RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 TNNI3KQ59H18 835 aa14.8□□□□□ -0.04
LINC01561-201ENST00000369071 CCDC129Q6ZRS4 1044 aa14.8□□□□□ -0.04
LINC01561-201ENST00000369071 RCOR1Q9UKL0 485 aa14.8□□□□□ -0.04
LINC01561-201ENST00000369071 PAXBP1Q9Y5B6 917 aa14.8□□□□□ -0.04
LINC01561-201ENST00000369071 FPGT-TNNI3KV9GXZ4 949 aa14.8□□□□□ -0.04
LINC01561-201ENST00000369071 PFKFB2O60825 505 aa14.79□□□□□ -0.04
LINC01561-201ENST00000369071 CHGBP05060 677 aa14.79□□□□□ -0.04
LINC01561-201ENST00000369071 C11orf57Q6ZUT1 292 aaPredicted RBP14.79□□□□□ -0.04
LINC01561-201ENST00000369071 MRFAP1L1Q96HT8 127 aa14.79□□□□□ -0.04
LINC01561-201ENST00000369071 LLPHQ9BRT6 129 aaKnown RBP14.79□□□□□ -0.04
LINC01561-201ENST00000369071 HSP90B1P14625 803 aaKnown RBP14.78□□□□□ -0.04
LINC01561-201ENST00000369071 PTPN12Q05209 780 aaKnown RBP14.78□□□□□ -0.04
LINC01561-201ENST00000369071 NEXNQ0ZGT2 675 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 TFCP2Q12800 502 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 NAA16Q6N069 864 aaPredicted RBP14.78□□□□□ -0.04
LINC01561-201ENST00000369071 LRRC8AQ8IWT6 810 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 ANKRD24Q8TF21 1146 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 SEC62Q99442 399 aaKnown RBP14.78□□□□□ -0.04
LINC01561-201ENST00000369071 FEZ1Q99689 392 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 METTL22Q9BUU2 404 aaPredicted RBP14.78□□□□□ -0.04
LINC01561-201ENST00000369071 C5P01031 1676 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 CTAGE5O15320 804 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 GCP02774 474 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 RBM6P78332 1123 aaKnown RBP14.78□□□□□ -0.04
LINC01561-201ENST00000369071 STX1AQ16623 288 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 TPD52L1Q16890 204 aaPredicted RBP14.78□□□□□ -0.04
LINC01561-201ENST00000369071 MCMDC2Q4G0Z9 681 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 STOX1Q6ZVD7 989 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 NSUN7Q8NE18 718 aaKnown RBP14.78□□□□□ -0.04
LINC01561-201ENST00000369071 MYD88Q99836 296 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 GOLPH3LQ9H4A5 285 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 ZHX1Q9UKY1 873 aaPredicted RBP14.78□□□□□ -0.04
LINC01561-201ENST00000369071 NDUFB9Q9Y6M9 179 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 MYH15Q9Y2K3 1946 aa14.78□□□□□ -0.04
LINC01561-201ENST00000369071 SNW1Q13573 536 aaKnown RBP14.77□□□□□ -0.04
LINC01561-201ENST00000369071 CCAR1Q8IX12 1150 aaKnown RBP14.77□□□□□ -0.04
LINC01561-201ENST00000369071 XAGE3Q8WTP9 111 aa14.77□□□□□ -0.04
LINC01561-201ENST00000369071 HAUS7Q99871 368 aa14.77□□□□□ -0.04
LINC01561-201ENST00000369071 SLIT3O75094 1523 aa14.77□□□□□ -0.04
LINC01561-201ENST00000369071 GOLGA6L19H0YKK7 550 aa14.77□□□□□ -0.05
LINC01561-201ENST00000369071 NEMFO60524 1076 aa14.77□□□□□ -0.05
LINC01561-201ENST00000369071 CTDNEP1O95476 244 aa14.77□□□□□ -0.05
LINC01561-201ENST00000369071 LRRC2Q9BYS8 371 aa14.77□□□□□ -0.05
LINC01561-201ENST00000369071 MYL6BP14649 208 aa14.76□□□□□ -0.05
LINC01561-201ENST00000369071 CEBPZQ03701 1054 aaKnown RBP14.76□□□□□ -0.05
LINC01561-201ENST00000369071 RABL6Q3YEC7 729 aaPredicted RBP14.76□□□□□ -0.05
LINC01561-201ENST00000369071 ESCO1Q5FWF5 840 aa14.76□□□□□ -0.05
LINC01561-201ENST00000369071 ZNF790Q6PG37 636 aa14.76□□□□□ -0.05
LINC01561-201ENST00000369071 COPS6Q7L5N1 327 aa14.76□□□□□ -0.05
LINC01561-201ENST00000369071 CCDC112Q8NEF3 446 aa14.76□□□□□ -0.05
LINC01561-201ENST00000369071 ENGASEQ8NFI3 743 aa14.76□□□□□ -0.05
LINC01561-201ENST00000369071 FTOQ9C0B1 505 aaKnown RBP eCLIP14.76□□□□□ -0.05
LINC01561-201ENST00000369071 CTNNA3Q9UI47 895 aa14.76□□□□□ -0.05
LINC01561-201ENST00000369071 SLC39A6Q13433 755 aa14.75□□□□□ -0.05
LINC01561-201ENST00000369071 ARID5BQ14865 1188 aa14.75□□□□□ -0.05
LINC01561-201ENST00000369071 CEP135Q66GS9 1140 aa14.75□□□□□ -0.05
LINC01561-201ENST00000369071 DHX40Q8IX18 779 aaKnown RBP14.75□□□□□ -0.05
LINC01561-201ENST00000369071 DNAJC2Q99543 621 aaKnown RBP14.75□□□□□ -0.05
LINC01561-201ENST00000369071 DBNDD2Q9BQY9 259 aa14.75□□□□□ -0.05
LINC01561-201ENST00000369071 OGFRQ9NZT2 677 aa14.75□□□□□ -0.05
LINC01561-201ENST00000369071 SH3TC1Q8TE82 1336 aa14.75□□□□□ -0.05
LINC01561-201ENST00000369071 HMGB1P09429 215 aaKnown RBP14.75□□□□□ -0.05
LINC01561-201ENST00000369071 NAA30Q147X3 362 aaPredicted RBP14.75□□□□□ -0.05
LINC01561-201ENST00000369071 DHX32Q7L7V1 743 aaKnown RBP14.75□□□□□ -0.05
LINC01561-201ENST00000369071 LRP10Q7Z4F1 713 aa14.75□□□□□ -0.05
LINC01561-201ENST00000369071 AGXT2Q9BYV1 514 aa14.75□□□□□ -0.05
LINC01561-201ENST00000369071 LAMA4Q16363 1823 aa14.75□□□□□ -0.05
LINC01561-201ENST00000369071 PTPDC1A2A3K4 754 aa14.74□□□□□ -0.05
LINC01561-201ENST00000369071 USP27XA6NNY8 438 aa14.74□□□□□ -0.05
LINC01561-201ENST00000369071 EXOSC10Q01780 885 aaKnown RBP14.74□□□□□ -0.05
LINC01561-201ENST00000369071 ATL3Q6DD88 541 aa14.74□□□□□ -0.05
LINC01561-201ENST00000369071 NYAP1Q6ZVC0 841 aa14.74□□□□□ -0.05
LINC01561-201ENST00000369071 RBM33Q96EV2 1170 aaKnown RBP14.74□□□□□ -0.05
LINC01561-201ENST00000369071 USP28Q96RU2 1077 aa14.74□□□□□ -0.05
LINC01561-201ENST00000369071 AXIN2Q9Y2T1 843 aa14.74□□□□□ -0.05
LINC01561-201ENST00000369071 SALL1Q9NSC2 1324 aa14.74□□□□□ -0.05
LINC01561-201ENST00000369071 FER1L4A9Z1Z3 1794 aa14.74□□□□□ -0.05
LINC01561-201ENST00000369071 DDX46Q7L014 1031 aaKnown RBP14.74□□□□□ -0.05
LINC01561-201ENST00000369071 KBTBD3Q8NAB2 608 aa14.74□□□□□ -0.05
LINC01561-201ENST00000369071 CGNQ9P2M7 1197 aaKnown RBP14.74□□□□□ -0.05
LINC01561-201ENST00000369071 CCZ1BP86790 482 aa14.73□□□□□ -0.05
LINC01561-201ENST00000369071 CCZ1P86791 482 aaPredicted RBP14.73□□□□□ -0.05
LINC01561-201ENST00000369071 FAM160A1Q05DH4 1040 aa14.73□□□□□ -0.05
LINC01561-201ENST00000369071 APOBRQ0VD83 1088 aa14.73□□□□□ -0.05
LINC01561-201ENST00000369071 CCDC73Q6ZRK6 1079 aa14.73□□□□□ -0.05
LINC01561-201ENST00000369071 ANKRD13DQ6ZTN6 518 aa14.73□□□□□ -0.05
LINC01561-201ENST00000369071 KIF20AO95235 890 aa14.73□□□□□ -0.05
LINC01561-201ENST00000369071 SKILP12757 684 aa14.73□□□□□ -0.05
LINC01561-201ENST00000369071 FOSBP53539 338 aa14.73□□□□□ -0.05
LINC01561-201ENST00000369071 FGD1P98174 961 aa14.73□□□□□ -0.05
LINC01561-201ENST00000369071 ZNF396Q96N95 335 aaPredicted RBP14.73□□□□□ -0.05
LINC01561-201ENST00000369071 SLC52A2Q9HAB3 445 aa14.73□□□□□ -0.05
LINC01561-201ENST00000369071 KCND1Q9NSA2 647 aa14.73□□□□□ -0.05
LINC01561-201ENST00000369071 ANO10Q9NW15 660 aa14.73□□□□□ -0.05
LINC01561-201ENST00000369071 USP16Q9Y5T5 823 aa14.73□□□□□ -0.05
LINC01561-201ENST00000369071 PALLDQ8WX93 1383 aa14.73□□□□□ -0.05
LINC01561-201ENST00000369071 KDM6AO15550 1401 aaPredicted RBP14.72□□□□□ -0.05
LINC01561-201ENST00000369071 A0A087WWV3 80 aa14.72□□□□□ -0.05
LINC01561-201ENST00000369071 CCDC69A6NI79 296 aa14.72□□□□□ -0.05
LINC01561-201ENST00000369071 BECN2A8MW95 431 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms