RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 AMOTL2Q9Y2J4 779 aa4.73□□□□□ -1.65
RNU6-428P-201ENST00000362942 SPDYE3A6NKU9 549 aa4.72□□□□□ -1.65
RNU6-428P-201ENST00000362942 RNF225M0QZC1 329 aaPredicted RBP4.72□□□□□ -1.65
RNU6-428P-201ENST00000362942 CPNE3O75131 537 aaKnown RBP4.72□□□□□ -1.65
RNU6-428P-201ENST00000362942 EIF2AK2P19525 551 aaKnown RBP4.72□□□□□ -1.65
RNU6-428P-201ENST00000362942 ATP2B2Q01814 1243 aa4.72□□□□□ -1.65
RNU6-428P-201ENST00000362942 PLCB3Q01970 1234 aa4.72□□□□□ -1.65
RNU6-428P-201ENST00000362942 TMC7Q7Z402 723 aa4.72□□□□□ -1.65
RNU6-428P-201ENST00000362942 SCARF2Q96GP6 870 aaPredicted RBP4.72□□□□□ -1.65
RNU6-428P-201ENST00000362942 BTBD6Q96KE9 485 aa4.72□□□□□ -1.65
RNU6-428P-201ENST00000362942 STK17AQ9UEE5 414 aa4.72□□□□□ -1.65
RNU6-428P-201ENST00000362942 KLF15Q9UIH9 416 aa4.72□□□□□ -1.65
RNU6-428P-201ENST00000362942 MKL2Q9ULH7 1088 aa4.72□□□□□ -1.65
RNU6-428P-201ENST00000362942 A6NHS1 94 aa4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 TREHO43280 583 aa4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 LILRB5O75023 590 aa4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 RGS9O75916 674 aaPredicted RBP4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 SMNDC1O75940 238 aaKnown RBP eCLIP4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 KIF4AO95239 1232 aa4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 CPB1P15086 417 aa4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 ITGAEP38570 1179 aa4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 COL19A1Q14993 1142 aa4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 BEND7Q8N7W2 519 aaPredicted RBP4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 C1orf127Q8N9H9 656 aa4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 WHAMMQ8TF30 809 aa4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 TTC9Q92623 222 aa4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 NSUN5Q96P11 429 aaKnown RBP4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 NIF3L1Q9GZT8 377 aa4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 ZFYVE28Q9HCC9 887 aa4.71□□□□□ -1.66
RNU6-428P-201ENST00000362942 SHISA8B8ZZ34 492 aa4.7□□□□□ -1.66
RNU6-428P-201ENST00000362942 ARHGEF15O94989 841 aa4.7□□□□□ -1.66
RNU6-428P-201ENST00000362942 MLLT1Q03111 559 aaPredicted RBP4.7□□□□□ -1.66
RNU6-428P-201ENST00000362942 PSAPL1Q6NUJ1 521 aa4.7□□□□□ -1.66
RNU6-428P-201ENST00000362942 C1orf229Q6ZS94 237 aaPredicted RBP4.7□□□□□ -1.66
RNU6-428P-201ENST00000362942 CSRNP1Q96S65 589 aa4.7□□□□□ -1.66
RNU6-428P-201ENST00000362942 MDFIQ99750 246 aa4.7□□□□□ -1.66
RNU6-428P-201ENST00000362942 JPH1Q9HDC5 661 aaPredicted RBP4.7□□□□□ -1.66
RNU6-428P-201ENST00000362942 NOP53Q9NZM5 478 aaKnown RBP4.7□□□□□ -1.66
RNU6-428P-201ENST00000362942 CNTN3Q9P232 1028 aa4.7□□□□□ -1.66
RNU6-428P-201ENST00000362942 FOXD3Q9UJU5 478 aaPredicted RBP4.7□□□□□ -1.66
RNU6-428P-201ENST00000362942 ZBTB42B2RXF5 422 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 M0R082 166 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 GPR182O15218 404 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 TRIM26Q12899 539 aaPredicted RBP4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 ALG1LQ6GMV1 187 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 HFE2Q6ZVN8 426 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 ZNF417Q8TAU3 575 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 DCAF11Q8TEB1 546 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 PLD4Q96BZ4 506 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 ZNF587Q96SQ5 575 aaPredicted RBP4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 SMG9Q9H0W8 520 aaKnown RBP4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 MUC3BQ9H195 1237 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 CHRDQ9H2X0 955 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 PRDM6Q9NQX0 595 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 NLRP2Q9NX02 1062 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 PPP4R2Q9NY27 417 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 KANSL3Q9P2N6 904 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 SALL4Q9UJQ4 1053 aa4.69□□□□□ -1.66
RNU6-428P-201ENST00000362942 ANKRD33BA6NCL7 494 aa4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 J3QW42 95 aa4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 EIF1AYO14602 144 aaKnown RBP4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 GNB5O14775 395 aa4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 EREGO14944 169 aa4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 CYP2E1P05181 493 aaPredicted RBP4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 MAPK8P45983 427 aa4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 DGKGP49619 791 aa4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 PERM1Q5SV97 790 aa4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 ALYREFQ86V81 257 aaKnown RBP4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 GALNT12Q8IXK2 581 aa4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 FBF1Q8TES7 1133 aa4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 NUDT8Q8WV74 236 aa4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 LPIN3Q9BQK8 851 aa4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 PBX4Q9BYU1 374 aa4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 ADAMTS8Q9UP79 889 aa4.68□□□□□ -1.66
RNU6-428P-201ENST00000362942 PNMA6FA0A0J9YX94 578 aa4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 EIF4EBP3O60516 100 aaPredicted RBP4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 ALBP02768 609 aa4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 PTPRAP18433 802 aa4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 MFAP1P55081 439 aaKnown RBP4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 CABP4P57796 275 aa4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 FMR1Q06787 632 aaKnown RBP eCLIP4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 ORC1Q13415 861 aa4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 DSC3Q14574 896 aa4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 ENOX2Q16206 610 aaKnown RBP4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 EAPPQ56P03 285 aaPredicted RBP4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 CEP135Q66GS9 1140 aa4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 C20orf204Q6ZNR8 217 aa4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 CEP120Q8N960 986 aa4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 TMEM102Q8N9M5 508 aaPredicted RBP4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 CCDC74AQ96AQ1 378 aa4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 FRMD6Q96NE9 622 aa4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 OSMRQ99650 979 aa4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 ZFYVE1Q9HBF4 777 aa4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 SRA1Q9HD15 236 aaKnown RBP4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 TRAK1Q9UPV9 953 aa4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 CCDC9Q9Y3X0 531 aaKnown RBP4.67□□□□□ -1.66
RNU6-428P-201ENST00000362942 GIPC1O14908 333 aa4.66□□□□□ -1.66
RNU6-428P-201ENST00000362942 GADD45BO75293 160 aaPredicted RBP4.66□□□□□ -1.66
RNU6-428P-201ENST00000362942 IGHA2P01877 340 aa4.66□□□□□ -1.66
RNU6-428P-201ENST00000362942 LORP23490 312 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms