RNA–Protein interactions for RNA: ENST00000369331.8

CASP7-205, Transcript of caspase 7, humanhuman

TSL 1 (best) BASIC

Gene CASP7, Length 2,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-205ENST00000369331 NDUFB9Q9Y6M9 179 aa12.24□□□□□ -0.45
CASP7-205ENST00000369331 CIAO1O76071 339 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 CTSWP56202 376 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 COL9A3Q14050 684 aaPredicted RBP12.23□□□□□ -0.45
CASP7-205ENST00000369331 SUSD4Q5VX71 490 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 MCTP1Q6DN14 999 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 FBXO3Q9UK99 471 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 C4AP0C0L4 1744 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 DDX60Q8IY21 1712 aaKnown RBP12.23□□□□□ -0.45
CASP7-205ENST00000369331 LRP5O75197 1615 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 GOLGA6L3A6NEY3 463 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 GNPATO15228 680 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 PDE8AO60658 829 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 CASTP20810 708 aaKnown RBP12.23□□□□□ -0.45
CASP7-205ENST00000369331 IL15P40933 162 aaPredicted RBP12.23□□□□□ -0.45
CASP7-205ENST00000369331 CCDC57Q2TAC2 916 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 KLHL40Q2TBA0 621 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 L1TD1Q5T7N2 865 aaKnown RBP12.23□□□□□ -0.45
CASP7-205ENST00000369331 CREB3L3Q68CJ9 461 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 HAUS7Q99871 368 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 UTP14AQ9BVJ6 771 aaKnown RBP12.23□□□□□ -0.45
CASP7-205ENST00000369331 TM6SF1Q9BZW5 370 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 NIP7Q9Y221 180 aaKnown RBP eCLIP12.23□□□□□ -0.45
CASP7-205ENST00000369331 SH3TC1Q8TE82 1336 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 COL24A1Q17RW2 1714 aa12.23□□□□□ -0.45
CASP7-205ENST00000369331 GOLGA6L22H0YM25 854 aa12.22□□□□□ -0.45
CASP7-205ENST00000369331 EYA2O00167 538 aa12.22□□□□□ -0.45
CASP7-205ENST00000369331 CHGBP05060 677 aa12.22□□□□□ -0.45
CASP7-205ENST00000369331 XRCC6P12956 609 aaKnown RBP eCLIP12.22□□□□□ -0.45
CASP7-205ENST00000369331 LRRC24Q50LG9 513 aa12.22□□□□□ -0.45
CASP7-205ENST00000369331 SYNE4Q8N205 404 aa12.22□□□□□ -0.45
CASP7-205ENST00000369331 ZNF594Q96JF6 807 aaPredicted RBP12.22□□□□□ -0.45
CASP7-205ENST00000369331 JAKMIP1Q96N16 626 aaKnown RBP12.22□□□□□ -0.45
CASP7-205ENST00000369331 GPR108Q9NPR9 543 aa12.22□□□□□ -0.45
CASP7-205ENST00000369331 NARFQ9UHQ1 456 aa12.22□□□□□ -0.45
CASP7-205ENST00000369331 RTCBQ9Y3I0 505 aaKnown RBP12.22□□□□□ -0.45
CASP7-205ENST00000369331 LARGE1O95461 756 aa12.22□□□□□ -0.45
CASP7-205ENST00000369331 NTSR2O95665 410 aa12.22□□□□□ -0.45
CASP7-205ENST00000369331 TAF6LQ9Y6J9 622 aa12.22□□□□□ -0.45
CASP7-205ENST00000369331 SLC27A2O14975 620 aa12.21□□□□□ -0.45
CASP7-205ENST00000369331 IFIT5Q13325 482 aaKnown RBP12.21□□□□□ -0.45
CASP7-205ENST00000369331 SLC27A3Q5K4L6 730 aa12.21□□□□□ -0.45
CASP7-205ENST00000369331 GAS2L3Q86XJ1 694 aa12.21□□□□□ -0.45
CASP7-205ENST00000369331 TTLL11Q8NHH1 800 aa12.21□□□□□ -0.45
CASP7-205ENST00000369331 LARP6Q9BRS8 491 aaKnown RBP12.21□□□□□ -0.45
CASP7-205ENST00000369331 PUS3Q9BZE2 481 aaKnown RBP12.21□□□□□ -0.45
CASP7-205ENST00000369331 TAF5LO75529 589 aa12.21□□□□□ -0.46
CASP7-205ENST00000369331 TRIM37O94972 964 aa12.21□□□□□ -0.46
CASP7-205ENST00000369331 HSP90B1P14625 803 aaKnown RBP12.21□□□□□ -0.46
CASP7-205ENST00000369331 VPS53Q5VIR6 699 aa12.21□□□□□ -0.46
CASP7-205ENST00000369331 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.46
CASP7-205ENST00000369331 SPEF2Q9C093 1822 aa12.2□□□□□ -0.46
CASP7-205ENST00000369331 RXRBP28702 533 aa12.2□□□□□ -0.46
CASP7-205ENST00000369331 ST3GAL1Q11201 340 aa12.2□□□□□ -0.46
CASP7-205ENST00000369331 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
CASP7-205ENST00000369331 FOXD4L4Q8WXT5 416 aaPredicted RBP12.2□□□□□ -0.46
CASP7-205ENST00000369331 DNAJC2Q99543 621 aaKnown RBP12.2□□□□□ -0.46
CASP7-205ENST00000369331 LRRC4BQ9NT99 713 aa12.2□□□□□ -0.46
CASP7-205ENST00000369331 ANKRD18BA2A2Z9 1011 aa12.2□□□□□ -0.46
CASP7-205ENST00000369331 TAF7LQ5H9L4 462 aa12.2□□□□□ -0.46
CASP7-205ENST00000369331 USPL1Q5W0Q7 1092 aa12.2□□□□□ -0.46
CASP7-205ENST00000369331 DDX46Q7L014 1031 aaKnown RBP12.2□□□□□ -0.46
CASP7-205ENST00000369331 FBXO41Q8TF61 875 aa12.2□□□□□ -0.46
CASP7-205ENST00000369331 GREM2Q9H772 168 aa12.2□□□□□ -0.46
CASP7-205ENST00000369331 BCL2L12Q9HB09 334 aa12.2□□□□□ -0.46
CASP7-205ENST00000369331 PDRG1Q9NUG6 133 aa12.2□□□□□ -0.46
CASP7-205ENST00000369331 DDX49Q9Y6V7 483 aaKnown RBP12.2□□□□□ -0.46
CASP7-205ENST00000369331 ITGA6P23229 1130 aa12.19□□□□□ -0.46
CASP7-205ENST00000369331 TIMM10P62072 90 aa12.19□□□□□ -0.46
CASP7-205ENST00000369331 CCDC85AQ96PX6 553 aaPredicted RBP12.19□□□□□ -0.46
CASP7-205ENST00000369331 PANK2Q9BZ23 570 aa12.19□□□□□ -0.46
CASP7-205ENST00000369331 CYP46A1Q9Y6A2 500 aa12.19□□□□□ -0.46
CASP7-205ENST00000369331 RTL9Q8NET4 1388 aa12.19□□□□□ -0.46
CASP7-205ENST00000369331 RIC1Q4ADV7 1423 aa12.19□□□□□ -0.46
CASP7-205ENST00000369331 UBR3Q6ZT12 1888 aa12.19□□□□□ -0.46
CASP7-205ENST00000369331 ZPR1O75312 459 aa12.19□□□□□ -0.46
CASP7-205ENST00000369331 ZKSCAN1P17029 563 aaPredicted RBP12.19□□□□□ -0.46
CASP7-205ENST00000369331 KBTBD3Q8NAB2 608 aa12.19□□□□□ -0.46
CASP7-205ENST00000369331 GPT2Q8TD30 523 aa12.19□□□□□ -0.46
CASP7-205ENST00000369331 SEC62Q99442 399 aaKnown RBP12.19□□□□□ -0.46
CASP7-205ENST00000369331 ISY1Q9ULR0 285 aaKnown RBP12.19□□□□□ -0.46
CASP7-205ENST00000369331 FAM177BA6PVY3 158 aa12.18□□□□□ -0.46
CASP7-205ENST00000369331 HMGB2P26583 209 aaKnown RBP12.18□□□□□ -0.46
CASP7-205ENST00000369331 TSGA10IPQ3SY00 556 aa12.18□□□□□ -0.46
CASP7-205ENST00000369331 CCDC129Q6ZRS4 1044 aa12.18□□□□□ -0.46
CASP7-205ENST00000369331 SMIM5Q71RC9 77 aa12.18□□□□□ -0.46
CASP7-205ENST00000369331 AMIGO3Q86WK7 504 aa12.18□□□□□ -0.46
CASP7-205ENST00000369331 ARHGEF1Q92888 912 aaKnown RBP12.18□□□□□ -0.46
CASP7-205ENST00000369331 SRP68Q9UHB9 627 aaKnown RBP12.18□□□□□ -0.46
CASP7-205ENST00000369331 A0A1B0GUL7 405 aa12.18□□□□□ -0.46
CASP7-205ENST00000369331 PRPF40AO75400 957 aaKnown RBP12.18□□□□□ -0.46
CASP7-205ENST00000369331 HCLS1P14317 486 aaPredicted RBP12.18□□□□□ -0.46
CASP7-205ENST00000369331 KCNJ4P48050 445 aa12.18□□□□□ -0.46
CASP7-205ENST00000369331 TBC1D9BQ66K14 1250 aa12.18□□□□□ -0.46
CASP7-205ENST00000369331 NEUROD6Q96NK8 337 aa12.18□□□□□ -0.46
CASP7-205ENST00000369331 GRPEL1Q9HAV7 217 aa12.18□□□□□ -0.46
CASP7-205ENST00000369331 TCHHQ07283 1943 aa12.17□□□□□ -0.46
CASP7-205ENST00000369331 MRE11P49959 708 aa12.17□□□□□ -0.46
CASP7-205ENST00000369331 TRAPPC3LQ5T215 181 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms