RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ERC2O15083 957 aa13.79□□□□□ -0.2
TSPAN1-201ENST00000372003 ALDH1L1O75891 902 aa13.79□□□□□ -0.2
TSPAN1-201ENST00000372003 HCLS1P14317 486 aaPredicted RBP13.79□□□□□ -0.2
TSPAN1-201ENST00000372003 CCT4P50991 539 aaKnown RBP13.79□□□□□ -0.2
TSPAN1-201ENST00000372003 C9orf78Q9NZ63 289 aaPredicted RBP13.79□□□□□ -0.2
TSPAN1-201ENST00000372003 UBE3BQ7Z3V4 1068 aa13.79□□□□□ -0.2
TSPAN1-201ENST00000372003 SYAP1Q96A49 352 aaPredicted RBP13.79□□□□□ -0.2
TSPAN1-201ENST00000372003 INTS4Q96HW7 963 aaKnown RBP13.79□□□□□ -0.2
TSPAN1-201ENST00000372003 IRS4O14654 1257 aaPredicted RBP13.78□□□□□ -0.2
TSPAN1-201ENST00000372003 PCCAP05165 728 aaPredicted RBP13.78□□□□□ -0.2
TSPAN1-201ENST00000372003 SDSP20132 328 aa13.78□□□□□ -0.2
TSPAN1-201ENST00000372003 ANAPC15P60006 121 aa13.78□□□□□ -0.2
TSPAN1-201ENST00000372003 CEP85Q6P2H3 762 aa13.78□□□□□ -0.2
TSPAN1-201ENST00000372003 BRIP1Q9BX63 1249 aa13.78□□□□□ -0.2
TSPAN1-201ENST00000372003 WWC3Q9ULE0 1092 aa13.78□□□□□ -0.2
TSPAN1-201ENST00000372003 NUP98P52948 1817 aa13.78□□□□□ -0.2
TSPAN1-201ENST00000372003 ARFGEF2Q9Y6D5 1785 aa13.77□□□□□ -0.2
TSPAN1-201ENST00000372003 SRCAPQ6ZRS2 3230 aa13.77□□□□□ -0.2
TSPAN1-201ENST00000372003 ABCC12Q96J65 1359 aa13.77□□□□□ -0.2
TSPAN1-201ENST00000372003 A0A0G2JLW4 131 aa13.77□□□□□ -0.21
TSPAN1-201ENST00000372003 H7C1W4 665 aa13.77□□□□□ -0.21
TSPAN1-201ENST00000372003 GRM8O00222 908 aa13.77□□□□□ -0.21
TSPAN1-201ENST00000372003 HMMRO75330 724 aa13.77□□□□□ -0.21
TSPAN1-201ENST00000372003 PRPF40AO75400 957 aaKnown RBP13.77□□□□□ -0.21
TSPAN1-201ENST00000372003 NCLP19338 710 aaKnown RBP13.77□□□□□ -0.21
TSPAN1-201ENST00000372003 CUL4AQ13619 759 aa13.77□□□□□ -0.21
TSPAN1-201ENST00000372003 NLGN2Q8NFZ4 835 aa13.77□□□□□ -0.21
TSPAN1-201ENST00000372003 GPT2Q8TD30 523 aa13.77□□□□□ -0.21
TSPAN1-201ENST00000372003 SYT17Q9BSW7 474 aa13.77□□□□□ -0.21
TSPAN1-201ENST00000372003 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.77□□□□□ -0.21
TSPAN1-201ENST00000372003 ZDHHC9Q9Y397 364 aa13.77□□□□□ -0.21
TSPAN1-201ENST00000372003 CD2APQ9Y5K6 639 aa13.77□□□□□ -0.21
TSPAN1-201ENST00000372003 NBPF7P0C2Y1 421 aaPredicted RBP13.76□□□□□ -0.21
TSPAN1-201ENST00000372003 CHRNA5P30532 468 aa13.76□□□□□ -0.21
TSPAN1-201ENST00000372003 PDE6BP35913 854 aa13.76□□□□□ -0.21
TSPAN1-201ENST00000372003 UVSSAQ2YD98 709 aa13.76□□□□□ -0.21
TSPAN1-201ENST00000372003 SASS6Q6UVJ0 657 aa13.76□□□□□ -0.21
TSPAN1-201ENST00000372003 C3orf67Q6ZVT6 689 aa13.76□□□□□ -0.21
TSPAN1-201ENST00000372003 NLRP3Q96P20 1036 aa13.76□□□□□ -0.21
TSPAN1-201ENST00000372003 BRD1O95696 1058 aa13.75□□□□□ -0.21
TSPAN1-201ENST00000372003 DPEP1P16444 411 aa13.75□□□□□ -0.21
TSPAN1-201ENST00000372003 SLC10A5Q5PT55 438 aa13.75□□□□□ -0.21
TSPAN1-201ENST00000372003 C2CD5Q86YS7 1000 aa13.75□□□□□ -0.21
TSPAN1-201ENST00000372003 USP44Q9H0E7 712 aa13.75□□□□□ -0.21
TSPAN1-201ENST00000372003 CACNA1FO60840 1977 aa13.75□□□□□ -0.21
TSPAN1-201ENST00000372003 H0YIN7 160 aa13.75□□□□□ -0.21
TSPAN1-201ENST00000372003 MCCP23508 829 aa13.75□□□□□ -0.21
TSPAN1-201ENST00000372003 TGFB2P61812 414 aa13.75□□□□□ -0.21
TSPAN1-201ENST00000372003 FAM184AQ8NB25 1140 aa13.75□□□□□ -0.21
TSPAN1-201ENST00000372003 CCDC85AQ96PX6 553 aaPredicted RBP13.75□□□□□ -0.21
TSPAN1-201ENST00000372003 R3HCC1Q9Y3T6 440 aaKnown RBP13.75□□□□□ -0.21
TSPAN1-201ENST00000372003 C10orf71Q711Q0 1435 aa13.75□□□□□ -0.21
TSPAN1-201ENST00000372003 CASP7P55210 303 aa13.74□□□□□ -0.21
TSPAN1-201ENST00000372003 ZNF622Q969S3 477 aaKnown RBP eCLIP13.74□□□□□ -0.21
TSPAN1-201ENST00000372003 MEIS3Q99687 375 aa13.74□□□□□ -0.21
TSPAN1-201ENST00000372003 TMEM63CQ9P1W3 806 aa13.74□□□□□ -0.21
TSPAN1-201ENST00000372003 PXDNLA1KZ92 1463 aa13.73□□□□□ -0.21
TSPAN1-201ENST00000372003 CDHR2Q9BYE9 1310 aa13.73□□□□□ -0.21
TSPAN1-201ENST00000372003 UQCRHLA0A096LP55 91 aa13.73□□□□□ -0.21
TSPAN1-201ENST00000372003 PDE8AO60658 829 aa13.73□□□□□ -0.21
TSPAN1-201ENST00000372003 UQCRHP07919 91 aa13.73□□□□□ -0.21
TSPAN1-201ENST00000372003 ZGPATQ8N5A5 531 aaKnown RBP13.73□□□□□ -0.21
TSPAN1-201ENST00000372003 SUCLG2Q96I99 432 aa13.73□□□□□ -0.21
TSPAN1-201ENST00000372003 UBTFL1P0CB47 393 aaPredicted RBP13.72□□□□□ -0.21
TSPAN1-201ENST00000372003 SRGNP10124 158 aa13.72□□□□□ -0.21
TSPAN1-201ENST00000372003 HSP90B1P14625 803 aaKnown RBP13.72□□□□□ -0.21
TSPAN1-201ENST00000372003 PKP1Q13835 747 aa13.72□□□□□ -0.21
TSPAN1-201ENST00000372003 RPGRQ92834 1020 aaKnown RBP13.72□□□□□ -0.21
TSPAN1-201ENST00000372003 TSPY26PQ9H489 355 aa13.72□□□□□ -0.21
TSPAN1-201ENST00000372003 COL24A1Q17RW2 1714 aa13.72□□□□□ -0.21
TSPAN1-201ENST00000372003 KLRG2A4D1S0 409 aaPredicted RBP13.72□□□□□ -0.21
TSPAN1-201ENST00000372003 LETM1O95202 739 aaPredicted RBP13.72□□□□□ -0.21
TSPAN1-201ENST00000372003 KCNA3P22001 575 aa13.72□□□□□ -0.21
TSPAN1-201ENST00000372003 EPHA10Q5JZY3 1008 aa13.72□□□□□ -0.21
TSPAN1-201ENST00000372003 C16orf71Q8IYS4 520 aaPredicted RBP13.72□□□□□ -0.21
TSPAN1-201ENST00000372003 TMX3Q96JJ7 454 aa13.72□□□□□ -0.21
TSPAN1-201ENST00000372003 CHMP3Q9Y3E7 222 aa13.72□□□□□ -0.21
TSPAN1-201ENST00000372003 ANKRD36CQ5JPF3 1778 aa13.71□□□□□ -0.21
TSPAN1-201ENST00000372003 UTYO14607 1347 aa13.71□□□□□ -0.21
TSPAN1-201ENST00000372003 CTSWP56202 376 aa13.71□□□□□ -0.22
TSPAN1-201ENST00000372003 SMAP1Q8IYB5 467 aaPredicted RBP13.71□□□□□ -0.22
TSPAN1-201ENST00000372003 TTLL11Q8NHH1 800 aa13.71□□□□□ -0.22
TSPAN1-201ENST00000372003 MASTLQ96GX5 879 aa13.71□□□□□ -0.22
TSPAN1-201ENST00000372003 PRIMPOLQ96LW4 560 aa13.71□□□□□ -0.22
TSPAN1-201ENST00000372003 AFDNP55196 1824 aaKnown RBP13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 NRXN2Q9P2S2 1712 aa13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 AOX1Q06278 1338 aa13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 N4BP2Q86UW6 1770 aaPredicted RBP13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 SYCE3A1L190 88 aa13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 GNAI3P08754 354 aa13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 NPR1P16066 1061 aa13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 PDE1AP54750 535 aa13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 FOXO4P98177 505 aa13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 KIAA2012Q0VF49 1180 aa13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 SF3B3Q15393 1217 aaKnown RBP13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 CRY2Q49AN0 593 aa13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 LMBR1LQ6UX01 489 aa13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 DDX46Q7L014 1031 aaKnown RBP13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 TMEM87AQ8NBN3 555 aa13.7□□□□□ -0.22
TSPAN1-201ENST00000372003 RBM17Q96I25 401 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms