RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 RTEL1-TNFRSF6BF6WH68 1400 aa12.61□□□□□ -0.39
COL11A1-203ENST00000370096 FGD6Q6ZV73 1430 aa12.61□□□□□ -0.39
COL11A1-203ENST00000370096 ANKRD50Q9ULJ7 1429 aa12.61□□□□□ -0.39
COL11A1-203ENST00000370096 TCEANC2Q96MN5 208 aa12.61□□□□□ -0.39
COL11A1-203ENST00000370096 PCK1P35558 622 aa12.61□□□□□ -0.39
COL11A1-203ENST00000370096 STX17P56962 302 aa12.61□□□□□ -0.39
COL11A1-203ENST00000370096 ATP11AP98196 1134 aa12.61□□□□□ -0.39
COL11A1-203ENST00000370096 PLS1Q14651 629 aa12.61□□□□□ -0.39
COL11A1-203ENST00000370096 HEATR3Q7Z4Q2 680 aa12.61□□□□□ -0.39
COL11A1-203ENST00000370096 CCDC94Q9BW85 323 aaPredicted RBP12.61□□□□□ -0.39
COL11A1-203ENST00000370096 CIB2O75838 187 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 LMOD1P29536 600 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-203ENST00000370096 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 UBXN1Q04323 297 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 SETDB1Q15047 1291 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 DHX58Q96C10 678 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 LACTBP83111 547 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-203ENST00000370096 SATB1Q01826 763 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 TXNDC16Q9P2K2 825 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 RPGRQ92834 1020 aaKnown RBP12.6□□□□□ -0.39
COL11A1-203ENST00000370096 PFDN4Q9NQP4 134 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 PRDM11Q9NQV5 511 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 ZNF652Q9Y2D9 606 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 RARSP54136 660 aaKnown RBP12.6□□□□□ -0.39
COL11A1-203ENST00000370096 INTS8Q75QN2 995 aaKnown RBP12.6□□□□□ -0.39
COL11A1-203ENST00000370096 CCDC170Q8IYT3 715 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 GBP7Q8N8V2 638 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-203ENST00000370096 FAM76AQ8TAV0 307 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-203ENST00000370096 MKRN1Q9UHC7 482 aaKnown RBP12.6□□□□□ -0.39
COL11A1-203ENST00000370096 UTP14AQ9BVJ6 771 aaKnown RBP12.6□□□□□ -0.39
COL11A1-203ENST00000370096 BUB1BO60566 1050 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-203ENST00000370096 RNASE9P60153 205 aaKnown RBP12.6□□□□□ -0.39
COL11A1-203ENST00000370096 GEN1Q17RS7 908 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 MPRIPQ6WCQ1 1025 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 TMOD3Q9NYL9 352 aa12.6□□□□□ -0.39
COL11A1-203ENST00000370096 VGLL3A8MV65 326 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 ATP2A1O14983 1001 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 GTPBP4Q9BZE4 634 aaKnown RBP12.59□□□□□ -0.39
COL11A1-203ENST00000370096 CUX1P39880 1505 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 FCHSD2O94868 740 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 NCOA7Q8NI08 942 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 NSD3Q9BZ95 1437 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 KIF5AQ12840 1032 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 KLHL40Q2TBA0 621 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 ALG1Q9BT22 464 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 KLF18A0A0U1RQI7 1052 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 ASIC1P78348 528 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 TMX3Q96JJ7 454 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 PLIN2Q99541 437 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 RASSF4Q9H2L5 321 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 FAM169AQ9Y6X4 670 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 RASA3Q14644 834 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 PPP1R21Q6ZMI0 780 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 CALM1P0DP23 149 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 CALM2P0DP24 149 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 CALM3P0DP25 149 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 NBPF8Q3BBV2 869 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 MAP3K2Q9Y2U5 619 aa12.59□□□□□ -0.39
COL11A1-203ENST00000370096 CLNS1AP54105 237 aaKnown RBP12.58□□□□□ -0.4
COL11A1-203ENST00000370096 U2AF2P26368 475 aaKnown RBP eCLIP12.58□□□□□ -0.4
COL11A1-203ENST00000370096 SARNPP82979 210 aaKnown RBP12.58□□□□□ -0.4
COL11A1-203ENST00000370096 DNM1Q05193 864 aaKnown RBP12.58□□□□□ -0.4
COL11A1-203ENST00000370096 PPFIBP2Q8ND30 876 aa12.58□□□□□ -0.4
COL11A1-203ENST00000370096 C6orf229H3BNL8 230 aa12.58□□□□□ -0.4
COL11A1-203ENST00000370096 GMNNO75496 209 aa12.58□□□□□ -0.4
COL11A1-203ENST00000370096 CRCPO75575 148 aa12.58□□□□□ -0.4
COL11A1-203ENST00000370096 FAM13AO94988 1023 aa12.58□□□□□ -0.4
COL11A1-203ENST00000370096 PROCA1Q8NCQ7 364 aaPredicted RBP12.58□□□□□ -0.4
COL11A1-203ENST00000370096 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.58□□□□□ -0.4
COL11A1-203ENST00000370096 DACT1Q9NYF0 836 aa12.58□□□□□ -0.4
COL11A1-203ENST00000370096 PDE4BQ07343 736 aa12.58□□□□□ -0.4
COL11A1-203ENST00000370096 GKAP1Q5VSY0 366 aaPredicted RBP12.58□□□□□ -0.4
COL11A1-203ENST00000370096 PYM1Q9BRP8 204 aaKnown RBP12.58□□□□□ -0.4
COL11A1-203ENST00000370096 XRCC6P12956 609 aaKnown RBP eCLIP12.58□□□□□ -0.4
COL11A1-203ENST00000370096 HSPA1LP34931 641 aa12.58□□□□□ -0.4
COL11A1-203ENST00000370096 SNX16P57768 344 aa12.58□□□□□ -0.4
COL11A1-203ENST00000370096 ATP5J2-PTCD1G3V325 749 aa12.57□□□□□ -0.4
COL11A1-203ENST00000370096 PRIM1P49642 420 aaKnown RBP12.57□□□□□ -0.4
COL11A1-203ENST00000370096 LRRC27Q9C0I9 530 aa12.57□□□□□ -0.4
COL11A1-203ENST00000370096 ZSCAN16Q9H4T2 348 aaPredicted RBP12.57□□□□□ -0.4
COL11A1-203ENST00000370096 STX8Q9UNK0 236 aa12.57□□□□□ -0.4
COL11A1-203ENST00000370096 IFIT1BQ5T764 474 aaKnown RBP12.57□□□□□ -0.4
COL11A1-203ENST00000370096 ZBTB3Q9H5J0 574 aa12.57□□□□□ -0.4
COL11A1-203ENST00000370096 KRT86O43790 486 aa12.57□□□□□ -0.4
COL11A1-203ENST00000370096 VPS52Q8N1B4 723 aa12.57□□□□□ -0.4
COL11A1-203ENST00000370096 ZBTB21Q9ULJ3 1066 aa12.57□□□□□ -0.4
COL11A1-203ENST00000370096 NKTRP30414 1462 aaKnown RBP12.57□□□□□ -0.4
COL11A1-203ENST00000370096 A0A1B0GUL7 405 aa12.57□□□□□ -0.4
COL11A1-203ENST00000370096 ZNF131P52739 623 aa12.57□□□□□ -0.4
COL11A1-203ENST00000370096 WTAPQ15007 396 aa12.57□□□□□ -0.4
COL11A1-203ENST00000370096 NEDD9Q14511 834 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 ATP2B3Q16720 1220 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 BRF1Q92994 677 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 MAK16Q9BXY0 300 aaKnown RBP12.56□□□□□ -0.4
COL11A1-203ENST00000370096 IFNKQ9P0W0 207 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 Q6ZUG5 572 aa12.56□□□□□ -0.4
COL11A1-203ENST00000370096 ARHGEF2Q92974 986 aaKnown RBP12.56□□□□□ -0.4
COL11A1-203ENST00000370096 TXNDC9O14530 226 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms