RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 USP25Q9UHP3 1055 aa23.16■■□□□ 1.3
SMURF1-202ENST00000361368 CTR9Q6PD62 1173 aa23.16■■□□□ 1.3
SMURF1-202ENST00000361368 TPTE2Q6XPS3 522 aa23.16■■□□□ 1.3
SMURF1-202ENST00000361368 C16orf71Q8IYS4 520 aaPredicted RBP23.16■■□□□ 1.3
SMURF1-202ENST00000361368 NIP7Q9Y221 180 aaKnown RBP eCLIP23.15■■□□□ 1.3
SMURF1-202ENST00000361368 PARP3Q9Y6F1 533 aa23.15■■□□□ 1.3
SMURF1-202ENST00000361368 MRPS9P82933 396 aaKnown RBP23.15■■□□□ 1.3
SMURF1-202ENST00000361368 GIMAP7Q8NHV1 300 aa23.15■■□□□ 1.3
SMURF1-202ENST00000361368 XAGE3Q8WTP9 111 aa23.15■■□□□ 1.3
SMURF1-202ENST00000361368 RTL9Q8NET4 1388 aa23.15■■□□□ 1.3
SMURF1-202ENST00000361368 BRF1Q92994 677 aa23.15■■□□□ 1.3
SMURF1-202ENST00000361368 TRMT1Q9NXH9 659 aaKnown RBP23.15■■□□□ 1.3
SMURF1-202ENST00000361368 SNW1Q13573 536 aaKnown RBP23.14■■□□□ 1.3
SMURF1-202ENST00000361368 MCMDC2Q4G0Z9 681 aa23.14■■□□□ 1.3
SMURF1-202ENST00000361368 AKAP4Q5JQC9 854 aa23.14■■□□□ 1.3
SMURF1-202ENST00000361368 RNF187Q5TA31 235 aaPredicted RBP23.14■■□□□ 1.3
SMURF1-202ENST00000361368 TNPO1Q92973 898 aaKnown RBP23.14■■□□□ 1.3
SMURF1-202ENST00000361368 ZC3H12CQ9C0D7 883 aaKnown RBP23.14■■□□□ 1.3
SMURF1-202ENST00000361368 RASAL2Q9UJF2 1139 aa23.14■■□□□ 1.3
SMURF1-202ENST00000361368 CALML3P27482 149 aa23.14■■□□□ 1.3
SMURF1-202ENST00000361368 PICALMQ13492 652 aa23.14■■□□□ 1.3
SMURF1-202ENST00000361368 SPDYE3A6NKU9 549 aa23.14■■□□□ 1.29
SMURF1-202ENST00000361368 PSMA7O14818 248 aa23.14■■□□□ 1.29
SMURF1-202ENST00000361368 SELENOOQ9BVL4 669 aa23.14■■□□□ 1.29
SMURF1-202ENST00000361368 F8W031 263 aaPredicted RBP23.14■■□□□ 1.29
SMURF1-202ENST00000361368 TCHPQ9BT92 498 aa23.14■■□□□ 1.29
SMURF1-202ENST00000361368 MSANTD4Q8NCY6 345 aa23.13■■□□□ 1.29
SMURF1-202ENST00000361368 MAGEB6P1A0A0J9YX57 407 aa23.13■■□□□ 1.29
SMURF1-202ENST00000361368 LRSAM1Q6UWE0 723 aa23.13■■□□□ 1.29
SMURF1-202ENST00000361368 ANKRD2Q9GZV1 360 aa23.13■■□□□ 1.29
SMURF1-202ENST00000361368 IQCGQ9H095 443 aaKnown RBP23.13■■□□□ 1.29
SMURF1-202ENST00000361368 RRP36Q96EU6 259 aaKnown RBP23.12■■□□□ 1.29
SMURF1-202ENST00000361368 RAB11FIP4Q86YS3 637 aa23.12■■□□□ 1.29
SMURF1-202ENST00000361368 CHPF2Q9P2E5 772 aa23.12■■□□□ 1.29
SMURF1-202ENST00000361368 KSR2Q6VAB6 950 aa23.12■■□□□ 1.29
SMURF1-202ENST00000361368 COPS6Q7L5N1 327 aa23.12■■□□□ 1.29
SMURF1-202ENST00000361368 CCDC77Q9BR77 488 aa23.12■■□□□ 1.29
SMURF1-202ENST00000361368 APBB1IPQ7Z5R6 666 aaPredicted RBP23.12■■□□□ 1.29
SMURF1-202ENST00000361368 LMBR1Q8WVP7 490 aa23.12■■□□□ 1.29
SMURF1-202ENST00000361368 LARP6Q9BRS8 491 aaKnown RBP23.12■■□□□ 1.29
SMURF1-202ENST00000361368 GRM8O00222 908 aa23.11■■□□□ 1.29
SMURF1-202ENST00000361368 ACSBG1Q96GR2 724 aa23.11■■□□□ 1.29
SMURF1-202ENST00000361368 VEZTQ9HBM0 779 aa23.11■■□□□ 1.29
SMURF1-202ENST00000361368 RTCBQ9Y3I0 505 aaKnown RBP23.11■■□□□ 1.29
SMURF1-202ENST00000361368 SLC9C2Q5TAH2 1124 aa23.1■■□□□ 1.29
SMURF1-202ENST00000361368 KRT79Q5XKE5 535 aa23.1■■□□□ 1.29
SMURF1-202ENST00000361368 WDR97A6NE52 1622 aa23.1■■□□□ 1.29
SMURF1-202ENST00000361368 ATP2A1O14983 1001 aa23.1■■□□□ 1.29
SMURF1-202ENST00000361368 TNNI2P48788 182 aa23.1■■□□□ 1.29
SMURF1-202ENST00000361368 NAP1L4Q99733 375 aaKnown RBP23.1■■□□□ 1.29
SMURF1-202ENST00000361368 MRVI1Q9Y6F6 885 aa23.1■■□□□ 1.29
SMURF1-202ENST00000361368 A0A1W2PRG0 241 aa23.1■■□□□ 1.29
SMURF1-202ENST00000361368 ASIC1P78348 528 aa23.1■■□□□ 1.29
SMURF1-202ENST00000361368 HSF2BPO75031 334 aa23.1■■□□□ 1.29
SMURF1-202ENST00000361368 TBC1D2Q9BYX2 928 aa23.1■■□□□ 1.29
SMURF1-202ENST00000361368 TMX1Q9H3N1 280 aa23.1■■□□□ 1.29
SMURF1-202ENST00000361368 ZSCAN22P10073 491 aaPredicted RBP23.09■■□□□ 1.29
SMURF1-202ENST00000361368 LMBR1LQ6UX01 489 aa23.09■■□□□ 1.29
SMURF1-202ENST00000361368 C16orf45Q96MC5 204 aaPredicted RBP23.09■■□□□ 1.29
SMURF1-202ENST00000361368 C20orf194Q5TEA3 1177 aa23.09■■□□□ 1.29
SMURF1-202ENST00000361368 PLS1Q14651 629 aa23.09■■□□□ 1.29
SMURF1-202ENST00000361368 RAB3IL1Q8TBN0 382 aa23.09■■□□□ 1.29
SMURF1-202ENST00000361368 FANCAO15360 1455 aa23.09■■□□□ 1.29
SMURF1-202ENST00000361368 RRP9O43818 475 aaKnown RBP23.09■■□□□ 1.29
SMURF1-202ENST00000361368 ADCY5O95622 1261 aa23.09■■□□□ 1.29
SMURF1-202ENST00000361368 FAM83GA6ND36 823 aa23.08■■□□□ 1.29
SMURF1-202ENST00000361368 GNG11P61952 73 aa23.08■■□□□ 1.29
SMURF1-202ENST00000361368 DZIP3Q86Y13 1208 aaKnown RBP23.08■■□□□ 1.29
SMURF1-202ENST00000361368 IL2RBP14784 551 aa23.08■■□□□ 1.29
SMURF1-202ENST00000361368 LMOD1P29536 600 aaPredicted RBP23.08■■□□□ 1.29
SMURF1-202ENST00000361368 AFMP43652 599 aa23.08■■□□□ 1.29
SMURF1-202ENST00000361368 UBASH3AP57075 661 aa23.08■■□□□ 1.29
SMURF1-202ENST00000361368 JARID2Q92833 1246 aaPredicted RBP23.08■■□□□ 1.29
SMURF1-202ENST00000361368 SH2D4AQ9H788 454 aa23.08■■□□□ 1.29
SMURF1-202ENST00000361368 GRM1Q13255 1194 aa23.08■■□□□ 1.29
SMURF1-202ENST00000361368 MRPS27Q92552 414 aaKnown RBP23.08■■□□□ 1.29
SMURF1-202ENST00000361368 RALGAPBQ86X10 1494 aa23.08■■□□□ 1.29
SMURF1-202ENST00000361368 PTPN23Q9H3S7 1636 aa23.08■■□□□ 1.29
SMURF1-202ENST00000361368 FAM13AO94988 1023 aa23.08■■□□□ 1.28
SMURF1-202ENST00000361368 HS2ST1Q7LGA3 356 aa23.07■■□□□ 1.28
SMURF1-202ENST00000361368 C8orf37Q96NL8 207 aa23.07■■□□□ 1.28
SMURF1-202ENST00000361368 ABCA10Q8WWZ4 1543 aa23.07■■□□□ 1.28
SMURF1-202ENST00000361368 TRIM75PA6NK02 468 aa23.07■■□□□ 1.28
SMURF1-202ENST00000361368 GNA11P29992 359 aa23.07■■□□□ 1.28
SMURF1-202ENST00000361368 ISM2Q6H9L7 571 aa23.07■■□□□ 1.28
SMURF1-202ENST00000361368 TFCP2L1Q9NZI6 479 aa23.07■■□□□ 1.28
SMURF1-202ENST00000361368 STMN4Q9H169 189 aaPredicted RBP23.06■■□□□ 1.28
SMURF1-202ENST00000361368 GDPD2Q9HCC8 539 aa23.06■■□□□ 1.28
SMURF1-202ENST00000361368 KIAA1524Q8TCG1 905 aa23.06■■□□□ 1.28
SMURF1-202ENST00000361368 IQSEC3Q9UPP2 1182 aaPredicted RBP23.06■■□□□ 1.28
SMURF1-202ENST00000361368 CCDC171Q6TFL3 1326 aa23.06■■□□□ 1.28
SMURF1-202ENST00000361368 BICDL2A1A5D9 508 aa23.06■■□□□ 1.28
SMURF1-202ENST00000361368 ANXA1P04083 346 aa23.06■■□□□ 1.28
SMURF1-202ENST00000361368 CCDC117Q8IWD4 279 aaPredicted RBP23.06■■□□□ 1.28
SMURF1-202ENST00000361368 OTUD6BQ8N6M0 293 aa23.06■■□□□ 1.28
SMURF1-202ENST00000361368 SIRT1Q96EB6 747 aa23.06■■□□□ 1.28
SMURF1-202ENST00000361368 CEP83Q9Y592 693 aa23.06■■□□□ 1.28
SMURF1-202ENST00000361368 PAXBP1Q9Y5B6 917 aa23.06■■□□□ 1.28
SMURF1-202ENST00000361368 RBM8AQ9Y5S9 174 aaKnown RBP23.06■■□□□ 1.28
SMURF1-202ENST00000361368 FMNL3Q8IVF7 1028 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms