RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 EHBP1Q8NDI1 1231 aa25.28■■□□□ 1.64
TM9SF3-201ENST00000371142 TTC16Q8NEE8 873 aa25.28■■□□□ 1.64
TM9SF3-201ENST00000371142 ZCRB1Q8TBF4 217 aaKnown RBP25.28■■□□□ 1.64
TM9SF3-201ENST00000371142 SBNO2Q9Y2G9 1366 aa25.28■■□□□ 1.64
TM9SF3-201ENST00000371142 SLC9C2Q5TAH2 1124 aa25.28■■□□□ 1.64
TM9SF3-201ENST00000371142 ZFP91Q96JP5 570 aaPredicted RBP25.28■■□□□ 1.64
TM9SF3-201ENST00000371142 HSF2BPO75031 334 aa25.27■■□□□ 1.64
TM9SF3-201ENST00000371142 ACTN2P35609 894 aa25.27■■□□□ 1.64
TM9SF3-201ENST00000371142 NAA16Q6N069 864 aaPredicted RBP25.27■■□□□ 1.64
TM9SF3-201ENST00000371142 CEP112Q8N8E3 955 aa25.27■■□□□ 1.64
TM9SF3-201ENST00000371142 PA2G4Q9UQ80 394 aaKnown RBP25.27■■□□□ 1.64
TM9SF3-201ENST00000371142 GRM8O00222 908 aa25.27■■□□□ 1.64
TM9SF3-201ENST00000371142 SETDB2Q96T68 719 aa25.27■■□□□ 1.64
TM9SF3-201ENST00000371142 AOPEPQ8N6M6 819 aa25.27■■□□□ 1.64
TM9SF3-201ENST00000371142 MRPS27Q92552 414 aaKnown RBP25.27■■□□□ 1.64
TM9SF3-201ENST00000371142 CAVIN2O95810 425 aa25.27■■□□□ 1.64
TM9SF3-201ENST00000371142 PTGS1P23219 599 aa25.27■■□□□ 1.64
TM9SF3-201ENST00000371142 PCDHB15Q9Y5E8 787 aa25.26■■□□□ 1.64
TM9SF3-201ENST00000371142 NAPAP54920 295 aa25.26■■□□□ 1.63
TM9SF3-201ENST00000371142 NMIQ13287 307 aaPredicted RBP25.26■■□□□ 1.63
TM9SF3-201ENST00000371142 GIGYF2Q6Y7W6 1299 aaKnown RBP25.26■■□□□ 1.63
TM9SF3-201ENST00000371142 C8orf58Q8NAV2 365 aa25.26■■□□□ 1.63
TM9SF3-201ENST00000371142 CTAGE1Q96RT6 745 aa25.26■■□□□ 1.63
TM9SF3-201ENST00000371142 PAXBP1Q9Y5B6 917 aa25.26■■□□□ 1.63
TM9SF3-201ENST00000371142 CCDC172P0C7W6 258 aa25.26■■□□□ 1.63
TM9SF3-201ENST00000371142 TMTC2Q8N394 836 aa25.26■■□□□ 1.63
TM9SF3-201ENST00000371142 IKBKGQ9Y6K9 419 aa25.26■■□□□ 1.63
TM9SF3-201ENST00000371142 ARHGAP45Q92619 1136 aa25.25■■□□□ 1.63
TM9SF3-201ENST00000371142 ASIC1P78348 528 aa25.25■■□□□ 1.63
TM9SF3-201ENST00000371142 MRPL50Q8N5N7 158 aaKnown RBP25.25■■□□□ 1.63
TM9SF3-201ENST00000371142 CALCOCO1Q9P1Z2 691 aa25.25■■□□□ 1.63
TM9SF3-201ENST00000371142 DNM1Q05193 864 aaKnown RBP25.25■■□□□ 1.63
TM9SF3-201ENST00000371142 DHX58Q96C10 678 aa25.25■■□□□ 1.63
TM9SF3-201ENST00000371142 FERMT1Q9BQL6 677 aa25.25■■□□□ 1.63
TM9SF3-201ENST00000371142 DNAJC25Q9H1X3 360 aa25.25■■□□□ 1.63
TM9SF3-201ENST00000371142 CYLC1P35663 651 aaPredicted RBP25.25■■□□□ 1.63
TM9SF3-201ENST00000371142 CHST3Q7LGC8 479 aa25.25■■□□□ 1.63
TM9SF3-201ENST00000371142 CCDC171Q6TFL3 1326 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 MPHOSPH6Q99547 160 aaKnown RBP25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 TSNARE1Q96NA8 513 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 DACT1Q9NYF0 836 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 PHACTR2O75167 634 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 ATP2C2O75185 946 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 SKILP12757 684 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 SPECC1LQ69YQ0 1117 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 PPP1R14CQ8TAE6 165 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 MRVI1Q9Y6F6 885 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 BMP15O95972 392 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 CALM1P0DP23 149 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 CALM2P0DP24 149 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 CALM3P0DP25 149 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 KRT13P13646 458 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 ATP8B2P98198 1209 aa25.24■■□□□ 1.63
TM9SF3-201ENST00000371142 BMS1Q14692 1282 aaKnown RBP25.23■■□□□ 1.63
TM9SF3-201ENST00000371142 ZGPATQ8N5A5 531 aaKnown RBP25.23■■□□□ 1.63
TM9SF3-201ENST00000371142 ANKRD44Q8N8A2 993 aa25.23■■□□□ 1.63
TM9SF3-201ENST00000371142 PAG1Q9NWQ8 432 aa25.23■■□□□ 1.63
TM9SF3-201ENST00000371142 DNAI1Q9UI46 699 aa25.23■■□□□ 1.63
TM9SF3-201ENST00000371142 NIP7Q9Y221 180 aaKnown RBP eCLIP25.23■■□□□ 1.63
TM9SF3-201ENST00000371142 A0A1W2PRG0 241 aa25.23■■□□□ 1.63
TM9SF3-201ENST00000371142 MAGEB6P1A0A0J9YX57 407 aa25.23■■□□□ 1.63
TM9SF3-201ENST00000371142 CKAP4Q07065 602 aaKnown RBP25.23■■□□□ 1.63
TM9SF3-201ENST00000371142 CCDC186Q7Z3E2 898 aa25.23■■□□□ 1.63
TM9SF3-201ENST00000371142 SERPINA10Q9UK55 444 aa25.23■■□□□ 1.63
TM9SF3-201ENST00000371142 RPRD2Q5VT52 1461 aaKnown RBP25.22■■□□□ 1.63
TM9SF3-201ENST00000371142 F13A1P00488 732 aa25.22■■□□□ 1.63
TM9SF3-201ENST00000371142 ARID5AQ03989 594 aa25.22■■□□□ 1.63
TM9SF3-201ENST00000371142 KSR2Q6VAB6 950 aa25.22■■□□□ 1.63
TM9SF3-201ENST00000371142 SMARCC2Q8TAQ2 1214 aa25.22■■□□□ 1.63
TM9SF3-201ENST00000371142 IL15P40933 162 aaPredicted RBP25.22■■□□□ 1.63
TM9SF3-201ENST00000371142 BBXQ8WY36 941 aaPredicted RBP25.21■■□□□ 1.63
TM9SF3-201ENST00000371142 GJC1P36383 396 aa25.21■■□□□ 1.63
TM9SF3-201ENST00000371142 NLRP3Q96P20 1036 aa25.21■■□□□ 1.63
TM9SF3-201ENST00000371142 HMGXB3Q12766 1538 aa25.21■■□□□ 1.63
TM9SF3-201ENST00000371142 RALGAPBQ86X10 1494 aa25.21■■□□□ 1.63
TM9SF3-201ENST00000371142 CCDC155Q8N6L0 562 aa25.21■■□□□ 1.63
TM9SF3-201ENST00000371142 CA8P35219 290 aa25.2■■□□□ 1.63
TM9SF3-201ENST00000371142 ZNF354CQ86Y25 554 aa25.2■■□□□ 1.63
TM9SF3-201ENST00000371142 PAIP2Q9BPZ3 127 aaKnown RBP25.2■■□□□ 1.63
TM9SF3-201ENST00000371142 RTL1A6NKG5 1358 aa25.2■■□□□ 1.63
TM9SF3-201ENST00000371142 TMEM110-MUSTN1A8MSY1 372 aa25.2■■□□□ 1.62
TM9SF3-201ENST00000371142 PPIP5K1Q6PFW1 1433 aa25.2■■□□□ 1.62
TM9SF3-201ENST00000371142 CTAGE15A4D2H0 777 aa25.2■■□□□ 1.62
TM9SF3-201ENST00000371142 PSMA7O14818 248 aa25.2■■□□□ 1.62
TM9SF3-201ENST00000371142 CTAGE8P0CG41 777 aa25.2■■□□□ 1.62
TM9SF3-201ENST00000371142 CTAGE6Q86UF2 777 aa25.2■■□□□ 1.62
TM9SF3-201ENST00000371142 CTAGE4Q8IX94 777 aa25.2■■□□□ 1.62
TM9SF3-201ENST00000371142 FANCAO15360 1455 aa25.2■■□□□ 1.62
TM9SF3-201ENST00000371142 ALDH1L1O75891 902 aa25.2■■□□□ 1.62
TM9SF3-201ENST00000371142 TERF1P54274 439 aa25.2■■□□□ 1.62
TM9SF3-201ENST00000371142 CADPS2Q86UW7 1296 aa25.2■■□□□ 1.62
TM9SF3-201ENST00000371142 FERP16591 822 aa25.19■■□□□ 1.62
TM9SF3-201ENST00000371142 GNAQP50148 359 aa25.19■■□□□ 1.62
TM9SF3-201ENST00000371142 UTP14AQ9BVJ6 771 aaKnown RBP25.19■■□□□ 1.62
TM9SF3-201ENST00000371142 DENND4BO75064 1496 aaPredicted RBP25.19■■□□□ 1.62
TM9SF3-201ENST00000371142 ABCA10Q8WWZ4 1543 aa25.19■■□□□ 1.62
TM9SF3-201ENST00000371142 AKAP4Q5JQC9 854 aa25.19■■□□□ 1.62
TM9SF3-201ENST00000371142 MIGA1Q8NAN2 632 aa25.19■■□□□ 1.62
TM9SF3-201ENST00000371142 PABPN1LA6NDY0 278 aaKnown RBP25.19■■□□□ 1.62
TM9SF3-201ENST00000371142 FAM200AQ8TCP9 573 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms