RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 MNS1Q8NEH6 495 aa14.29□□□□□ -0.12
COL20A1-201ENST00000358894 SEC62Q99442 399 aaKnown RBP14.29□□□□□ -0.12
COL20A1-201ENST00000358894 ZSCAN16Q9H4T2 348 aaPredicted RBP14.29□□□□□ -0.12
COL20A1-201ENST00000358894 TRMT1Q9NXH9 659 aaKnown RBP14.29□□□□□ -0.12
COL20A1-201ENST00000358894 RAI14Q9P0K7 980 aa14.29□□□□□ -0.12
COL20A1-201ENST00000358894 MINDY4BA8MYZ0 360 aa14.29□□□□□ -0.12
COL20A1-201ENST00000358894 TPM1P09493 284 aa14.29□□□□□ -0.12
COL20A1-201ENST00000358894 SSH2Q76I76 1423 aa14.29□□□□□ -0.12
COL20A1-201ENST00000358894 NUTM2BA6NNL0 878 aaPredicted RBP14.29□□□□□ -0.12
COL20A1-201ENST00000358894 VGLL3A8MV65 326 aa14.29□□□□□ -0.12
COL20A1-201ENST00000358894 NUTM2EB1AL46 878 aaPredicted RBP14.29□□□□□ -0.12
COL20A1-201ENST00000358894 HSPA2P54652 639 aa14.29□□□□□ -0.12
COL20A1-201ENST00000358894 NUTM2AQ8IVF1 878 aaPredicted RBP14.29□□□□□ -0.12
COL20A1-201ENST00000358894 UBAC1Q9BSL1 405 aa14.28□□□□□ -0.12
COL20A1-201ENST00000358894 NCOA5Q9HCD5 579 aaKnown RBP14.28□□□□□ -0.12
COL20A1-201ENST00000358894 CD163L1Q9NR16 1453 aa14.28□□□□□ -0.12
COL20A1-201ENST00000358894 PTPDC1A2A3K4 754 aa14.28□□□□□ -0.12
COL20A1-201ENST00000358894 CUL4AQ13619 759 aa14.28□□□□□ -0.12
COL20A1-201ENST00000358894 RGS12O14924 1447 aa14.28□□□□□ -0.12
COL20A1-201ENST00000358894 ATP2B3Q16720 1220 aa14.28□□□□□ -0.12
COL20A1-201ENST00000358894 DHX32Q7L7V1 743 aaKnown RBP14.28□□□□□ -0.12
COL20A1-201ENST00000358894 ARHGEF25Q86VW2 580 aa14.28□□□□□ -0.12
COL20A1-201ENST00000358894 FAM89AQ96GI7 184 aa14.28□□□□□ -0.12
COL20A1-201ENST00000358894 TPCN1Q9ULQ1 816 aa14.28□□□□□ -0.12
COL20A1-201ENST00000358894 KDRP35968 1356 aa14.28□□□□□ -0.12
COL20A1-201ENST00000358894 MARCH6O60337 910 aa14.27□□□□□ -0.12
COL20A1-201ENST00000358894 PI4K2BQ8TCG2 481 aa14.27□□□□□ -0.12
COL20A1-201ENST00000358894 PPP1R9BQ96SB3 815 aa14.27□□□□□ -0.12
COL20A1-201ENST00000358894 RAD21O60216 631 aa14.27□□□□□ -0.12
COL20A1-201ENST00000358894 COL3A1P02461 1466 aaPredicted RBP14.27□□□□□ -0.13
COL20A1-201ENST00000358894 A0A1B0GUL7 405 aa14.27□□□□□ -0.13
COL20A1-201ENST00000358894 NCOA7Q8NI08 942 aa14.27□□□□□ -0.13
COL20A1-201ENST00000358894 IFIT3O14879 490 aaKnown RBP14.26□□□□□ -0.13
COL20A1-201ENST00000358894 CFAP100Q494V2 611 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 TTLL5Q6EMB2 1281 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 HELBQ8NG08 1087 aaPredicted RBP14.26□□□□□ -0.13
COL20A1-201ENST00000358894 NOL10Q9BSC4 688 aaKnown RBP14.26□□□□□ -0.13
COL20A1-201ENST00000358894 BRMS1Q9HCU9 246 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 IGHMBP2P38935 993 aaKnown RBP14.26□□□□□ -0.13
COL20A1-201ENST00000358894 PLBD2Q8NHP8 589 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 MTMR6Q9Y217 621 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 CTAGE5O15320 804 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 LARGE1O95461 756 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 TNNT1P13805 278 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 STX1AQ16623 288 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 SLC9C2Q5TAH2 1124 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 PTGS1P23219 599 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 AMOTL1Q8IY63 956 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 TM6SF1Q9BZW5 370 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 ZDHHC9Q9Y397 364 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 CRB1P82279 1406 aa14.26□□□□□ -0.13
COL20A1-201ENST00000358894 GOLGA8AA7E2F4 631 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 RNF113AO15541 343 aaKnown RBP14.25□□□□□ -0.13
COL20A1-201ENST00000358894 SLC3A2P08195 630 aaKnown RBP14.25□□□□□ -0.13
COL20A1-201ENST00000358894 GPS2Q13227 327 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 TSR1Q2NL82 804 aaKnown RBP14.25□□□□□ -0.13
COL20A1-201ENST00000358894 IQSEC3Q9UPP2 1182 aaPredicted RBP14.25□□□□□ -0.13
COL20A1-201ENST00000358894 ATP10DQ9P241 1426 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 NEURL4Q96JN8 1562 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 PRC1O43663 620 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 RXRAP19793 462 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 MAP3K12Q12852 859 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 POLA2Q14181 598 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 ZSWIM6Q9HCJ5 1215 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 GNL3LQ9NVN8 582 aaKnown RBP14.25□□□□□ -0.13
COL20A1-201ENST00000358894 G3V3G9 751 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 EPB41L2O43491 1005 aaKnown RBP14.25□□□□□ -0.13
COL20A1-201ENST00000358894 PHKG2P15735 406 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 ANKRD20A12PQ8NF67 263 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 TSC1Q92574 1164 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 PCMTD1Q96MG8 357 aaPredicted RBP14.25□□□□□ -0.13
COL20A1-201ENST00000358894 SLC12A7Q9Y666 1083 aa14.25□□□□□ -0.13
COL20A1-201ENST00000358894 ARHGEF28Q8N1W1 1705 aaKnown RBP14.25□□□□□ -0.13
COL20A1-201ENST00000358894 EYA2O00167 538 aa14.24□□□□□ -0.13
COL20A1-201ENST00000358894 ADAMTS2O95450 1211 aa14.24□□□□□ -0.13
COL20A1-201ENST00000358894 METAP2P50579 478 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL20A1-201ENST00000358894 ERBB4Q15303 1308 aa14.24□□□□□ -0.13
COL20A1-201ENST00000358894 IL2RBP14784 551 aa14.24□□□□□ -0.13
COL20A1-201ENST00000358894 SFPQP23246 707 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL20A1-201ENST00000358894 MARCKSP29966 332 aaPredicted RBP14.24□□□□□ -0.13
COL20A1-201ENST00000358894 PTPN14Q15678 1187 aa14.24□□□□□ -0.13
COL20A1-201ENST00000358894 OTUD7BQ6GQQ9 843 aa14.24□□□□□ -0.13
COL20A1-201ENST00000358894 KBTBD3Q8NAB2 608 aa14.24□□□□□ -0.13
COL20A1-201ENST00000358894 CLTCQ00610 1675 aaKnown RBP14.24□□□□□ -0.13
COL20A1-201ENST00000358894 TMEM67Q5HYA8 995 aa14.24□□□□□ -0.13
COL20A1-201ENST00000358894 IARSP41252 1262 aaKnown RBP14.23□□□□□ -0.13
COL20A1-201ENST00000358894 TTLL7Q6ZT98 887 aa14.23□□□□□ -0.13
COL20A1-201ENST00000358894 SASH1O94885 1247 aa14.23□□□□□ -0.13
COL20A1-201ENST00000358894 ZNF589Q86UQ0 364 aaPredicted RBP14.23□□□□□ -0.13
COL20A1-201ENST00000358894 DBNLQ9UJU6 430 aaKnown RBP14.23□□□□□ -0.13
COL20A1-201ENST00000358894 LIG1P18858 919 aa14.23□□□□□ -0.13
COL20A1-201ENST00000358894 ATP5JP18859 108 aa14.23□□□□□ -0.13
COL20A1-201ENST00000358894 LEO1Q8WVC0 666 aaPredicted RBP14.23□□□□□ -0.13
COL20A1-201ENST00000358894 ZFYP08048 801 aaPredicted RBP14.23□□□□□ -0.13
COL20A1-201ENST00000358894 TTC6Q86TZ1 520 aa14.23□□□□□ -0.13
COL20A1-201ENST00000358894 MAP2P11137 1827 aaKnown RBP14.22□□□□□ -0.13
COL20A1-201ENST00000358894 EXOC5O00471 708 aa14.22□□□□□ -0.13
COL20A1-201ENST00000358894 CCDC94Q9BW85 323 aaPredicted RBP14.22□□□□□ -0.13
COL20A1-201ENST00000358894 SLC26A6Q9BXS9 759 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms