ 0.15
CSTF2-201ENST00000372972 RIPOR2Q9Y4F9 1068 aa15.99■□□□□ 0.15
CSTF2-201ENST00000372972 NCLP19338 710 aaKnown RBP15.98■□□□□ 0.15
CSTF2-201ENST00000372972 ME3Q16798 604 aa15.98■□□□□ 0.15
CSTF2-201ENST00000372972 TTC39AQ5SRH9 613 aa15.98■□□□□ 0.15
CSTF2-201ENST00000372972 CCDC83Q8IWF9 413 aa15.98■□□□□ 0.15
CSTF2-201ENST00000372972 TAF6LQ9Y6J9 622 aa15.98■□□□□ 0.15
CSTF2-201ENST00000372972 UBN2Q6ZU65 1347 aa15.98■□□□□ 0.15
CSTF2-201ENST00000372972 RNF113AO15541 343 aaKnown RBP15.98■□□□□ 0.15
CSTF2-201ENST00000372972 LRRFIP1Q32MZ4 808 aaKnown RBP15.98■□□□□ 0.15
CSTF2-201ENST00000372972 CHAMP1Q96JM3 812 aa15.98■□□□□ 0.15
CSTF2-201ENST00000372972 GRPEL1Q9HAV7 217 aa15.98■□□□□ 0.15
CSTF2-201ENST00000372972 TPCN1Q9ULQ1 816 aa15.98■□□□□ 0.15
CSTF2-201ENST00000372972 SBF2Q86WG5 1849 aa15.97■□□□□ 0.15
CSTF2-201ENST00000372972 STX6O43752 255 aa15.97■□□□□ 0.15
CSTF2-201ENST00000372972 SYT1P21579 422 aa15.97■□□□□ 0.15
CSTF2-201ENST00000372972 ADORA1P30542 326 aa15.97■□□□□ 0.15
CSTF2-201ENST00000372972 METTL24Q5JXM2 366 aa15.97■□□□□ 0.15
CSTF2-201ENST00000372972 AK7Q96M32 723 aa15.97■□□□□ 0.15
CSTF2-201ENST00000372972 ZSCAN22P10073 491 aaPredicted RBP15.96■□□□□ 0.15
CSTF2-201ENST00000372972 FKBP4Q02790 459 aaKnown RBP eCLIP15.96■□□□□ 0.15
CSTF2-201ENST00000372972 GAS2L3Q86XJ1 694 aa15.96■□□□□ 0.15
CSTF2-201ENST00000372972 NEK1Q96PY6 1258 aa15.96■□□□□ 0.15
CSTF2-201ENST00000372972 DSCC1Q9BVC3 393 aa15.96■□□□□ 0.15
CSTF2-201ENST00000372972 CNNM1Q9NRU3 951 aa15.96■□□□□ 0.15
CSTF2-201ENST00000372972 CNTNAP4Q9C0A0 1308 aa15.96■□□□□ 0.15
CSTF2-201ENST00000372972 GJB2P29033 226 aa15.96■□□□□ 0.15
CSTF2-201ENST00000372972 COL9A3Q14050 684 aaPredicted RBP15.96■□□□□ 0.15
CSTF2-201ENST00000372972 ATP2B3Q16720 1220 aa15.96■□□□□ 0.15
CSTF2-201ENST00000372972 CAVIN1Q6NZI2 390 aaKnown RBP15.96■□□□□ 0.15
CSTF2-201ENST00000372972 GPT2Q8TD30 523 aa15.96■□□□□ 0.15
CSTF2-201ENST00000372972 SPEF2Q9C093 1822 aa15.96■□□□□ 0.14
CSTF2-201ENST00000372972 CYP21A2P08686 494 aa15.95■□□□□ 0.14
CSTF2-201ENST00000372972 TOB2Q14106 344 aaPredicted RBP15.95■□□□□ 0.14
CSTF2-201ENST00000372972 MBD3O95983 291 aa15.95■□□□□ 0.14
CSTF2-201ENST00000372972 ZFYP08048 801 aaPredicted RBP15.95■□□□□ 0.14
CSTF2-201ENST00000372972 PDIA4P13667 645 aaKnown RBP15.95■□□□□ 0.14
CSTF2-201ENST00000372972 ST3GAL1Q11201 340 aa15.95■□□□□ 0.14
CSTF2-201ENST00000372972 SLFNL1Q499Z3 407 aa15.95■□□□□ 0.14
CSTF2-201ENST00000372972 SUSD4Q5VX71 490 aa15.95■□□□□ 0.14
CSTF2-201ENST00000372972 NECAB1Q8N987 351 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms