RNA–Protein interactions for RNA: ENST00000369518.1

SYCP1-201, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYCP1, Length 3,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-201ENST00000369518 WDR33Q9C0J8 1336 aaKnown RBP7.23□□□□□ -1.25
SYCP1-201ENST00000369518 KIF4AO95239 1232 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 MCCP23508 829 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 PRKAR2BP31323 418 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 TRIM28Q13263 835 aaKnown RBP7.23□□□□□ -1.25
SYCP1-201ENST00000369518 TNIP1Q15025 636 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 NFE2L2Q16236 605 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 JDP2Q8WYK2 163 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 CFHR5Q9BXR6 569 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 NBPF26B4DH59 902 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 HMOX1P09601 288 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 TNNT2P45379 298 aaPredicted RBP7.23□□□□□ -1.25
SYCP1-201ENST00000369518 EIF4A1P60842 406 aaKnown RBP7.23□□□□□ -1.25
SYCP1-201ENST00000369518 FKBP1BP68106 108 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 NBPF10Q6P3W6 841 aaKnown RBP7.23□□□□□ -1.25
SYCP1-201ENST00000369518 LRP10Q7Z4F1 713 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 NBPF15Q8N660 670 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 PITPNM2Q9BZ72 1349 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 ZNF541Q9H0D2 1346 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 RTL9Q8NET4 1388 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 ABCC12Q96J65 1359 aa7.23□□□□□ -1.25
SYCP1-201ENST00000369518 ARID4AP29374 1257 aaPredicted RBP7.22□□□□□ -1.25
SYCP1-201ENST00000369518 DDX21Q9NR30 783 aaKnown RBP eCLIP7.22□□□□□ -1.25
SYCP1-201ENST00000369518 FOXN1O15353 648 aa7.22□□□□□ -1.25
SYCP1-201ENST00000369518 NIP7Q9Y221 180 aaKnown RBP eCLIP7.22□□□□□ -1.25
SYCP1-201ENST00000369518 PPEF1O14829 653 aaPredicted RBP7.22□□□□□ -1.25
SYCP1-201ENST00000369518 A1BGP04217 495 aa7.22□□□□□ -1.25
SYCP1-201ENST00000369518 CAPN2P17655 700 aa7.22□□□□□ -1.25
SYCP1-201ENST00000369518 VEGFBP49765 207 aa7.22□□□□□ -1.25
SYCP1-201ENST00000369518 DNAJC14Q6Y2X3 702 aaPredicted RBP7.22□□□□□ -1.25
SYCP1-201ENST00000369518 RRP9O43818 475 aaKnown RBP7.21□□□□□ -1.25
SYCP1-201ENST00000369518 DDNO94850 711 aaPredicted RBP7.21□□□□□ -1.25
SYCP1-201ENST00000369518 KIAA2012Q0VF49 1180 aa7.21□□□□□ -1.25
SYCP1-201ENST00000369518 EXOC8Q8IYI6 725 aa7.21□□□□□ -1.25
SYCP1-201ENST00000369518 CNTROBQ8N137 903 aa7.21□□□□□ -1.25
SYCP1-201ENST00000369518 ZNRF3Q9ULT6 936 aa7.21□□□□□ -1.25
SYCP1-201ENST00000369518 RALBP1Q15311 655 aa7.21□□□□□ -1.26
SYCP1-201ENST00000369518 NIM1KQ8IY84 436 aa7.21□□□□□ -1.26
SYCP1-201ENST00000369518 RPGRQ92834 1020 aaKnown RBP7.21□□□□□ -1.26
SYCP1-201ENST00000369518 GPRC5DQ9NZD1 345 aa7.21□□□□□ -1.26
SYCP1-201ENST00000369518 TBC1D2BQ9UPU7 963 aa7.21□□□□□ -1.26
SYCP1-201ENST00000369518 USP16Q9Y5T5 823 aa7.21□□□□□ -1.26
SYCP1-201ENST00000369518 SF3B3Q15393 1217 aaKnown RBP7.21□□□□□ -1.26
SYCP1-201ENST00000369518 RBM19Q9Y4C8 960 aaKnown RBP7.2□□□□□ -1.26
SYCP1-201ENST00000369518 CLGNO14967 610 aa7.2□□□□□ -1.26
SYCP1-201ENST00000369518 PAX3P23760 479 aa7.2□□□□□ -1.26
SYCP1-201ENST00000369518 SCNN1DP51172 638 aa7.2□□□□□ -1.26
SYCP1-201ENST00000369518 SPRYD3Q8NCJ5 442 aa7.2□□□□□ -1.26
SYCP1-201ENST00000369518 PHACTR3Q96KR7 559 aa7.2□□□□□ -1.26
SYCP1-201ENST00000369518 DHX16O60231 1041 aaKnown RBP7.2□□□□□ -1.26
SYCP1-201ENST00000369518 PKN2Q16513 984 aaKnown RBP7.2□□□□□ -1.26
SYCP1-201ENST00000369518 GET4Q7L5D6 327 aaPredicted RBP7.2□□□□□ -1.26
SYCP1-201ENST00000369518 NLRP3Q96P20 1036 aa7.2□□□□□ -1.26
SYCP1-201ENST00000369518 UTP14AQ9BVJ6 771 aaKnown RBP7.2□□□□□ -1.26
SYCP1-201ENST00000369518 RIPOR2Q9Y4F9 1068 aa7.2□□□□□ -1.26
SYCP1-201ENST00000369518 MAP4K4O95819 1239 aaPredicted RBP7.19□□□□□ -1.26
SYCP1-201ENST00000369518 GRAPQ13588 217 aa7.19□□□□□ -1.26
SYCP1-201ENST00000369518 GRAPLQ8TC17 118 aaPredicted RBP7.19□□□□□ -1.26
SYCP1-201ENST00000369518 PRDM4Q9UKN5 801 aa7.19□□□□□ -1.26
SYCP1-201ENST00000369518 NOGQ13253 232 aa7.19□□□□□ -1.26
SYCP1-201ENST00000369518 CCDC102AQ96A19 550 aa7.19□□□□□ -1.26
SYCP1-201ENST00000369518 EYA3Q99504 573 aa7.19□□□□□ -1.26
SYCP1-201ENST00000369518 UBN2Q6ZU65 1347 aa7.18□□□□□ -1.26
SYCP1-201ENST00000369518 U2SURPO15042 1029 aaKnown RBP7.18□□□□□ -1.26
SYCP1-201ENST00000369518 RETREG2Q8NC44 543 aa7.18□□□□□ -1.26
SYCP1-201ENST00000369518 ABHD8Q96I13 439 aa7.18□□□□□ -1.26
SYCP1-201ENST00000369518 CIAPIN1Q6FI81 312 aa7.18□□□□□ -1.26
SYCP1-201ENST00000369518 CDC37L1Q7L3B6 337 aa7.18□□□□□ -1.26
SYCP1-201ENST00000369518 IFNLR1Q8IU57 520 aaPredicted RBP7.18□□□□□ -1.26
SYCP1-201ENST00000369518 CAPNS2Q96L46 248 aa7.18□□□□□ -1.26
SYCP1-201ENST00000369518 GABBR1Q9UBS5 961 aa7.18□□□□□ -1.26
SYCP1-201ENST00000369518 ABCC4O15439 1325 aa7.18□□□□□ -1.26
SYCP1-201ENST00000369518 CCER2I3L3R5 266 aa7.18□□□□□ -1.26
SYCP1-201ENST00000369518 CAPN15O75808 1086 aa7.18□□□□□ -1.26
SYCP1-201ENST00000369518 ISCA1Q9BUE6 129 aa7.18□□□□□ -1.26
SYCP1-201ENST00000369518 NPHP1O15259 732 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 CALD1Q05682 793 aaKnown RBP7.17□□□□□ -1.26
SYCP1-201ENST00000369518 TCIRG1Q13488 830 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 PDIA6Q15084 440 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 HSP90AB4PQ58FF6 505 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 CC2D1BQ5T0F9 858 aaKnown RBP7.17□□□□□ -1.26
SYCP1-201ENST00000369518 BICDL1Q6ZP65 573 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 TMEM51Q9NW97 253 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 MYO3BQ8WXR4 1341 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 ZNF280AP59817 542 aaPredicted RBP7.17□□□□□ -1.26
SYCP1-201ENST00000369518 DNTTIP2Q5QJE6 756 aaKnown RBP7.17□□□□□ -1.26
SYCP1-201ENST00000369518 AGBL3Q8NEM8 1001 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 BEGAINQ9BUH8 593 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 ZNF277Q9NRM2 450 aaPredicted RBP7.17□□□□□ -1.26
SYCP1-201ENST00000369518 SPEF2Q9C093 1822 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 KCNQ3O43525 872 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 U2AF1L5P0DN76 240 aaPredicted RBP7.17□□□□□ -1.26
SYCP1-201ENST00000369518 U2AF1Q01081 240 aaKnown RBP eCLIP7.17□□□□□ -1.26
SYCP1-201ENST00000369518 HLFQ16534 295 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 SUSD4Q5VX71 490 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 SPTY2D1Q68D10 685 aaPredicted RBP7.17□□□□□ -1.26
SYCP1-201ENST00000369518 LARGE2Q8N3Y3 721 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 PLBD2Q8NHP8 589 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 KLHL42Q9P2K6 505 aa7.17□□□□□ -1.26
SYCP1-201ENST00000369518 SCN9AQ15858 1988 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms