RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 KCNH4Q9UQ05 1017 aa8.32□□□□□ -1.08
RNU4-4P-201ENST00000364588 SUPT6HQ7KZ85 1726 aaKnown RBP8.32□□□□□ -1.08
RNU4-4P-201ENST00000364588 GPATCH8Q9UKJ3 1502 aaKnown RBP8.31□□□□□ -1.08
RNU4-4P-201ENST00000364588 NEURL1BA8MQ27 555 aa8.31□□□□□ -1.08
RNU4-4P-201ENST00000364588 PTCD1O75127 700 aaKnown RBP8.31□□□□□ -1.08
RNU4-4P-201ENST00000364588 HNRNPMP52272 730 aaKnown RBP eCLIP8.31□□□□□ -1.08
RNU4-4P-201ENST00000364588 SPEM2Q0P670 501 aa8.31□□□□□ -1.08
RNU4-4P-201ENST00000364588 GALNT6Q8NCL4 622 aa8.31□□□□□ -1.08
RNU4-4P-201ENST00000364588 EDARADDQ8WWZ3 215 aa8.31□□□□□ -1.08
RNU4-4P-201ENST00000364588 HCN2Q9UL51 889 aa8.31□□□□□ -1.08
RNU4-4P-201ENST00000364588 SPAG9O60271 1321 aaKnown RBP8.3□□□□□ -1.08
RNU4-4P-201ENST00000364588 EPXP11678 715 aa8.3□□□□□ -1.08
RNU4-4P-201ENST00000364588 EFCC1Q9HA90 598 aa8.3□□□□□ -1.08
RNU4-4P-201ENST00000364588 TIMELESSQ9UNS1 1208 aa8.3□□□□□ -1.08
RNU4-4P-201ENST00000364588 DNMT3AQ9Y6K1 912 aaPredicted RBP8.3□□□□□ -1.08
RNU4-4P-201ENST00000364588 PHF20L1A8MW92 1017 aa8.29□□□□□ -1.08
RNU4-4P-201ENST00000364588 SIN3BO75182 1162 aa8.29□□□□□ -1.08
RNU4-4P-201ENST00000364588 AMPD1P23109 780 aa8.29□□□□□ -1.08
RNU4-4P-201ENST00000364588 ATP2B4P23634 1241 aa8.29□□□□□ -1.08
RNU4-4P-201ENST00000364588 SFSWAPQ12872 951 aaKnown RBP8.29□□□□□ -1.08
RNU4-4P-201ENST00000364588 C11orf91Q3C1V1 193 aa8.29□□□□□ -1.08
RNU4-4P-201ENST00000364588 KLK14Q9P0G3 267 aa8.29□□□□□ -1.08
RNU4-4P-201ENST00000364588 CFDP1Q9UEE9 299 aaPredicted RBP8.29□□□□□ -1.08
RNU4-4P-201ENST00000364588 CCNB3Q8WWL7 1395 aa8.29□□□□□ -1.08
RNU4-4P-201ENST00000364588 ATP7AQ04656 1500 aa8.29□□□□□ -1.08
RNU4-4P-201ENST00000364588 CNTLNQ9NXG0 1405 aa8.29□□□□□ -1.08
RNU4-4P-201ENST00000364588 CLTCQ00610 1675 aaKnown RBP8.28□□□□□ -1.08
RNU4-4P-201ENST00000364588 INO80Q9ULG1 1556 aaPredicted RBP8.28□□□□□ -1.08
RNU4-4P-201ENST00000364588 MTUS2Q5JR59 1369 aa8.28□□□□□ -1.08
RNU4-4P-201ENST00000364588 SHISA8B8ZZ34 492 aa8.28□□□□□ -1.08
RNU4-4P-201ENST00000364588 PIK3R2O00459 728 aa8.28□□□□□ -1.08
RNU4-4P-201ENST00000364588 ARSDP51689 593 aa8.28□□□□□ -1.08
RNU4-4P-201ENST00000364588 C16orf46Q6P387 395 aa8.28□□□□□ -1.08
RNU4-4P-201ENST00000364588 SYT9Q86SS6 491 aa8.28□□□□□ -1.08
RNU4-4P-201ENST00000364588 MROH2AA6NES4 1674 aa8.27□□□□□ -1.08
RNU4-4P-201ENST00000364588 IDH3AP50213 366 aa8.27□□□□□ -1.09
RNU4-4P-201ENST00000364588 PCBP4P57723 403 aaKnown RBP8.27□□□□□ -1.09
RNU4-4P-201ENST00000364588 KANK3Q6NY19 840 aa8.27□□□□□ -1.09
RNU4-4P-201ENST00000364588 FCHSD1Q86WN1 690 aa8.27□□□□□ -1.09
RNU4-4P-201ENST00000364588 MKNK1Q9BUB5 465 aa8.27□□□□□ -1.09
RNU4-4P-201ENST00000364588 DMGDHQ9UI17 866 aaKnown RBP8.27□□□□□ -1.09
RNU4-4P-201ENST00000364588 BCS1LQ9Y276 419 aa8.27□□□□□ -1.09
RNU4-4P-201ENST00000364588 PTPRTO14522 1441 aa8.27□□□□□ -1.09
RNU4-4P-201ENST00000364588 ZNF644Q9H582 1327 aaPredicted RBP8.27□□□□□ -1.09
RNU4-4P-201ENST00000364588 A2MP01023 1474 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 PLEKHH2Q8IVE3 1493 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 ZMYM3Q14202 1370 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 CAMSAP1Q5T5Y3 1602 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 KCNMA1Q12791 1236 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 GGT6Q6P531 493 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 C1orf229Q6ZS94 237 aaPredicted RBP8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 BEND7Q8N7W2 519 aaPredicted RBP8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 SLC30A3Q99726 388 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 RRAGCQ9HB90 399 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 C11orf16Q9NQ32 467 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 MKL2Q9ULH7 1088 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 USTQ9Y2C2 406 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 NCOA1Q15788 1441 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 KIAA1107Q9UPP5 1409 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 PLXNC1O60486 1568 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 TIAM1Q13009 1591 aa8.26□□□□□ -1.09
RNU4-4P-201ENST00000364588 ELOA3CA0A087WX78 387 aaPredicted RBP8.25□□□□□ -1.09
RNU4-4P-201ENST00000364588 ELOA3DA6NLF2 546 aaPredicted RBP8.25□□□□□ -1.09
RNU4-4P-201ENST00000364588 INPP5BP32019 993 aa8.25□□□□□ -1.09
RNU4-4P-201ENST00000364588 ELOA3BQ3SY89 546 aa8.25□□□□□ -1.09
RNU4-4P-201ENST00000364588 COX20Q5RI15 118 aa8.25□□□□□ -1.09
RNU4-4P-201ENST00000364588 ELOA3Q8NG57 546 aa8.25□□□□□ -1.09
RNU4-4P-201ENST00000364588 TNFRSF25Q93038 417 aa8.25□□□□□ -1.09
RNU4-4P-201ENST00000364588 IFT43Q96FT9 208 aa8.25□□□□□ -1.09
RNU4-4P-201ENST00000364588 PNMA5Q96PV4 448 aa8.25□□□□□ -1.09
RNU4-4P-201ENST00000364588 LRFN2Q9ULH4 789 aa8.25□□□□□ -1.09
RNU4-4P-201ENST00000364588 NPATQ14207 1427 aa8.25□□□□□ -1.09
RNU4-4P-201ENST00000364588 ADGBQ8N7X0 1667 aa8.24□□□□□ -1.09
RNU4-4P-201ENST00000364588 EHBP1L1Q8N3D4 1523 aa8.24□□□□□ -1.09
RNU4-4P-201ENST00000364588 TMEM88BA6NKF7 163 aa8.24□□□□□ -1.09
RNU4-4P-201ENST00000364588 MICAL2O94851 1124 aa8.24□□□□□ -1.09
RNU4-4P-201ENST00000364588 ALAS2P22557 587 aa8.24□□□□□ -1.09
RNU4-4P-201ENST00000364588 BRD2P25440 801 aaKnown RBP8.24□□□□□ -1.09
RNU4-4P-201ENST00000364588 CHSY3Q70JA7 882 aa8.24□□□□□ -1.09
RNU4-4P-201ENST00000364588 KLF15Q9UIH9 416 aa8.24□□□□□ -1.09
RNU4-4P-201ENST00000364588 LTBP4Q8N2S1 1624 aa8.24□□□□□ -1.09
RNU4-4P-201ENST00000364588 MYO3AQ8NEV4 1616 aa8.24□□□□□ -1.09
RNU4-4P-201ENST00000364588 ADARB2-AS1A8MUL3 147 aa8.23□□□□□ -1.09
RNU4-4P-201ENST00000364588 IRS1P35568 1242 aa8.23□□□□□ -1.09
RNU4-4P-201ENST00000364588 CCINQ13939 588 aa8.23□□□□□ -1.09
RNU4-4P-201ENST00000364588 GRIN2CQ14957 1233 aa8.23□□□□□ -1.09
RNU4-4P-201ENST00000364588 B4GALNT3Q6L9W6 998 aa8.23□□□□□ -1.09
RNU4-4P-201ENST00000364588 RAB44Q7Z6P3 723 aaPredicted RBP8.23□□□□□ -1.09
RNU4-4P-201ENST00000364588 TREML1Q86YW5 311 aa8.23□□□□□ -1.09
RNU4-4P-201ENST00000364588 ABTB2Q8N961 1025 aa8.23□□□□□ -1.09
RNU4-4P-201ENST00000364588 BHMTQ93088 406 aa8.23□□□□□ -1.09
RNU4-4P-201ENST00000364588 PTPRKQ15262 1439 aa8.22□□□□□ -1.09
RNU4-4P-201ENST00000364588 CEP162Q5TB80 1403 aa8.22□□□□□ -1.09
RNU4-4P-201ENST00000364588 ZNF142P52746 1687 aaPredicted RBP8.22□□□□□ -1.09
RNU4-4P-201ENST00000364588 MBD5Q9P267 1494 aa8.22□□□□□ -1.09
RNU4-4P-201ENST00000364588 ADH7P40394 386 aa8.22□□□□□ -1.09
RNU4-4P-201ENST00000364588 DGKGP49619 791 aa8.22□□□□□ -1.09
RNU4-4P-201ENST00000364588 BTBD6Q96KE9 485 aa8.22□□□□□ -1.09
RNU4-4P-201ENST00000364588 MDFIQ99750 246 aa8.22□□□□□ -1.09
RNU4-4P-201ENST00000364588 ARID3AQ99856 593 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms