RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 SUSD4Q5VX71 490 aa14.51□□□□□ -0.09
H3F3A-203ENST00000366815 NUTM1Q86Y26 1132 aa14.51□□□□□ -0.09
H3F3A-203ENST00000366815 RBM46Q8TBY0 533 aaKnown RBP14.51□□□□□ -0.09
H3F3A-203ENST00000366815 ZDHHC16Q969W1 377 aa14.51□□□□□ -0.09
H3F3A-203ENST00000366815 TAOK3Q9H2K8 898 aa14.51□□□□□ -0.09
H3F3A-203ENST00000366815 SNED1Q8TER0 1413 aa14.5□□□□□ -0.09
H3F3A-203ENST00000366815 NTSR2O95665 410 aa14.5□□□□□ -0.09
H3F3A-203ENST00000366815 GTF2E1P29083 439 aaPredicted RBP14.5□□□□□ -0.09
H3F3A-203ENST00000366815 APAF1O14727 1248 aa14.49□□□□□ -0.09
H3F3A-203ENST00000366815 ZEB1P37275 1124 aaPredicted RBP14.49□□□□□ -0.09
H3F3A-203ENST00000366815 CCDC93Q567U6 631 aa14.49□□□□□ -0.09
H3F3A-203ENST00000366815 NECTIN2Q92692 538 aa14.49□□□□□ -0.09
H3F3A-203ENST00000366815 SLC4A5Q9BY07 1137 aa14.49□□□□□ -0.09
H3F3A-203ENST00000366815 DDX21Q9NR30 783 aaKnown RBP eCLIP14.49□□□□□ -0.09
H3F3A-203ENST00000366815 LAS1LQ9Y4W2 734 aaKnown RBP14.49□□□□□ -0.09
H3F3A-203ENST00000366815 LAMB2P55268 1798 aa14.49□□□□□ -0.09
H3F3A-203ENST00000366815 HOXB7P09629 217 aa14.48□□□□□ -0.09
H3F3A-203ENST00000366815 ZNF853P0CG23 659 aa14.48□□□□□ -0.09
H3F3A-203ENST00000366815 ALDH1B1P30837 517 aa14.48□□□□□ -0.09
H3F3A-203ENST00000366815 PARP10Q53GL7 1025 aa14.48□□□□□ -0.09
H3F3A-203ENST00000366815 OLFM4Q6UX06 510 aa14.48□□□□□ -0.09
H3F3A-203ENST00000366815 COPS6Q7L5N1 327 aa14.48□□□□□ -0.09
H3F3A-203ENST00000366815 C16orf71Q8IYS4 520 aaPredicted RBP14.48□□□□□ -0.09
H3F3A-203ENST00000366815 XAGE3Q8WTP9 111 aa14.48□□□□□ -0.09
H3F3A-203ENST00000366815 POTECB2RU33 542 aa14.47□□□□□ -0.09
H3F3A-203ENST00000366815 VEGFAP15692 232 aaPredicted RBP14.47□□□□□ -0.09
H3F3A-203ENST00000366815 HOXA10P31260 410 aaPredicted RBP14.47□□□□□ -0.09
H3F3A-203ENST00000366815 FSTL1Q12841 308 aa14.47□□□□□ -0.09
H3F3A-203ENST00000366815 CCDC184Q52MB2 194 aa14.47□□□□□ -0.09
H3F3A-203ENST00000366815 ADAM33Q9BZ11 813 aa14.47□□□□□ -0.09
H3F3A-203ENST00000366815 MBIPQ9NS73 344 aa14.47□□□□□ -0.09
H3F3A-203ENST00000366815 CHPF2Q9P2E5 772 aa14.47□□□□□ -0.09
H3F3A-203ENST00000366815 APLP1P51693 650 aa14.46□□□□□ -0.09
H3F3A-203ENST00000366815 FKBP4Q02790 459 aaKnown RBP eCLIP14.46□□□□□ -0.09
H3F3A-203ENST00000366815 PPP1R42Q7Z4L9 355 aa14.46□□□□□ -0.09
H3F3A-203ENST00000366815 PTPN5P54829 565 aa14.45□□□□□ -0.1
H3F3A-203ENST00000366815 AIMP1Q12904 312 aaKnown RBP14.45□□□□□ -0.1
H3F3A-203ENST00000366815 SLC10A5Q5PT55 438 aa14.45□□□□□ -0.1
H3F3A-203ENST00000366815 HDGFL1Q5TGJ6 251 aa14.45□□□□□ -0.1
H3F3A-203ENST00000366815 DUSP27Q5VZP5 1158 aa14.45□□□□□ -0.1
H3F3A-203ENST00000366815 RTKN2Q8IZC4 609 aa14.45□□□□□ -0.1
H3F3A-203ENST00000366815 ZBED2Q9BTP6 218 aa14.45□□□□□ -0.1
H3F3A-203ENST00000366815 RNF123Q5XPI4 1314 aa14.44□□□□□ -0.1
H3F3A-203ENST00000366815 GOLGA8CPA6NN73 597 aa14.44□□□□□ -0.1
H3F3A-203ENST00000366815 TCIRG1Q13488 830 aa14.44□□□□□ -0.1
H3F3A-203ENST00000366815 HSP90AB3PQ58FF7 597 aa14.44□□□□□ -0.1
H3F3A-203ENST00000366815 NLRP10Q86W26 655 aa14.44□□□□□ -0.1
H3F3A-203ENST00000366815 RPGRQ92834 1020 aaKnown RBP14.44□□□□□ -0.1
H3F3A-203ENST00000366815 CRAMP1Q96RY5 1269 aa14.44□□□□□ -0.1
H3F3A-203ENST00000366815 UTP14AQ9BVJ6 771 aaKnown RBP14.44□□□□□ -0.1
H3F3A-203ENST00000366815 IFT57Q9NWB7 429 aa14.44□□□□□ -0.1
H3F3A-203ENST00000366815 DBF4Q9UBU7 674 aaPredicted RBP14.44□□□□□ -0.1
H3F3A-203ENST00000366815 DDX60Q8IY21 1712 aaKnown RBP14.44□□□□□ -0.1
H3F3A-203ENST00000366815 DDNO94850 711 aaPredicted RBP14.43□□□□□ -0.1
H3F3A-203ENST00000366815 GNAI1P63096 354 aa14.43□□□□□ -0.1
H3F3A-203ENST00000366815 DNAJC5GQ8N7S2 189 aa14.43□□□□□ -0.1
H3F3A-203ENST00000366815 SMC1BQ8NDV3 1235 aa14.43□□□□□ -0.1
H3F3A-203ENST00000366815 ZNF277Q9NRM2 450 aaPredicted RBP14.43□□□□□ -0.1
H3F3A-203ENST00000366815 SCN4AP35499 1836 aa14.43□□□□□ -0.1
H3F3A-203ENST00000366815 COL4A5P29400 1685 aa14.42□□□□□ -0.1
H3F3A-203ENST00000366815 CALD1Q05682 793 aaKnown RBP14.42□□□□□ -0.1
H3F3A-203ENST00000366815 CC2D2BQ6DHV5 1058 aa14.42□□□□□ -0.1
H3F3A-203ENST00000366815 SLC51AQ86UW1 340 aa14.42□□□□□ -0.1
H3F3A-203ENST00000366815 SYNE4Q8N205 404 aa14.42□□□□□ -0.1
H3F3A-203ENST00000366815 MRPL50Q8N5N7 158 aaKnown RBP14.42□□□□□ -0.1
H3F3A-203ENST00000366815 PLBD2Q8NHP8 589 aa14.42□□□□□ -0.1
H3F3A-203ENST00000366815 RBM17Q96I25 401 aaKnown RBP14.42□□□□□ -0.1
H3F3A-203ENST00000366815 NLRP3Q96P20 1036 aa14.42□□□□□ -0.1
H3F3A-203ENST00000366815 PSMD1Q99460 953 aa14.42□□□□□ -0.1
H3F3A-203ENST00000366815 BHMG1C9JSJ3 638 aaPredicted RBP14.41□□□□□ -0.1
H3F3A-203ENST00000366815 SEMA3EO15041 775 aa14.41□□□□□ -0.1
H3F3A-203ENST00000366815 IARSP41252 1262 aaKnown RBP14.41□□□□□ -0.1
H3F3A-203ENST00000366815 ISCA1Q9BUE6 129 aa14.41□□□□□ -0.1
H3F3A-203ENST00000366815 HYPKQ9NX55 129 aa14.41□□□□□ -0.1
H3F3A-203ENST00000366815 TAF1P21675 1872 aa14.41□□□□□ -0.1
H3F3A-203ENST00000366815 ZNF541Q9H0D2 1346 aa14.41□□□□□ -0.1
H3F3A-203ENST00000366815 PPEF1O14829 653 aaPredicted RBP14.4□□□□□ -0.1
H3F3A-203ENST00000366815 TRMT112Q9UI30 125 aaKnown RBP14.4□□□□□ -0.1
H3F3A-203ENST00000366815 SH3TC1Q8TE82 1336 aa14.4□□□□□ -0.1
H3F3A-203ENST00000366815 FZD9O00144 591 aa14.39□□□□□ -0.11
H3F3A-203ENST00000366815 HCLS1P14317 486 aaPredicted RBP14.39□□□□□ -0.11
H3F3A-203ENST00000366815 HTRA3P83110 453 aa14.39□□□□□ -0.11
H3F3A-203ENST00000366815 GRIPAP1Q4V328 841 aa14.39□□□□□ -0.11
H3F3A-203ENST00000366815 C8orf58Q8NAV2 365 aa14.39□□□□□ -0.11
H3F3A-203ENST00000366815 PCDHGA10Q9Y5H3 936 aa14.39□□□□□ -0.11
H3F3A-203ENST00000366815 ABCC4O15439 1325 aa14.39□□□□□ -0.11
H3F3A-203ENST00000366815 LRRC37AA6NMS7 1700 aa14.38□□□□□ -0.11
H3F3A-203ENST00000366815 ADAMTSL1Q8N6G6 1762 aa14.38□□□□□ -0.11
H3F3A-203ENST00000366815 TESPA1A2RU30 521 aaPredicted RBP14.38□□□□□ -0.11
H3F3A-203ENST00000366815 ELL2O00472 640 aaPredicted RBP14.38□□□□□ -0.11
H3F3A-203ENST00000366815 CCDC27Q2M243 656 aa14.38□□□□□ -0.11
H3F3A-203ENST00000366815 NBPF3Q9H094 633 aa14.38□□□□□ -0.11
H3F3A-203ENST00000366815 ATP6V0A2Q9Y487 856 aa14.38□□□□□ -0.11
H3F3A-203ENST00000366815 ATP5J2-PTCD1G3V325 749 aa14.37□□□□□ -0.11
H3F3A-203ENST00000366815 TULP1O00294 542 aaPredicted RBP14.37□□□□□ -0.11
H3F3A-203ENST00000366815 TRIM28Q13263 835 aaKnown RBP14.37□□□□□ -0.11
H3F3A-203ENST00000366815 ZNF428Q96B54 188 aa14.37□□□□□ -0.11
H3F3A-203ENST00000366815 PHAXQ9H814 394 aaKnown RBP14.37□□□□□ -0.11
H3F3A-203ENST00000366815 COL4A1P02462 1669 aa14.36□□□□□ -0.11
H3F3A-203ENST00000366815 IQCA1LA6NCM1 817 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms