RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 ME1P48163 572 aa11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 NAA16Q6N069 864 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 CREBRFQ8IUR6 639 aa11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 FSIP1Q8NA03 581 aa11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 FBXW7Q969H0 707 aa11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 SUCLG2Q96I99 432 aa11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 BICC1Q9H694 974 aaKnown RBP11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 IMPACTQ9P2X3 320 aa11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 RGPD8O14715 1765 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 A0A087WWV3 80 aa11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 GRM8O00222 908 aa11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 USPL1Q5W0Q7 1092 aa11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 TIGD1Q96MW7 591 aa11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 LLPHQ9BRT6 129 aaKnown RBP11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 FTOQ9C0B1 505 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 U3KPZ7 1027 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 TNRQ92752 1358 aa11.61□□□□□ -0.55
TRAPPC2-201ENST00000359680 CDK11BP21127 795 aaKnown RBP11.6□□□□□ -0.55
TRAPPC2-201ENST00000359680 SCRN1Q12765 414 aa11.6□□□□□ -0.55
TRAPPC2-201ENST00000359680 CCDC150Q8NCX0 1101 aa11.6□□□□□ -0.55
TRAPPC2-201ENST00000359680 OSBPL5Q9H0X9 879 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC2-201ENST00000359680 CALCOCO1Q9P1Z2 691 aa11.6□□□□□ -0.55
TRAPPC2-201ENST00000359680 MED1Q15648 1581 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC2-201ENST00000359680 ADD1P35611 737 aaKnown RBP11.6□□□□□ -0.55
TRAPPC2-201ENST00000359680 ERCC6LQ2NKX8 1250 aa11.6□□□□□ -0.55
TRAPPC2-201ENST00000359680 ATL3Q6DD88 541 aa11.6□□□□□ -0.55
TRAPPC2-201ENST00000359680 SMARCC2Q8TAQ2 1214 aa11.6□□□□□ -0.55
TRAPPC2-201ENST00000359680 USP28Q96RU2 1077 aa11.6□□□□□ -0.55
TRAPPC2-201ENST00000359680 SDF4Q9BRK5 362 aa11.6□□□□□ -0.55
TRAPPC2-201ENST00000359680 NOL10Q9BSC4 688 aaKnown RBP11.6□□□□□ -0.55
TRAPPC2-201ENST00000359680 ERBB3P21860 1342 aa11.6□□□□□ -0.55
TRAPPC2-201ENST00000359680 SMC2O95347 1197 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 SFPQP23246 707 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 SYT10Q6XYQ8 523 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 ABTB2Q8N961 1025 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 LINS1Q8NG48 757 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 SLC26A8Q96RN1 970 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 LRRC2Q9BYS8 371 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 UBR1Q8IWV7 1749 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 DHX8Q14562 1220 aaKnown RBP11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 TMC6Q7Z403 805 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 ENGASEQ8NFI3 743 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 EDC3Q96F86 508 aaKnown RBP11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 PPP1R13BQ96KQ4 1090 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 L2HGDHQ9H9P8 463 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 ST7Q9NRC1 585 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 ZNF446Q9NWS9 450 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 PLEKHG1Q9ULL1 1385 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 PTPDC1A2A3K4 754 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 PSDA5PKW4 1024 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 PFKFB2O60825 505 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 DDX58O95786 925 aaKnown RBP11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 H2AFXP16104 143 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 TPM4P67936 248 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 PROSER3Q2NL68 480 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 E4F1Q66K89 784 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 NBPF11Q86T75 865 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 C14orf37Q86TY3 774 aa11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 NSUN7Q8NE18 718 aaKnown RBP11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 MRPS27Q92552 414 aaKnown RBP11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 ERCC4Q92889 916 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC2-201ENST00000359680 TUBB4AP04350 444 aa11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 HMGB1P09429 215 aaKnown RBP11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 ZNF530Q6P9A1 599 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 HOMER1Q86YM7 354 aa11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 KAZALD1Q96I82 304 aa11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 TMEM51Q9NW97 253 aa11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 ARGLU1Q9NWB6 273 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 NAP1L2Q9ULW6 460 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 AMOTL2Q9Y2J4 779 aa11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 SLIT1O75093 1534 aa11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 TSPOAP1O95153 1857 aa11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 CYP21A2P08686 494 aa11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 FAM69CQ0P6D2 419 aa11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 KLHDC4Q8TBB5 520 aa11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 XPO4Q9C0E2 1151 aaKnown RBP11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 IFNKQ9P0W0 207 aa11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 DIP2AQ14689 1571 aa11.58□□□□□ -0.56
TRAPPC2-201ENST00000359680 SETD1BQ9UPS6 1966 aaKnown RBP11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 GTF2E1P29083 439 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 CLCN6P51797 869 aa11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 ARHGAP29Q52LW3 1261 aa11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 AKAP4Q5JQC9 854 aa11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 MPRIPQ6WCQ1 1025 aa11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 CCDC129Q6ZRS4 1044 aa11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 COL15A1P39059 1388 aa11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 UTYO14607 1347 aa11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 CCP110O43303 1012 aa11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 ATP5JP18859 108 aa11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 LTKP29376 864 aa11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 KCNJ6P48051 423 aa11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 AIMP1Q12904 312 aaKnown RBP11.57□□□□□ -0.56
TRAPPC2-201ENST00000359680 CCT2P78371 535 aaKnown RBP11.56□□□□□ -0.56
TRAPPC2-201ENST00000359680 GUCY1B3Q02153 619 aa11.56□□□□□ -0.56
TRAPPC2-201ENST00000359680 APOBRQ0VD83 1088 aa11.56□□□□□ -0.56
TRAPPC2-201ENST00000359680 SF3A1Q15459 793 aaKnown RBP11.56□□□□□ -0.56
TRAPPC2-201ENST00000359680 MCMDC2Q4G0Z9 681 aa11.56□□□□□ -0.56
TRAPPC2-201ENST00000359680 GORABQ5T7V8 394 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms