RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 ITIH6Q6UXX5 1313 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 SH3TC1Q8TE82 1336 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 CCDC151A5D8V7 595 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 EPB41P11171 864 aaKnown RBP5.32□□□□□ -1.56
PTPN22-201ENST00000359785 RESTQ13127 1097 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 MKRN4PQ13434 485 aaPredicted RBP5.32□□□□□ -1.56
PTPN22-201ENST00000359785 FOXR2Q6PJQ5 311 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 ITPRIPQ8IWB1 547 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 DHX40Q8IX18 779 aaKnown RBP5.32□□□□□ -1.56
PTPN22-201ENST00000359785 RABGGTAQ92696 567 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 MYH8P13535 1937 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 SEMA3EO15041 775 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 PNMA6AP0CW24 399 aaPredicted RBP5.32□□□□□ -1.56
PTPN22-201ENST00000359785 CORO7P57737 925 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 MAP3K9P80192 1104 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 BRAPQ7Z569 592 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 KIFC2Q96AC6 838 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 FAM13BQ9NYF5 915 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 TUBE1Q9UJT0 475 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 DOT1LQ8TEK3 1739 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 QSER1Q2KHR3 1735 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 TARSL2A2RTX5 802 aaKnown RBP5.32□□□□□ -1.56
PTPN22-201ENST00000359785 PRPF40AO75400 957 aaKnown RBP5.32□□□□□ -1.56
PTPN22-201ENST00000359785 RAD51AP2Q09MP3 1159 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 FBXO38Q6PIJ6 1188 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 FILIP1Q7Z7B0 1213 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 BCCIPQ9P287 314 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPN22-201ENST00000359785 SNX14Q9Y5W7 946 aa5.32□□□□□ -1.56
PTPN22-201ENST00000359785 COL1A1P02452 1464 aaPredicted RBP5.31□□□□□ -1.56
PTPN22-201ENST00000359785 TYRO3Q06418 890 aa5.31□□□□□ -1.56
PTPN22-201ENST00000359785 DRP2Q13474 957 aa5.31□□□□□ -1.56
PTPN22-201ENST00000359785 RUFY3Q7L099 469 aa5.31□□□□□ -1.56
PTPN22-201ENST00000359785 MICALL1Q8N3F8 863 aa5.31□□□□□ -1.56
PTPN22-201ENST00000359785 TBC1D22AQ8WUA7 517 aa5.31□□□□□ -1.56
PTPN22-201ENST00000359785 RAI14Q9P0K7 980 aa5.31□□□□□ -1.56
PTPN22-201ENST00000359785 PDLIM1O00151 329 aa5.31□□□□□ -1.56
PTPN22-201ENST00000359785 RAPGEF3O95398 923 aa5.31□□□□□ -1.56
PTPN22-201ENST00000359785 TBC1D8O95759 1140 aa5.31□□□□□ -1.56
PTPN22-201ENST00000359785 GNAI3P08754 354 aa5.31□□□□□ -1.56
PTPN22-201ENST00000359785 CASQ1P31415 396 aa5.31□□□□□ -1.56
PTPN22-201ENST00000359785 SNW1Q13573 536 aaKnown RBP5.31□□□□□ -1.56
PTPN22-201ENST00000359785 MAP3K11Q16584 847 aa5.31□□□□□ -1.56
PTPN22-201ENST00000359785 APLFQ8IW19 511 aaPredicted RBP5.31□□□□□ -1.56
PTPN22-201ENST00000359785 MAP4K1Q92918 833 aa5.31□□□□□ -1.56
PTPN22-201ENST00000359785 ALDH1L1O75891 902 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 KIAA0753Q2KHM9 967 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 LRRFIP1Q32MZ4 808 aaKnown RBP5.3□□□□□ -1.56
PTPN22-201ENST00000359785 NBPF20Q3BBV1 942 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 ICE2Q659A1 982 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 CEP135Q66GS9 1140 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 MNS1Q8NEH6 495 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 SLC26A8Q96RN1 970 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 MTA3Q9BTC8 594 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 NAA15Q9BXJ9 866 aaKnown RBP5.3□□□□□ -1.56
PTPN22-201ENST00000359785 KDM2AQ9Y2K7 1162 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 GREB1LQ9C091 1923 aaPredicted RBP5.3□□□□□ -1.56
PTPN22-201ENST00000359785 COL5A3P25940 1745 aaPredicted RBP5.3□□□□□ -1.56
PTPN22-201ENST00000359785 CLGNO14967 610 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 SYT1P21579 422 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 RCAN1P53805 252 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 STX1AQ16623 288 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 TWISTNBQ3B726 338 aaPredicted RBP5.3□□□□□ -1.56
PTPN22-201ENST00000359785 WLSQ5T9L3 541 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 ARHGAP27Q6ZUM4 889 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 EFCAB13Q8IY85 973 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 SPATA20Q8TB22 786 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 BBXQ8WY36 941 aaPredicted RBP5.3□□□□□ -1.56
PTPN22-201ENST00000359785 RBM42Q9BTD8 480 aaKnown RBP5.3□□□□□ -1.56
PTPN22-201ENST00000359785 HSD3B7Q9H2F3 369 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 CBX8Q9HC52 389 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 DONSONQ9NYP3 566 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 CWC15Q9P013 229 aaKnown RBP5.3□□□□□ -1.56
PTPN22-201ENST00000359785 MRFAP1Q9Y605 127 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 CDK5RAP2Q96SN8 1893 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 U2AF2P26368 475 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTPN22-201ENST00000359785 CNPY4Q8N129 248 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 ZNF830Q96NB3 372 aaPredicted RBP5.3□□□□□ -1.56
PTPN22-201ENST00000359785 FUT8Q9BYC5 575 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 LNPKQ9C0E8 428 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 RBM27Q9P2N5 1060 aaKnown RBP5.3□□□□□ -1.56
PTPN22-201ENST00000359785 HPSEQ9Y251 543 aa5.3□□□□□ -1.56
PTPN22-201ENST00000359785 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTPN22-201ENST00000359785 ZNF536O15090 1300 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 CCDC196A0A1B0GTZ2 297 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 ARID3CA6NKF2 412 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 NEFHP12036 1026 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 ATP2B1P20020 1258 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 PBX1P40424 430 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 ICA1Q05084 483 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 HSP90AB4PQ58FF6 505 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 E4F1Q66K89 784 aaPredicted RBP5.29□□□□□ -1.56
PTPN22-201ENST00000359785 MKL1Q969V6 931 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 ANKRD27Q96NW4 1050 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 SH3GL2Q99962 352 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 PARP3Q9Y6F1 533 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 STRCP1A6NGW2 1772 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 GADD45BO75293 160 aaPredicted RBP5.29□□□□□ -1.56
PTPN22-201ENST00000359785 NT5C2P49902 561 aa5.29□□□□□ -1.56
PTPN22-201ENST00000359785 MRPL12P52815 198 aaKnown RBP5.29□□□□□ -1.56
PTPN22-201ENST00000359785 SKOR1P84550 965 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms