RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 NOL7Q9UMY1 257 aaKnown RBP13.65□□□□□ -0.22
RAB39B-201ENST00000369454 ALS2Q96Q42 1657 aa13.65□□□□□ -0.23
RAB39B-201ENST00000369454 TMEM87AQ8NBN3 555 aa13.64□□□□□ -0.23
RAB39B-201ENST00000369454 TMOD3Q9NYL9 352 aa13.64□□□□□ -0.23
RAB39B-201ENST00000369454 SLAIN2Q9P270 581 aa13.64□□□□□ -0.23
RAB39B-201ENST00000369454 FAM177BA6PVY3 158 aa13.64□□□□□ -0.23
RAB39B-201ENST00000369454 ADCY5O95622 1261 aa13.64□□□□□ -0.23
RAB39B-201ENST00000369454 C17orf53Q8N3J3 647 aaPredicted RBP13.64□□□□□ -0.23
RAB39B-201ENST00000369454 SPATA32Q96LK8 384 aa13.64□□□□□ -0.23
RAB39B-201ENST00000369454 HMG20BQ9P0W2 317 aa13.64□□□□□ -0.23
RAB39B-201ENST00000369454 EYA2O00167 538 aa13.64□□□□□ -0.23
RAB39B-201ENST00000369454 TTC12Q9H892 705 aaPredicted RBP13.64□□□□□ -0.23
RAB39B-201ENST00000369454 CEP126Q9P2H0 1117 aa13.64□□□□□ -0.23
RAB39B-201ENST00000369454 ZKSCAN5Q9Y2L8 839 aa13.64□□□□□ -0.23
RAB39B-201ENST00000369454 ZNF335Q9H4Z2 1342 aaPredicted RBP13.63□□□□□ -0.23
RAB39B-201ENST00000369454 PDCP20941 246 aa13.63□□□□□ -0.23
RAB39B-201ENST00000369454 SPC24Q8NBT2 197 aa13.63□□□□□ -0.23
RAB39B-201ENST00000369454 BICD2Q8TD16 824 aa13.63□□□□□ -0.23
RAB39B-201ENST00000369454 CCDC39Q9UFE4 941 aa13.63□□□□□ -0.23
RAB39B-201ENST00000369454 U3KPZ7 1027 aaPredicted RBP13.63□□□□□ -0.23
RAB39B-201ENST00000369454 KIF1AQ12756 1690 aa13.63□□□□□ -0.23
RAB39B-201ENST00000369454 CSPP1Q1MSJ5 1256 aa13.63□□□□□ -0.23
RAB39B-201ENST00000369454 FTOQ9C0B1 505 aaKnown RBP eCLIP13.63□□□□□ -0.23
RAB39B-201ENST00000369454 GPHNQ9NQX3 736 aaPredicted RBP13.63□□□□□ -0.23
RAB39B-201ENST00000369454 KDM4AO75164 1064 aa13.63□□□□□ -0.23
RAB39B-201ENST00000369454 IL15P40933 162 aaPredicted RBP13.63□□□□□ -0.23
RAB39B-201ENST00000369454 DACT1Q9NYF0 836 aa13.63□□□□□ -0.23
RAB39B-201ENST00000369454 SCRN1Q12765 414 aa13.62□□□□□ -0.23
RAB39B-201ENST00000369454 KRT32Q14532 448 aa13.62□□□□□ -0.23
RAB39B-201ENST00000369454 DNTTIP2Q5QJE6 756 aaKnown RBP13.62□□□□□ -0.23
RAB39B-201ENST00000369454 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
RAB39B-201ENST00000369454 CRYBG1Q9Y4K1 1723 aa13.62□□□□□ -0.23
RAB39B-201ENST00000369454 TTC39AQ5SRH9 613 aa13.62□□□□□ -0.23
RAB39B-201ENST00000369454 GTF3C6Q969F1 213 aa13.62□□□□□ -0.23
RAB39B-201ENST00000369454 AFDNP55196 1824 aaKnown RBP13.62□□□□□ -0.23
RAB39B-201ENST00000369454 CAMTA1Q9Y6Y1 1673 aa13.62□□□□□ -0.23
RAB39B-201ENST00000369454 SCARF1Q14162 830 aa13.61□□□□□ -0.23
RAB39B-201ENST00000369454 CCDC191Q8NCU4 936 aa13.61□□□□□ -0.23
RAB39B-201ENST00000369454 ERVV-2B6SEH9 535 aa13.61□□□□□ -0.23
RAB39B-201ENST00000369454 HSPD1P10809 573 aaKnown RBP13.61□□□□□ -0.23
RAB39B-201ENST00000369454 M0R2C6 588 aa13.61□□□□□ -0.23
RAB39B-201ENST00000369454 USPL1Q5W0Q7 1092 aa13.61□□□□□ -0.23
RAB39B-201ENST00000369454 STRCP1A6NGW2 1772 aa13.61□□□□□ -0.23
RAB39B-201ENST00000369454 FBXW7Q969H0 707 aa13.6□□□□□ -0.23
RAB39B-201ENST00000369454 NUP62CLQ9H1M0 184 aa13.6□□□□□ -0.23
RAB39B-201ENST00000369454 MAST3O60307 1309 aa13.6□□□□□ -0.23
RAB39B-201ENST00000369454 HLFQ16534 295 aa13.6□□□□□ -0.23
RAB39B-201ENST00000369454 PIGBQ92521 554 aa13.6□□□□□ -0.23
RAB39B-201ENST00000369454 OSBP2Q969R2 916 aa13.6□□□□□ -0.23
RAB39B-201ENST00000369454 ARID3AQ99856 593 aa13.6□□□□□ -0.23
RAB39B-201ENST00000369454 BTG4Q9NY30 223 aa13.6□□□□□ -0.23
RAB39B-201ENST00000369454 RBM10P98175 930 aaKnown RBP13.6□□□□□ -0.23
RAB39B-201ENST00000369454 XAGE2Q96GT9 111 aa13.6□□□□□ -0.23
RAB39B-201ENST00000369454 OFD1O75665 1012 aa13.59□□□□□ -0.23
RAB39B-201ENST00000369454 CCDC158Q5M9N0 1113 aa13.59□□□□□ -0.23
RAB39B-201ENST00000369454 KIF6Q6ZMV9 814 aa13.59□□□□□ -0.23
RAB39B-201ENST00000369454 LEO1Q8WVC0 666 aaPredicted RBP13.59□□□□□ -0.23
RAB39B-201ENST00000369454 TNMDQ9H2S6 317 aa13.59□□□□□ -0.23
RAB39B-201ENST00000369454 COL18A1P39060 1754 aa13.59□□□□□ -0.23
RAB39B-201ENST00000369454 E7EWF7 191 aa13.59□□□□□ -0.23
RAB39B-201ENST00000369454 ZAP70P43403 619 aa13.59□□□□□ -0.23
RAB39B-201ENST00000369454 OTUD7BQ6GQQ9 843 aa13.59□□□□□ -0.23
RAB39B-201ENST00000369454 LUZP1Q86V48 1076 aa13.59□□□□□ -0.23
RAB39B-201ENST00000369454 TBC1D2BQ9UPU7 963 aa13.59□□□□□ -0.23
RAB39B-201ENST00000369454 A0A087WWV3 80 aa13.59□□□□□ -0.23
RAB39B-201ENST00000369454 RNF113AO15541 343 aaKnown RBP13.59□□□□□ -0.23
RAB39B-201ENST00000369454 AP5Z1O43299 807 aa13.59□□□□□ -0.23
RAB39B-201ENST00000369454 NR1I2O75469 434 aa13.59□□□□□ -0.23
RAB39B-201ENST00000369454 TCIRG1Q13488 830 aa13.59□□□□□ -0.23
RAB39B-201ENST00000369454 DHX32Q7L7V1 743 aaKnown RBP13.59□□□□□ -0.23
RAB39B-201ENST00000369454 HELBQ8NG08 1087 aaPredicted RBP13.59□□□□□ -0.23
RAB39B-201ENST00000369454 CPDO75976 1380 aa13.58□□□□□ -0.23
RAB39B-201ENST00000369454 LETM1O95202 739 aaPredicted RBP13.58□□□□□ -0.24
RAB39B-201ENST00000369454 IFIT5Q13325 482 aaKnown RBP13.58□□□□□ -0.24
RAB39B-201ENST00000369454 HS1BP3Q53T59 392 aa13.58□□□□□ -0.24
RAB39B-201ENST00000369454 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.58□□□□□ -0.24
RAB39B-201ENST00000369454 CARD10Q9BWT7 1032 aa13.58□□□□□ -0.24
RAB39B-201ENST00000369454 ADAMTS7Q9UKP4 1686 aa13.58□□□□□ -0.24
RAB39B-201ENST00000369454 PTPDC1A2A3K4 754 aa13.58□□□□□ -0.24
RAB39B-201ENST00000369454 CCDC192P0DO97 292 aa13.58□□□□□ -0.24
RAB39B-201ENST00000369454 MAP3K11Q16584 847 aa13.58□□□□□ -0.24
RAB39B-201ENST00000369454 TSGA10IPQ3SY00 556 aa13.58□□□□□ -0.24
RAB39B-201ENST00000369454 METTL24Q5JXM2 366 aa13.58□□□□□ -0.24
RAB39B-201ENST00000369454 ZMYM1Q5SVZ6 1142 aa13.58□□□□□ -0.24
RAB39B-201ENST00000369454 LDHAL6AQ6ZMR3 332 aa13.58□□□□□ -0.24
RAB39B-201ENST00000369454 ERCC4Q92889 916 aaPredicted RBP13.57□□□□□ -0.24
RAB39B-201ENST00000369454 ARFGEF2Q9Y6D5 1785 aa13.57□□□□□ -0.24
RAB39B-201ENST00000369454 SNAP23O00161 211 aa13.57□□□□□ -0.24
RAB39B-201ENST00000369454 PGBD1Q96JS3 809 aa13.57□□□□□ -0.24
RAB39B-201ENST00000369454 SCAND2PQ9GZW5 306 aaPredicted RBP13.57□□□□□ -0.24
RAB39B-201ENST00000369454 CNNM1Q9NRU3 951 aa13.57□□□□□ -0.24
RAB39B-201ENST00000369454 GREM2Q9H772 168 aa13.57□□□□□ -0.24
RAB39B-201ENST00000369454 APPP05067 770 aa13.56□□□□□ -0.24
RAB39B-201ENST00000369454 PUS7LQ9H0K6 701 aaKnown RBP13.56□□□□□ -0.24
RAB39B-201ENST00000369454 HELLSQ9NRZ9 838 aa13.56□□□□□ -0.24
RAB39B-201ENST00000369454 GJB4Q9NTQ9 266 aa13.56□□□□□ -0.24
RAB39B-201ENST00000369454 SH3TC1Q8TE82 1336 aa13.56□□□□□ -0.24
RAB39B-201ENST00000369454 COL5A2P05997 1499 aaPredicted RBP13.56□□□□□ -0.24
RAB39B-201ENST00000369454 TYRO3Q06418 890 aa13.56□□□□□ -0.24
RAB39B-201ENST00000369454 ANO6Q4KMQ2 910 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms