RNA–Protein interactions for RNA: ENST00000364313.1

RNVU1-3-201, Transcript of RNA, variant U1 small nuclear 3, humanhuman

BASIC

Gene RNVU1-3, Length 161 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-3-201ENST00000364313 ETFBP38117 255 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 SLC19A1P41440 591 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 RELBQ01201 579 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 TYRO3Q06418 890 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 RASA3Q14644 834 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 IFFO2Q5TF58 517 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 SPRYD7Q5W111 196 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 SLITRK4Q8IW52 837 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 HSH2DQ96JZ2 352 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 TSEN34Q9BSV6 310 aaKnown RBP5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 CCDC113Q9H0I3 377 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 ZNF395Q9H8N7 513 aaPredicted RBP5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 GINM1Q9NU53 330 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 HCSTQ9UBK5 93 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 PRKAG3Q9UGI9 489 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 SALL4Q9UJQ4 1053 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 TTF2Q9UNY4 1162 aaKnown RBP5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 EFR3BQ9Y2G0 817 aa5.6□□□□□ -1.51
RNVU1-3-201ENST00000364313 hCG_2014768A0A024R1R8 64 aa5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 XYLBO75191 536 aa5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 HOXD8P13378 290 aaPredicted RBP5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 WDR4P57081 412 aaKnown RBP5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 RPS26P62854 115 aaKnown RBP5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 LMNB2Q03252 620 aa5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 CCDC85BQ15834 202 aaPredicted RBP5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 PEAR1Q5VY43 1037 aaPredicted RBP5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 FBXL19Q6PCT2 694 aa5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 ANKS3Q6ZW76 656 aa5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 CCDC84Q86UT8 332 aaPredicted RBP5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 PHC3Q8NDX5 983 aa5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 AIDAQ96BJ3 306 aa5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 LRRC3Q9BY71 257 aa5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 CRISPLD1Q9H336 500 aa5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 ZFAND3Q9H8U3 227 aa5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 EFCC1Q9HA90 598 aa5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 SUPT16HQ9Y5B9 1047 aaKnown RBP5.59□□□□□ -1.51
RNVU1-3-201ENST00000364313 A0A1B0GTH6 734 aa5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 TMEM238LA0A1B0GVL6 79 aa5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 POLR3DP05423 398 aaPredicted RBP5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 CES1P23141 567 aa5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 GBP2P32456 591 aaPredicted RBP5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 TNNI3KQ59H18 835 aa5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 ARSHQ5FYA8 562 aa5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 PCNX4Q63HM2 1172 aa5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 ZNF598Q86UK7 904 aaKnown RBP5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 OR13H1Q8NG92 308 aa5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 MICAL1Q8TDZ2 1067 aa5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 DEPDC7Q96QD5 511 aa5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 SRPK1Q96SB4 655 aaKnown RBP5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 ABCB6Q9NP58 842 aa5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 SNTG2Q9NY99 539 aa5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 PKD2L1Q9P0L9 805 aa5.58□□□□□ -1.52
RNVU1-3-201ENST00000364313 U2SURPO15042 1029 aaKnown RBP5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 MARCH6O60337 910 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 ITPKAP23677 461 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 GRIN2CQ14957 1233 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 TTC39BQ5VTQ0 682 aaPredicted RBP5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 AGMOQ6ZNB7 445 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 BICDL1Q6ZP65 573 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 NLRP8Q86W28 1048 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 CCNJLQ8IV13 435 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 JMYQ8N9B5 988 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 TRPM4Q8TD43 1214 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 SHDQ96IW2 340 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 TCF12Q99081 682 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 CEP44Q9C0F1 390 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 EHD4Q9H223 541 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 PCDH12Q9NPG4 1184 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 IFT57Q9NWB7 429 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 USP20Q9Y2K6 914 aa5.57□□□□□ -1.52
RNVU1-3-201ENST00000364313 MINDY4BA8MYZ0 360 aa5.56□□□□□ -1.52
RNVU1-3-201ENST00000364313 KIF4AO95239 1232 aa5.56□□□□□ -1.52
RNVU1-3-201ENST00000364313 SOX18P35713 384 aa5.56□□□□□ -1.52
RNVU1-3-201ENST00000364313 ANAPC15P60006 121 aa5.56□□□□□ -1.52
RNVU1-3-201ENST00000364313 CCDC181Q5TID7 509 aa5.56□□□□□ -1.52
RNVU1-3-201ENST00000364313 KIAA0907Q7Z7F0 614 aaPredicted RBP5.56□□□□□ -1.52
RNVU1-3-201ENST00000364313 SRRTQ9BXP5 876 aaKnown RBP5.56□□□□□ -1.52
RNVU1-3-201ENST00000364313 OXCT2Q9BYC2 517 aaPredicted RBP5.56□□□□□ -1.52
RNVU1-3-201ENST00000364313 TRIM55Q9BYV6 548 aa5.56□□□□□ -1.52
RNVU1-3-201ENST00000364313 SPC25Q9HBM1 224 aa5.56□□□□□ -1.52
RNVU1-3-201ENST00000364313 COL4A3BPQ9Y5P4 624 aa5.56□□□□□ -1.52
RNVU1-3-201ENST00000364313 ABCC9O60706 1549 aa5.56□□□□□ -1.52
RNVU1-3-201ENST00000364313 A0A1W2PNR3 127 aa5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 DNAJC6O75061 913 aa5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 MSX1P28360 303 aa5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 GIPRP48546 466 aa5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 LIG3P49916 1009 aa5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 CAMK2GQ13555 558 aaPredicted RBP5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 RASGRF1Q13972 1273 aa5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 RPS26P11Q5JNZ5 115 aaPredicted RBP5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 LRRC69Q6ZNQ3 347 aa5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 FAM196AQ6ZSG2 479 aa5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 RBBP8NLQ8NC74 664 aaPredicted RBP5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 OR6P1Q8NGX9 317 aa5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 INSM2Q96T92 566 aaPredicted RBP5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 TRIM56Q9BRZ2 755 aaKnown RBP5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 TOR4AQ9NXH8 423 aa5.55□□□□□ -1.52
RNVU1-3-201ENST00000364313 FAM221BA6H8Z2 402 aa5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 PPP1R12AO14974 1030 aaPredicted RBP5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 PF4P02776 101 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms