RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 CCDC24Q8N4L8 307 aa16.33■□□□□ 0.21
PCMTD1-201ENST00000360540 ZSWIM4Q9H7M6 989 aa16.33■□□□□ 0.21
PCMTD1-201ENST00000360540 PREX2Q70Z35 1606 aa16.33■□□□□ 0.21
PCMTD1-201ENST00000360540 CCDC196A0A1B0GTZ2 297 aa16.33■□□□□ 0.21
PCMTD1-201ENST00000360540 A0A1B0GVL5 298 aa16.33■□□□□ 0.21
PCMTD1-201ENST00000360540 PTGS1P23219 599 aa16.33■□□□□ 0.21
PCMTD1-201ENST00000360540 NLRP5P59047 1200 aa16.33■□□□□ 0.21
PCMTD1-201ENST00000360540 DHX32Q7L7V1 743 aaKnown RBP16.33■□□□□ 0.21
PCMTD1-201ENST00000360540 SSH3Q8TE77 659 aa16.33■□□□□ 0.21
PCMTD1-201ENST00000360540 SLC4A4Q9Y6R1 1079 aa16.33■□□□□ 0.21
PCMTD1-201ENST00000360540 MPHOSPH10O00566 681 aaKnown RBP16.33■□□□□ 0.2
PCMTD1-201ENST00000360540 ZSCAN16Q9H4T2 348 aaPredicted RBP16.33■□□□□ 0.2
PCMTD1-201ENST00000360540 CBFA2T2O43439 604 aa16.33■□□□□ 0.2
PCMTD1-201ENST00000360540 AFMP43652 599 aa16.33■□□□□ 0.2
PCMTD1-201ENST00000360540 DZIP3Q86Y13 1208 aaKnown RBP16.33■□□□□ 0.2
PCMTD1-201ENST00000360540 DACH1Q9UI36 760 aa16.33■□□□□ 0.2
PCMTD1-201ENST00000360540 A0A0D9SFI3 127 aa16.32■□□□□ 0.2
PCMTD1-201ENST00000360540 TSPY2A6NKD2 308 aa16.32■□□□□ 0.2
PCMTD1-201ENST00000360540 ENOX2Q16206 610 aaKnown RBP16.32■□□□□ 0.2
PCMTD1-201ENST00000360540 UBXN4Q92575 508 aa16.32■□□□□ 0.2
PCMTD1-201ENST00000360540 RNF113AO15541 343 aaKnown RBP16.32■□□□□ 0.2
PCMTD1-201ENST00000360540 ZNF853P0CG23 659 aa16.32■□□□□ 0.2
PCMTD1-201ENST00000360540 HSPA4P34932 840 aa16.32■□□□□ 0.2
PCMTD1-201ENST00000360540 SYKP43405 635 aa16.32■□□□□ 0.2
PCMTD1-201ENST00000360540 CDC37L1Q7L3B6 337 aa16.32■□□□□ 0.2
PCMTD1-201ENST00000360540 TRMT1LQ7Z2T5 733 aaKnown RBP16.32■□□□□ 0.2
PCMTD1-201ENST00000360540 ANTXR1Q9H6X2 564 aa16.32■□□□□ 0.2
PCMTD1-201ENST00000360540 SLC52A2Q9HAB3 445 aa16.32■□□□□ 0.2
PCMTD1-201ENST00000360540 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.32■□□□□ 0.2
PCMTD1-201ENST00000360540 SYNMO15061 1565 aa16.32■□□□□ 0.2
PCMTD1-201ENST00000360540 CTAGE5O15320 804 aa16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 EIF5P55010 431 aaKnown RBP16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 DNAJC10Q8IXB1 793 aa16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 TEX13AQ9BXU3 409 aaPredicted RBP16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 DEF6Q9H4E7 631 aa16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 BTG4Q9NY30 223 aa16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 KIAA0232Q92628 1395 aa16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 C6orf229H3BNL8 230 aa16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 ARHGAP29Q52LW3 1261 aa16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 BEND3Q5T5X7 828 aa16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 WTAPQ15007 396 aa16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 ADCK5Q3MIX3 580 aa16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 TTLL7Q6ZT98 887 aa16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 KIF18AQ8NI77 898 aa16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 TLR7Q9NYK1 1049 aaKnown RBP16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 ME3Q16798 604 aa16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 CATIPQ7Z7H3 387 aa16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 ZNHIT6Q9NWK9 470 aaKnown RBP16.31■□□□□ 0.2
PCMTD1-201ENST00000360540 RPS6KB1P23443 525 aa16.3■□□□□ 0.2
PCMTD1-201ENST00000360540 DNA2P51530 1060 aa16.3■□□□□ 0.2
PCMTD1-201ENST00000360540 STIM1Q13586 685 aa16.3■□□□□ 0.2
PCMTD1-201ENST00000360540 TTF1Q15361 905 aaPredicted RBP16.3■□□□□ 0.2
PCMTD1-201ENST00000360540 MAGEB6Q8N7X4 407 aa16.3■□□□□ 0.2
PCMTD1-201ENST00000360540 MRPS27Q92552 414 aaKnown RBP16.3■□□□□ 0.2
PCMTD1-201ENST00000360540 ERICH4A6NGS2 130 aa16.3■□□□□ 0.2
PCMTD1-201ENST00000360540 EYA2O00167 538 aa16.3■□□□□ 0.2
PCMTD1-201ENST00000360540 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
PCMTD1-201ENST00000360540 ZNF444Q8N0Y2 327 aaPredicted RBP16.3■□□□□ 0.2
PCMTD1-201ENST00000360540 MYL10Q9BUA6 226 aa16.3■□□□□ 0.2
PCMTD1-201ENST00000360540 SETD1BQ9UPS6 1966 aaKnown RBP16.3■□□□□ 0.2
PCMTD1-201ENST00000360540 TAF5LO75529 589 aa16.3■□□□□ 0.2
PCMTD1-201ENST00000360540 SKILP12757 684 aa16.3■□□□□ 0.2
PCMTD1-201ENST00000360540 EPB41L2O43491 1005 aaKnown RBP16.29■□□□□ 0.2
PCMTD1-201ENST00000360540 CCDC102BQ68D86 513 aa16.29■□□□□ 0.2
PCMTD1-201ENST00000360540 B4E1Z4 1266 aa16.29■□□□□ 0.2
PCMTD1-201ENST00000360540 CDC5LQ99459 802 aaKnown RBP16.29■□□□□ 0.2
PCMTD1-201ENST00000360540 RNF41Q9H4P4 317 aaPredicted RBP16.29■□□□□ 0.2
PCMTD1-201ENST00000360540 NEURL1BA8MQ27 555 aa16.29■□□□□ 0.2
PCMTD1-201ENST00000360540 ZFYP08048 801 aaPredicted RBP16.28■□□□□ 0.2
PCMTD1-201ENST00000360540 UVSSAQ2YD98 709 aa16.28■□□□□ 0.2
PCMTD1-201ENST00000360540 SPTLC2O15270 562 aa16.28■□□□□ 0.2
PCMTD1-201ENST00000360540 BRD1O95696 1058 aa16.28■□□□□ 0.2
PCMTD1-201ENST00000360540 RUFY1Q96T51 708 aa16.28■□□□□ 0.2
PCMTD1-201ENST00000360540 PRDM1O75626 825 aa16.28■□□□□ 0.2
PCMTD1-201ENST00000360540 NBPF5PQ86XG9 351 aaPredicted RBP16.28■□□□□ 0.2
PCMTD1-201ENST00000360540 PLBD2Q8NHP8 589 aa16.28■□□□□ 0.2
PCMTD1-201ENST00000360540 CEP131Q9UPN4 1083 aa16.28■□□□□ 0.2
PCMTD1-201ENST00000360540 MYOM2P54296 1465 aa16.28■□□□□ 0.2
PCMTD1-201ENST00000360540 CCDC194A0A1B0GVG4 234 aa16.28■□□□□ 0.2
PCMTD1-201ENST00000360540 CCP110O43303 1012 aa16.27■□□□□ 0.2
PCMTD1-201ENST00000360540 FAM193AP78312 1265 aa16.27■□□□□ 0.2
PCMTD1-201ENST00000360540 GPT2Q8TD30 523 aa16.27■□□□□ 0.2
PCMTD1-201ENST00000360540 F8W031 263 aaPredicted RBP16.27■□□□□ 0.2
PCMTD1-201ENST00000360540 ITGA6P23229 1130 aa16.27■□□□□ 0.2
PCMTD1-201ENST00000360540 XAGE2Q96GT9 111 aa16.27■□□□□ 0.2
PCMTD1-201ENST00000360540 DDB1Q16531 1140 aa16.27■□□□□ 0.19
PCMTD1-201ENST00000360540 RTN1Q16799 776 aa16.27■□□□□ 0.19
PCMTD1-201ENST00000360540 WWC3Q9ULE0 1092 aa16.27■□□□□ 0.19
PCMTD1-201ENST00000360540 ZCCHC11Q5TAX3 1644 aaKnown RBP16.27■□□□□ 0.19
PCMTD1-201ENST00000360540 PLXNC1O60486 1568 aa16.27■□□□□ 0.19
PCMTD1-201ENST00000360540 HOXB7P09629 217 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 IDEP14735 1019 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 CCDC152Q4G0S7 254 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 SPECC1Q5M775 1068 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 LRRIQ1Q96JM4 1722 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 STX17P56962 302 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 ZFYVE27Q5T4F4 411 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 TSC1Q92574 1164 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 ZFYVE16Q7Z3T8 1539 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 TRPM1Q7Z4N2 1603 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms