RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 USPL1Q5W0Q7 1092 aa15.74■□□□□ 0.11
ECM1-202ENST00000369047 CAVIN1Q6NZI2 390 aaKnown RBP15.74■□□□□ 0.11
ECM1-202ENST00000369047 SMC3Q9UQE7 1217 aa15.74■□□□□ 0.11
ECM1-202ENST00000369047 ATP6V1DQ9Y5K8 247 aa15.74■□□□□ 0.11
ECM1-202ENST00000369047 RPAP1Q9BWH6 1393 aaPredicted RBP15.74■□□□□ 0.11
ECM1-202ENST00000369047 TJP1Q07157 1748 aa15.74■□□□□ 0.11
ECM1-202ENST00000369047 LOC102724428A0A0B4J2F2 783 aa15.74■□□□□ 0.11
ECM1-202ENST00000369047 SIK1P57059 783 aa15.74■□□□□ 0.11
ECM1-202ENST00000369047 ZSCAN23Q3MJ62 389 aa15.74■□□□□ 0.11
ECM1-202ENST00000369047 ATG9AQ7Z3C6 839 aa15.74■□□□□ 0.11
ECM1-202ENST00000369047 PANK2Q9BZ23 570 aa15.74■□□□□ 0.11
ECM1-202ENST00000369047 TAF5LO75529 589 aa15.73■□□□□ 0.11
ECM1-202ENST00000369047 STARD3NLO95772 234 aa15.73■□□□□ 0.11
ECM1-202ENST00000369047 GPT2Q8TD30 523 aa15.73■□□□□ 0.11
ECM1-202ENST00000369047 DBNDD2Q9BQY9 259 aa15.73■□□□□ 0.11
ECM1-202ENST00000369047 ZBTB3Q9H5J0 574 aa15.73■□□□□ 0.11
ECM1-202ENST00000369047 CHMP3Q9Y3E7 222 aa15.73■□□□□ 0.11
ECM1-202ENST00000369047 EYA2O00167 538 aa15.72■□□□□ 0.11
ECM1-202ENST00000369047 STX6O43752 255 aa15.72■□□□□ 0.11
ECM1-202ENST00000369047 ZSCAN22P10073 491 aaPredicted RBP15.72■□□□□ 0.11
ECM1-202ENST00000369047 ATP6V1AP38606 617 aa15.72■□□□□ 0.11
ECM1-202ENST00000369047 BLOC1S2Q6QNY1 142 aa15.72■□□□□ 0.11
ECM1-202ENST00000369047 ANP32BQ92688 251 aaKnown RBP15.72■□□□□ 0.11
ECM1-202ENST00000369047 STK32BQ9NY57 414 aa15.72■□□□□ 0.11
ECM1-202ENST00000369047 MCMDC2Q4G0Z9 681 aa15.71■□□□□ 0.11
ECM1-202ENST00000369047 FOXD4L5Q5VV16 416 aaPredicted RBP15.71■□□□□ 0.11
ECM1-202ENST00000369047 KIF6Q6ZMV9 814 aa15.71■□□□□ 0.11
ECM1-202ENST00000369047 KBTBD3Q8NAB2 608 aa15.71■□□□□ 0.11
ECM1-202ENST00000369047 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.71■□□□□ 0.11
ECM1-202ENST00000369047 FOXD4L4Q8WXT5 416 aaPredicted RBP15.71■□□□□ 0.11
ECM1-202ENST00000369047 SYAP1Q96A49 352 aaPredicted RBP15.71■□□□□ 0.11
ECM1-202ENST00000369047 PLA2G12BQ9BX93 195 aa15.71■□□□□ 0.11
ECM1-202ENST00000369047 U3KPZ7 1027 aaPredicted RBP15.71■□□□□ 0.11
ECM1-202ENST00000369047 SYT1P21579 422 aa15.71■□□□□ 0.1
ECM1-202ENST00000369047 TMEM87AQ8NBN3 555 aa15.71■□□□□ 0.1
ECM1-202ENST00000369047 PCCAP05165 728 aaPredicted RBP15.7■□□□□ 0.1
ECM1-202ENST00000369047 CPA1P15085 419 aa15.7■□□□□ 0.1
ECM1-202ENST00000369047 PROM2Q8N271 834 aa15.7■□□□□ 0.1
ECM1-202ENST00000369047 RTN4Q9NQC3 1192 aaKnown RBP15.7■□□□□ 0.1
ECM1-202ENST00000369047 HELLSQ9NRZ9 838 aa15.7■□□□□ 0.1
ECM1-202ENST00000369047 TAF1LQ8IZX4 1826 aa15.7■□□□□ 0.1
ECM1-202ENST00000369047 RPS6KB1P23443 525 aa15.69■□□□□ 0.1
ECM1-202ENST00000369047 CCDC57Q2TAC2 916 aa15.69■□□□□ 0.1
ECM1-202ENST00000369047 ZNF589Q86UQ0 364 aaPredicted RBP15.69■□□□□ 0.1
ECM1-202ENST00000369047 KLHL34Q8N239 644 aa15.69■□□□□ 0.1
ECM1-202ENST00000369047 NEUROD6Q96NK8 337 aa15.69■□□□□ 0.1
ECM1-202ENST00000369047 DNAJC2Q99543 621 aaKnown RBP15.69■□□□□ 0.1
ECM1-202ENST00000369047 AKAP2Q9Y2D5 859 aa15.69■□□□□ 0.1
ECM1-202ENST00000369047 SH3TC1Q8TE82 1336 aa15.69■□□□□ 0.1
ECM1-202ENST00000369047 NASPP49321 788 aaPredicted RBP15.69■□□□□ 0.1
ECM1-202ENST00000369047 HSP90AB3PQ58FF7 597 aa15.69■□□□□ 0.1
ECM1-202ENST00000369047 SPEF2Q9C093 1822 aa15.69■□□□□ 0.1
ECM1-202ENST00000369047 GJB2P29033 226 aa15.68■□□□□ 0.1
ECM1-202ENST00000369047 CCDC173Q0VFZ6 552 aa15.68■□□□□ 0.1
ECM1-202ENST00000369047 ME3Q16798 604 aa15.68■□□□□ 0.1
ECM1-202ENST00000369047 CSPP1Q1MSJ5 1256 aa15.68■□□□□ 0.1
ECM1-202ENST00000369047 LRSAM1Q6UWE0 723 aa15.68■□□□□ 0.1
ECM1-202ENST00000369047 CCDC83Q8IWF9 413 aa15.68■□□□□ 0.1
ECM1-202ENST00000369047 EDC3Q96F86 508 aaKnown RBP15.68■□□□□ 0.1
ECM1-202ENST00000369047 PAG1Q9NWQ8 432 aa15.68■□□□□ 0.1
ECM1-202ENST00000369047 CEP126Q9P2H0 1117 aa15.68■□□□□ 0.1
ECM1-202ENST00000369047 F13A1P00488 732 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 PDCP20941 246 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 LRRFIP1Q32MZ4 808 aaKnown RBP15.67■□□□□ 0.1
ECM1-202ENST00000369047 DNAJC10Q8IXB1 793 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 ZBTB38Q8NAP3 1195 aaPredicted RBP15.67■□□□□ 0.1
ECM1-202ENST00000369047 C4BP0C0L5 1744 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 COL5A3P25940 1745 aaPredicted RBP15.67■□□□□ 0.1
ECM1-202ENST00000369047 QSER1Q2KHR3 1735 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 ZNF609O15014 1411 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 LARGE1O95461 756 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 CSF1RP07333 972 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 RC3H1Q5TC82 1133 aaKnown RBP15.67■□□□□ 0.1
ECM1-202ENST00000369047 GIGYF2Q6Y7W6 1299 aaKnown RBP15.67■□□□□ 0.1
ECM1-202ENST00000369047 MAP3K15Q6ZN16 1313 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 USP48Q86UV5 1035 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 AK7Q96M32 723 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 CDHR2Q9BYE9 1310 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 CNTNAP4Q9C0A0 1308 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 LRRC4BQ9NT99 713 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 TMEM63CQ9P1W3 806 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 TPCN1Q9ULQ1 816 aa15.67■□□□□ 0.1
ECM1-202ENST00000369047 PHF14O94880 888 aa15.66■□□□□ 0.1
ECM1-202ENST00000369047 HMGB1P09429 215 aaKnown RBP15.66■□□□□ 0.1
ECM1-202ENST00000369047 TIMM10P62072 90 aa15.66■□□□□ 0.1
ECM1-202ENST00000369047 FLAD1Q8NFF5 587 aa15.66■□□□□ 0.1
ECM1-202ENST00000369047 PPP1R9BQ96SB3 815 aa15.66■□□□□ 0.1
ECM1-202ENST00000369047 LARP6Q9BRS8 491 aaKnown RBP15.66■□□□□ 0.1
ECM1-202ENST00000369047 A0A1B0GUL7 405 aa15.66■□□□□ 0.1
ECM1-202ENST00000369047 SLC15A2Q16348 729 aa15.66■□□□□ 0.1
ECM1-202ENST00000369047 LRRC24Q50LG9 513 aa15.66■□□□□ 0.1
ECM1-202ENST00000369047 NEK1Q96PY6 1258 aa15.66■□□□□ 0.1
ECM1-202ENST00000369047 DSCC1Q9BVC3 393 aa15.66■□□□□ 0.1
ECM1-202ENST00000369047 IFIT1P09914 478 aaKnown RBP15.65■□□□□ 0.1
ECM1-202ENST00000369047 CCDC158Q5M9N0 1113 aa15.65■□□□□ 0.1
ECM1-202ENST00000369047 DDX46Q7L014 1031 aaKnown RBP15.65■□□□□ 0.1
ECM1-202ENST00000369047 TRIM44Q96DX7 344 aaPredicted RBP15.65■□□□□ 0.1
ECM1-202ENST00000369047 CHAMP1Q96JM3 812 aa15.65■□□□□ 0.1
ECM1-202ENST00000369047 ITPK1Q13572 414 aa15.64■□□□□ 0.09
ECM1-202ENST00000369047 ZMYM1Q5SVZ6 1142 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms