RNA–Protein interactions for RNA: ENST00000371217.9

TCTN3-203, Transcript of tectonic family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-203ENST00000371217 PTCD1O75127 700 aaKnown RBP11.65□□□□□ -0.54
TCTN3-203ENST00000371217 SCRN1Q12765 414 aa11.65□□□□□ -0.54
TCTN3-203ENST00000371217 PLA2G4DQ86XP0 818 aa11.65□□□□□ -0.54
TCTN3-203ENST00000371217 TDRD7Q8NHU6 1098 aaKnown RBP11.65□□□□□ -0.54
TCTN3-203ENST00000371217 PRDM10Q9NQV6 1147 aa11.65□□□□□ -0.54
TCTN3-203ENST00000371217 NLRP2Q9NX02 1062 aa11.65□□□□□ -0.54
TCTN3-203ENST00000371217 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
TCTN3-203ENST00000371217 PPP4R3BQ5MIZ7 849 aa11.64□□□□□ -0.55
TCTN3-203ENST00000371217 CLIP2Q9UDT6 1046 aa11.64□□□□□ -0.55
TCTN3-203ENST00000371217 A0A087WZG4 1122 aa11.64□□□□□ -0.55
TCTN3-203ENST00000371217 ZSCAN25Q6NSZ9 544 aa11.64□□□□□ -0.55
TCTN3-203ENST00000371217 SMAP1Q8IYB5 467 aaPredicted RBP11.64□□□□□ -0.55
TCTN3-203ENST00000371217 HAUS7Q99871 368 aa11.64□□□□□ -0.55
TCTN3-203ENST00000371217 NAP1L2Q9ULW6 460 aaPredicted RBP11.64□□□□□ -0.55
TCTN3-203ENST00000371217 ZNF609O15014 1411 aa11.64□□□□□ -0.55
TCTN3-203ENST00000371217 GOLGA6L19H0YKK7 550 aa11.63□□□□□ -0.55
TCTN3-203ENST00000371217 KRT28Q7Z3Y7 464 aa11.63□□□□□ -0.55
TCTN3-203ENST00000371217 TTC5Q8N0Z6 440 aa11.63□□□□□ -0.55
TCTN3-203ENST00000371217 C16orf45Q96MC5 204 aaPredicted RBP11.63□□□□□ -0.55
TCTN3-203ENST00000371217 NEUROD6Q96NK8 337 aa11.63□□□□□ -0.55
TCTN3-203ENST00000371217 PPFIA3O75145 1194 aa11.63□□□□□ -0.55
TCTN3-203ENST00000371217 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
TCTN3-203ENST00000371217 CBX1P83916 185 aa11.63□□□□□ -0.55
TCTN3-203ENST00000371217 SLFNL1Q499Z3 407 aa11.63□□□□□ -0.55
TCTN3-203ENST00000371217 STOX1Q6ZVD7 989 aa11.63□□□□□ -0.55
TCTN3-203ENST00000371217 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.63□□□□□ -0.55
TCTN3-203ENST00000371217 CCAR1Q8IX12 1150 aaKnown RBP11.63□□□□□ -0.55
TCTN3-203ENST00000371217 PDCL2Q8N4E4 241 aa11.63□□□□□ -0.55
TCTN3-203ENST00000371217 FTOQ9C0B1 505 aaKnown RBP eCLIP11.63□□□□□ -0.55
TCTN3-203ENST00000371217 PHKG2P15735 406 aa11.62□□□□□ -0.55
TCTN3-203ENST00000371217 TATP17735 454 aaPredicted RBP11.62□□□□□ -0.55
TCTN3-203ENST00000371217 CCT2P78371 535 aaKnown RBP11.62□□□□□ -0.55
TCTN3-203ENST00000371217 APOBRQ0VD83 1088 aa11.62□□□□□ -0.55
TCTN3-203ENST00000371217 DHX32Q7L7V1 743 aaKnown RBP11.62□□□□□ -0.55
TCTN3-203ENST00000371217 ERBB3P21860 1342 aa11.62□□□□□ -0.55
TCTN3-203ENST00000371217 CHD2O14647 1828 aaKnown RBP11.62□□□□□ -0.55
TCTN3-203ENST00000371217 GOLIM4O00461 696 aa11.62□□□□□ -0.55
TCTN3-203ENST00000371217 PFKFB2O60825 505 aa11.62□□□□□ -0.55
TCTN3-203ENST00000371217 HMGB1P09429 215 aaKnown RBP11.62□□□□□ -0.55
TCTN3-203ENST00000371217 RABL6Q3YEC7 729 aaPredicted RBP11.62□□□□□ -0.55
TCTN3-203ENST00000371217 LMBR1LQ6UX01 489 aa11.62□□□□□ -0.55
TCTN3-203ENST00000371217 KBTBD3Q8NAB2 608 aa11.62□□□□□ -0.55
TCTN3-203ENST00000371217 SMARCC2Q8TAQ2 1214 aa11.62□□□□□ -0.55
TCTN3-203ENST00000371217 CACTINQ8WUQ7 758 aaKnown RBP11.62□□□□□ -0.55
TCTN3-203ENST00000371217 LLPHQ9BRT6 129 aaKnown RBP11.62□□□□□ -0.55
TCTN3-203ENST00000371217 PTPDC1A2A3K4 754 aa11.61□□□□□ -0.55
TCTN3-203ENST00000371217 CAVIN2O95810 425 aa11.61□□□□□ -0.55
TCTN3-203ENST00000371217 TNNT1P13805 278 aa11.61□□□□□ -0.55
TCTN3-203ENST00000371217 ADD1P35611 737 aaKnown RBP11.61□□□□□ -0.55
TCTN3-203ENST00000371217 LRP10Q7Z4F1 713 aa11.61□□□□□ -0.55
TCTN3-203ENST00000371217 NSUN7Q8NE18 718 aaKnown RBP11.61□□□□□ -0.55
TCTN3-203ENST00000371217 CTDNEP1O95476 244 aa11.61□□□□□ -0.55
TCTN3-203ENST00000371217 GUCY1B3Q02153 619 aa11.61□□□□□ -0.55
TCTN3-203ENST00000371217 TPD52L1Q16890 204 aaPredicted RBP11.61□□□□□ -0.55
TCTN3-203ENST00000371217 CCDC144BQ3MJ40 725 aa11.61□□□□□ -0.55
TCTN3-203ENST00000371217 NAA16Q6N069 864 aaPredicted RBP11.61□□□□□ -0.55
TCTN3-203ENST00000371217 C11orf57Q6ZUT1 292 aaPredicted RBP11.61□□□□□ -0.55
TCTN3-203ENST00000371217 CCDC144CPQ8IYA2 1237 aa11.61□□□□□ -0.55
TCTN3-203ENST00000371217 NCOA5Q9HCD5 579 aaKnown RBP11.61□□□□□ -0.55
TCTN3-203ENST00000371217 RCOR1Q9UKL0 485 aa11.61□□□□□ -0.55
TCTN3-203ENST00000371217 MRC1P22897 1456 aa11.61□□□□□ -0.55
TCTN3-203ENST00000371217 BECN2A8MW95 431 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 CTIFO43310 598 aaKnown RBP11.6□□□□□ -0.55
TCTN3-203ENST00000371217 TIMM10P62072 90 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 IQCB1Q15051 598 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 ATP2B3Q16720 1220 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 CCDC73Q6ZRK6 1079 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 CHST3Q7LGC8 479 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 IFNL2Q8IZJ0 200 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 GOLPH3LQ9H4A5 285 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 CTAGE5O15320 804 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 CSB-PGBD3P0DP91 1061 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 STX1AQ16623 288 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 FMNL2Q96PY5 1086 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 USP28Q96RU2 1077 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 PAG1Q9NWQ8 432 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 PRDM4Q9UKN5 801 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 KDM6AO15550 1401 aaPredicted RBP11.6□□□□□ -0.55
TCTN3-203ENST00000371217 FER1L4A9Z1Z3 1794 aa11.6□□□□□ -0.55
TCTN3-203ENST00000371217 A0A087WWV3 80 aa11.59□□□□□ -0.55
TCTN3-203ENST00000371217 A0A0G2JLW4 131 aa11.59□□□□□ -0.55
TCTN3-203ENST00000371217 KINO60870 393 aaKnown RBP11.59□□□□□ -0.55
TCTN3-203ENST00000371217 ME1P48163 572 aa11.59□□□□□ -0.55
TCTN3-203ENST00000371217 ANKRD7Q92527 254 aa11.59□□□□□ -0.55
TCTN3-203ENST00000371217 ZNF396Q96N95 335 aaPredicted RBP11.59□□□□□ -0.55
TCTN3-203ENST00000371217 SH3TC1Q8TE82 1336 aa11.59□□□□□ -0.55
TCTN3-203ENST00000371217 RFX7Q2KHR2 1363 aa11.59□□□□□ -0.55
TCTN3-203ENST00000371217 PHRF1Q9P1Y6 1649 aaKnown RBP11.59□□□□□ -0.55
TCTN3-203ENST00000371217 E7EWF7 191 aa11.59□□□□□ -0.55
TCTN3-203ENST00000371217 CDC25BP30305 580 aa11.59□□□□□ -0.55
TCTN3-203ENST00000371217 EXOSC10Q01780 885 aaKnown RBP11.59□□□□□ -0.55
TCTN3-203ENST00000371217 ZNF592Q92610 1267 aa11.59□□□□□ -0.55
TCTN3-203ENST00000371217 FBXW7Q969H0 707 aa11.59□□□□□ -0.55
TCTN3-203ENST00000371217 HELLSQ9NRZ9 838 aa11.59□□□□□ -0.55
TCTN3-203ENST00000371217 SLIT3O75094 1523 aa11.58□□□□□ -0.55
TCTN3-203ENST00000371217 SMTNL1A8MU46 457 aa11.58□□□□□ -0.56
TCTN3-203ENST00000371217 SNW1Q13573 536 aaKnown RBP11.58□□□□□ -0.56
TCTN3-203ENST00000371217 ARID5BQ14865 1188 aa11.58□□□□□ -0.56
TCTN3-203ENST00000371217 LRRC8AQ8IWT6 810 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms