RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 ATP13A2Q9NQ11 1180 aa7.7□□□□□ -1.18
RPL39-201ENST00000361575 PRKAG2Q9UGJ0 569 aa7.7□□□□□ -1.18
RPL39-201ENST00000361575 PCDHGC4Q9Y5F7 938 aa7.7□□□□□ -1.18
RPL39-201ENST00000361575 KHNYNO15037 678 aaKnown RBP7.69□□□□□ -1.18
RPL39-201ENST00000361575 BNIP3LO60238 219 aa7.69□□□□□ -1.18
RPL39-201ENST00000361575 MAPTP10636 758 aaKnown RBP7.69□□□□□ -1.18
RPL39-201ENST00000361575 DBN1Q16643 649 aa7.69□□□□□ -1.18
RPL39-201ENST00000361575 PRPF40BQ6NWY9 871 aaKnown RBP7.69□□□□□ -1.18
RPL39-201ENST00000361575 TCF12Q99081 682 aa7.69□□□□□ -1.18
RPL39-201ENST00000361575 SLC30A3Q99726 388 aa7.69□□□□□ -1.18
RPL39-201ENST00000361575 MAN1A2O60476 641 aa7.68□□□□□ -1.18
RPL39-201ENST00000361575 KIF4AO95239 1232 aa7.68□□□□□ -1.18
RPL39-201ENST00000361575 NFKB1P19838 968 aa7.68□□□□□ -1.18
RPL39-201ENST00000361575 GSTT1P30711 240 aa7.68□□□□□ -1.18
RPL39-201ENST00000361575 FIGNL1Q6PIW4 674 aa7.68□□□□□ -1.18
RPL39-201ENST00000361575 RIPOR1Q6ZS17 1223 aa7.68□□□□□ -1.18
RPL39-201ENST00000361575 TRIM56Q9BRZ2 755 aaKnown RBP7.68□□□□□ -1.18
RPL39-201ENST00000361575 NUCKS1Q9H1E3 243 aaKnown RBP7.68□□□□□ -1.18
RPL39-201ENST00000361575 EHD4Q9H223 541 aa7.68□□□□□ -1.18
RPL39-201ENST00000361575 AAASQ9NRG9 546 aa7.68□□□□□ -1.18
RPL39-201ENST00000361575 RARAP10276 462 aa7.67□□□□□ -1.18
RPL39-201ENST00000361575 HOXD8P13378 290 aaPredicted RBP7.67□□□□□ -1.18
RPL39-201ENST00000361575 EDN3P14138 238 aa7.67□□□□□ -1.18
RPL39-201ENST00000361575 GJA8P48165 433 aa7.67□□□□□ -1.18
RPL39-201ENST00000361575 PKDCCQ504Y2 493 aa7.67□□□□□ -1.18
RPL39-201ENST00000361575 RAB44Q7Z6P3 723 aaPredicted RBP7.67□□□□□ -1.18
RPL39-201ENST00000361575 DHX38Q92620 1227 aaKnown RBP7.67□□□□□ -1.18
RPL39-201ENST00000361575 ABHD17AQ96GS6 310 aa7.67□□□□□ -1.18
RPL39-201ENST00000361575 ZKSCAN3Q9BRR0 538 aa7.67□□□□□ -1.18
RPL39-201ENST00000361575 KBTBD4Q9NVX7 518 aa7.67□□□□□ -1.18
RPL39-201ENST00000361575 INPP5FQ9Y2H2 1132 aa7.67□□□□□ -1.18
RPL39-201ENST00000361575 NRG2O14511 850 aaPredicted RBP7.66□□□□□ -1.18
RPL39-201ENST00000361575 TRPA1O75762 1119 aa7.66□□□□□ -1.18
RPL39-201ENST00000361575 DNAJA1P31689 397 aaKnown RBP7.66□□□□□ -1.18
RPL39-201ENST00000361575 FCGRTP55899 365 aa7.66□□□□□ -1.18
RPL39-201ENST00000361575 SPEM2Q0P670 501 aa7.66□□□□□ -1.18
RPL39-201ENST00000361575 LAMC2Q13753 1193 aa7.66□□□□□ -1.18
RPL39-201ENST00000361575 TLR7Q9NYK1 1049 aaKnown RBP7.66□□□□□ -1.18
RPL39-201ENST00000361575 TMEM238LA0A1B0GVL6 79 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 F6X3S4 739 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 GFRA3O60609 400 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 MAP3K6O95382 1288 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 FGRP09769 529 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 CD33P20138 364 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 SOX18P35713 384 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 PAK2Q13177 524 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 MCF2L2Q86YR7 1114 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 CCNJLQ8IV13 435 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 TRIM22Q8IYM9 498 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 CCDC155Q8N6L0 562 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 CEP120Q8N960 986 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 ANKRD24Q8TF21 1146 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 ZNF837Q96EG3 531 aaPredicted RBP7.65□□□□□ -1.18
RPL39-201ENST00000361575 HHIPQ96QV1 700 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 DNAJC2Q99543 621 aaKnown RBP7.65□□□□□ -1.18
RPL39-201ENST00000361575 NOC4LQ9BVI4 516 aaKnown RBP7.65□□□□□ -1.18
RPL39-201ENST00000361575 OXCT2Q9BYC2 517 aaPredicted RBP7.65□□□□□ -1.18
RPL39-201ENST00000361575 LIN7BQ9HAP6 207 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 MARK1Q9P0L2 795 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 TTF2Q9UNY4 1162 aaKnown RBP7.65□□□□□ -1.18
RPL39-201ENST00000361575 TRAK1Q9UPV9 953 aa7.65□□□□□ -1.18
RPL39-201ENST00000361575 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.65□□□□□ -1.18
RPL39-201ENST00000361575 PHF20L1A8MW92 1017 aa7.64□□□□□ -1.19
RPL39-201ENST00000361575 NFKBIEO00221 500 aa7.64□□□□□ -1.19
RPL39-201ENST00000361575 FBXO24O75426 580 aa7.64□□□□□ -1.19
RPL39-201ENST00000361575 GRIA4P48058 902 aa7.64□□□□□ -1.19
RPL39-201ENST00000361575 RSRP1Q9BUV0 290 aa7.64□□□□□ -1.19
RPL39-201ENST00000361575 ADAMTS1Q9UHI8 967 aa7.64□□□□□ -1.19
RPL39-201ENST00000361575 METTL12A8MUP2 240 aa7.63□□□□□ -1.19
RPL39-201ENST00000361575 ZBTB42B2RXF5 422 aa7.63□□□□□ -1.19
RPL39-201ENST00000361575 ARID5AQ03989 594 aa7.63□□□□□ -1.19
RPL39-201ENST00000361575 DHX32Q7L7V1 743 aaKnown RBP7.63□□□□□ -1.19
RPL39-201ENST00000361575 DPH6Q7L8W6 267 aa7.63□□□□□ -1.19
RPL39-201ENST00000361575 FAM177A1Q8N128 213 aaPredicted RBP7.63□□□□□ -1.19
RPL39-201ENST00000361575 BHMTQ93088 406 aa7.63□□□□□ -1.19
RPL39-201ENST00000361575 OSMRQ99650 979 aa7.63□□□□□ -1.19
RPL39-201ENST00000361575 DZANK1Q9NVP4 752 aa7.63□□□□□ -1.19
RPL39-201ENST00000361575 PSAPP07602 524 aa7.62□□□□□ -1.19
RPL39-201ENST00000361575 ATF4P18848 351 aaPredicted RBP7.62□□□□□ -1.19
RPL39-201ENST00000361575 ATP2B1P20020 1258 aa7.62□□□□□ -1.19
RPL39-201ENST00000361575 GNL2Q13823 731 aaKnown RBP7.62□□□□□ -1.19
RPL39-201ENST00000361575 CCDC85BQ15834 202 aaPredicted RBP7.62□□□□□ -1.19
RPL39-201ENST00000361575 SPRED3Q2MJR0 410 aa7.62□□□□□ -1.19
RPL39-201ENST00000361575 NSUN5Q96P11 429 aaKnown RBP7.62□□□□□ -1.19
RPL39-201ENST00000361575 LNPKQ9C0E8 428 aa7.62□□□□□ -1.19
RPL39-201ENST00000361575 PPM1HQ9ULR3 514 aa7.62□□□□□ -1.19
RPL39-201ENST00000361575 H7C1W4 665 aa7.61□□□□□ -1.19
RPL39-201ENST00000361575 CELA3AP09093 270 aa7.61□□□□□ -1.19
RPL39-201ENST00000361575 ITGA6P23229 1130 aa7.61□□□□□ -1.19
RPL39-201ENST00000361575 ITPKAP23677 461 aa7.61□□□□□ -1.19
RPL39-201ENST00000361575 GTF2F1P35269 517 aaKnown RBP eCLIP7.61□□□□□ -1.19
RPL39-201ENST00000361575 PLAURQ03405 335 aa7.61□□□□□ -1.19
RPL39-201ENST00000361575 HYAL2Q12891 473 aa7.61□□□□□ -1.19
RPL39-201ENST00000361575 NCAPG2Q86XI2 1143 aa7.61□□□□□ -1.19
RPL39-201ENST00000361575 RASGRP4Q8TDF6 673 aa7.61□□□□□ -1.19
RPL39-201ENST00000361575 GTPBP3Q969Y2 492 aaKnown RBP7.61□□□□□ -1.19
RPL39-201ENST00000361575 ARMC5Q96C12 935 aa7.61□□□□□ -1.19
RPL39-201ENST00000361575 GPRASP2Q96D09 838 aa7.61□□□□□ -1.19
RPL39-201ENST00000361575 RHOVQ96L33 236 aa7.61□□□□□ -1.19
RPL39-201ENST00000361575 PNMA5Q96PV4 448 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms