RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PPP4R3BQ5MIZ7 849 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 SKAP1Q86WV1 359 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 CNBD1Q8NA66 436 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 TIGD1Q96MW7 591 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 VAT1LQ9HCJ6 419 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 KIF5CO60282 957 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 BAG4O95429 457 aaKnown RBP15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 UVSSAQ2YD98 709 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 CCDC178Q5BJE1 867 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 TSHZ3Q63HK5 1081 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 USP25Q9UHP3 1055 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 TSPY3P0CV98 308 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 TSPY8P0CW00 308 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 TTC22Q5TAA0 569 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 CTR9Q6PD62 1173 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 TAF4BQ92750 862 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 MPHOSPH6Q99547 160 aaKnown RBP15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 FAM107BQ9H098 131 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 HMG20BQ9P0W2 317 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 PICALMQ13492 652 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 LIMCH1Q9UPQ0 1083 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 CHD1O14646 1710 aa15.3■□□□□ 0.04
RAPGEF1-201ENST00000372189 TRIM21P19474 475 aaKnown RBP15.29■□□□□ 0.04
RAPGEF1-201ENST00000372189 TSPOAP1O95153 1857 aa15.29■□□□□ 0.04
RAPGEF1-201ENST00000372189 EIF5P55010 431 aaKnown RBP15.29■□□□□ 0.04
RAPGEF1-201ENST00000372189 CCT2P78371 535 aaKnown RBP15.29■□□□□ 0.04
RAPGEF1-201ENST00000372189 ABCA8O94911 1581 aa15.29■□□□□ 0.04
RAPGEF1-201ENST00000372189 URI1O94763 535 aaPredicted RBP15.29■□□□□ 0.04
RAPGEF1-201ENST00000372189 ZNF790Q6PG37 636 aa15.29■□□□□ 0.04
RAPGEF1-201ENST00000372189 FERMT3Q86UX7 667 aa15.29■□□□□ 0.04
RAPGEF1-201ENST00000372189 TAX1BP1Q86VP1 789 aa15.29■□□□□ 0.04
RAPGEF1-201ENST00000372189 ZNF397Q8NF99 534 aaPredicted RBP15.29■□□□□ 0.04
RAPGEF1-201ENST00000372189 RIMBP2O15034 1052 aa15.29■□□□□ 0.04
RAPGEF1-201ENST00000372189 PRIMPOLQ96LW4 560 aa15.29■□□□□ 0.04
RAPGEF1-201ENST00000372189 CWF19L2Q2TBE0 894 aaKnown RBP15.29■□□□□ 0.04
RAPGEF1-201ENST00000372189 KRT23Q9C075 422 aa15.29■□□□□ 0.04
RAPGEF1-201ENST00000372189 FAM184BQ9ULE4 1060 aa15.28■□□□□ 0.04
RAPGEF1-201ENST00000372189 PPP1R12BO60237 982 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF1-201ENST00000372189 GSDMDP57764 484 aa15.28■□□□□ 0.04
RAPGEF1-201ENST00000372189 CCDC144CPQ8IYA2 1237 aa15.28■□□□□ 0.04
RAPGEF1-201ENST00000372189 NEK1Q96PY6 1258 aa15.28■□□□□ 0.04
RAPGEF1-201ENST00000372189 DDX19AQ9NUU7 478 aaKnown RBP15.28■□□□□ 0.04
RAPGEF1-201ENST00000372189 TOP1P11387 765 aaKnown RBP15.28■□□□□ 0.04
RAPGEF1-201ENST00000372189 GUCY1B3Q02153 619 aa15.28■□□□□ 0.04
RAPGEF1-201ENST00000372189 KLHL40Q2TBA0 621 aa15.28■□□□□ 0.04
RAPGEF1-201ENST00000372189 PARP10Q53GL7 1025 aa15.28■□□□□ 0.04
RAPGEF1-201ENST00000372189 PRIM1P49642 420 aaKnown RBP15.27■□□□□ 0.04
RAPGEF1-201ENST00000372189 CCDC91Q7Z6B0 441 aa15.27■□□□□ 0.04
RAPGEF1-201ENST00000372189 TBC1D32Q96NH3 1257 aa15.27■□□□□ 0.04
RAPGEF1-201ENST00000372189 VEZTQ9HBM0 779 aa15.27■□□□□ 0.04
RAPGEF1-201ENST00000372189 IL13P35225 146 aa15.27■□□□□ 0.04
RAPGEF1-201ENST00000372189 BMP2KLQ5H9B9 411 aa15.27■□□□□ 0.04
RAPGEF1-201ENST00000372189 ANKRD44Q8N8A2 993 aa15.27■□□□□ 0.04
RAPGEF1-201ENST00000372189 USP16Q9Y5T5 823 aa15.27■□□□□ 0.04
RAPGEF1-201ENST00000372189 MAGEB6P1A0A0J9YX57 407 aa15.27■□□□□ 0.03
RAPGEF1-201ENST00000372189 IARSP41252 1262 aaKnown RBP15.27■□□□□ 0.03
RAPGEF1-201ENST00000372189 METAP2P50579 478 aaKnown RBP eCLIP15.27■□□□□ 0.03
RAPGEF1-201ENST00000372189 JAKMIP3Q5VZ66 844 aa15.27■□□□□ 0.03
RAPGEF1-201ENST00000372189 DDX21Q9NR30 783 aaKnown RBP eCLIP15.27■□□□□ 0.03
RAPGEF1-201ENST00000372189 LMOD1P29536 600 aaPredicted RBP15.27■□□□□ 0.03
RAPGEF1-201ENST00000372189 RBM26Q5T8P6 1007 aaKnown RBP15.27■□□□□ 0.03
RAPGEF1-201ENST00000372189 SLC52A2Q9HAB3 445 aa15.27■□□□□ 0.03
RAPGEF1-201ENST00000372189 BABAM1Q9NWV8 329 aa15.27■□□□□ 0.03
RAPGEF1-201ENST00000372189 POTEB2H3BUK9 544 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 ADCY5O95622 1261 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 HDAC1Q13547 482 aaPredicted RBP15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 MKL2Q9ULH7 1088 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 KDM5DQ9BY66 1539 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 APBA3O96018 575 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 SLC9C2Q5TAH2 1124 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 TBC1D9Q6ZT07 1266 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 STX8Q9UNK0 236 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 NPHP4O75161 1426 aaPredicted RBP15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 PLCG2P16885 1265 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 CLCN1P35523 988 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 PLBD2Q8NHP8 589 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 CNNM2Q9H8M5 875 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 PA2G4Q9UQ80 394 aaKnown RBP15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 VAMP4O75379 141 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 NUCB1Q02818 461 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 TSPYL6Q8N831 410 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 MAGI2Q86UL8 1455 aa15.26■□□□□ 0.03
RAPGEF1-201ENST00000372189 PLEKHG3A1L390 1219 aa15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 KIF4BQ2VIQ3 1234 aa15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 MICU3Q86XE3 530 aa15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 C16orf45Q96MC5 204 aaPredicted RBP15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 EFCAB6Q5THR3 1501 aa15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 DESP17661 470 aa15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 WTAPQ15007 396 aa15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 SPA17Q15506 151 aa15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 HELBQ8NG08 1087 aaPredicted RBP15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 ESR2Q92731 530 aa15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 CCDC87Q9NVE4 849 aa15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 KRT24Q2M2I5 525 aa15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 TSG101Q99816 390 aa15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 GBP2P32456 591 aaPredicted RBP15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 GRM1Q13255 1194 aa15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 CCDC97Q96F63 343 aaPredicted RBP15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 PAG1Q9NWQ8 432 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms