RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 FAM227BQ96M60 508 aa16.89■□□□□ 0.29
SLC6A20-202ENST00000358525 METTL22Q9BUU2 404 aaPredicted RBP16.89■□□□□ 0.29
SLC6A20-202ENST00000358525 KIF24Q5T7B8 1368 aa16.89■□□□□ 0.29
SLC6A20-202ENST00000358525 DHX32Q7L7V1 743 aaKnown RBP16.89■□□□□ 0.29
SLC6A20-202ENST00000358525 HELBQ8NG08 1087 aaPredicted RBP16.89■□□□□ 0.29
SLC6A20-202ENST00000358525 SUCLG2Q96I99 432 aa16.89■□□□□ 0.29
SLC6A20-202ENST00000358525 ZFYVE16Q7Z3T8 1539 aa16.88■□□□□ 0.29
SLC6A20-202ENST00000358525 LTKP29376 864 aa16.88■□□□□ 0.29
SLC6A20-202ENST00000358525 NOLC1Q14978 699 aaKnown RBP eCLIP16.88■□□□□ 0.29
SLC6A20-202ENST00000358525 CRACR2BQ8N4Y2 399 aaPredicted RBP16.88■□□□□ 0.29
SLC6A20-202ENST00000358525 PDE4BQ07343 736 aa16.88■□□□□ 0.29
SLC6A20-202ENST00000358525 SIRT1Q96EB6 747 aa16.88■□□□□ 0.29
SLC6A20-202ENST00000358525 SLC27A2O14975 620 aa16.88■□□□□ 0.29
SLC6A20-202ENST00000358525 KIF5CO60282 957 aa16.88■□□□□ 0.29
SLC6A20-202ENST00000358525 TMCO3Q6UWJ1 677 aa16.88■□□□□ 0.29
SLC6A20-202ENST00000358525 AEBP2Q6ZN18 517 aaPredicted RBP16.88■□□□□ 0.29
SLC6A20-202ENST00000358525 ZNF397Q8NF99 534 aaPredicted RBP16.88■□□□□ 0.29
SLC6A20-202ENST00000358525 NUP88Q99567 741 aaPredicted RBP16.88■□□□□ 0.29
SLC6A20-202ENST00000358525 PPP1R1BQ9UD71 204 aaPredicted RBP16.88■□□□□ 0.29
SLC6A20-202ENST00000358525 EIF4A1P60842 406 aaKnown RBP16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 TIMM10P62072 90 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 TNNI3KQ59H18 835 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 KAT14Q9H8E8 782 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 FPGT-TNNI3KV9GXZ4 949 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 RTL1A6NKG5 1358 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 EIF3JO75822 258 aaKnown RBP16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 DTNBO60941 627 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 RTN1Q16799 776 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 DZIP3Q86Y13 1208 aaKnown RBP16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 RBSNQ9H1K0 784 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 KIF5BP33176 963 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 FAM193AP78312 1265 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 CCDC96Q2M329 555 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 AOPEPQ8N6M6 819 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 DBNDD2Q9BQY9 259 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 MYO6Q9UM54 1294 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 ZCCHC11Q5TAX3 1644 aaKnown RBP16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 BCORL1Q5H9F3 1711 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 RPS6KB1P23443 525 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 ANKRD18AQ8IVF6 992 aa16.87■□□□□ 0.29
SLC6A20-202ENST00000358525 CFAP74Q9C0B2 1584 aa16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 CDC42BPAQ5VT25 1732 aa16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 IRS4O14654 1257 aaPredicted RBP16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 KIF4BQ2VIQ3 1234 aa16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 CNNM2Q9H8M5 875 aa16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 FAM135BQ49AJ0 1406 aa16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 PCDH11XQ9BZA7 1347 aa16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 PCDH11YQ9BZA8 1340 aa16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 SNW1Q13573 536 aaKnown RBP16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 HSP90AA4PQ58FG1 418 aa16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 CCDC148Q8NFR7 591 aa16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 VAT1LQ9HCJ6 419 aa16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 SEPT11Q9NVA2 429 aaKnown RBP16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 NIP7Q9Y221 180 aaKnown RBP eCLIP16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 FKBP15Q5T1M5 1219 aa16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 PRDM10Q9NQV6 1147 aa16.86■□□□□ 0.29
SLC6A20-202ENST00000358525 METP08581 1390 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 CEP135Q66GS9 1140 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 IL17REQ8NFR9 667 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 PLBD2Q8NHP8 589 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 CRNKL1Q9BZJ0 848 aaKnown RBP16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 NBPF5PQ86XG9 351 aaPredicted RBP16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 ESR2Q92731 530 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 C6orf229H3BNL8 230 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 SPTLC2O15270 562 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 TMEM132AQ24JP5 1023 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 KCNQ3O43525 872 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 IQCEQ6IPM2 695 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 CCDC102AQ96A19 550 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 SLC52A2Q9HAB3 445 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 NDUFB9Q9Y6M9 179 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 KIF1BO60333 1816 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 SHROOM2Q13796 1616 aa16.85■□□□□ 0.29
SLC6A20-202ENST00000358525 RXRAP19793 462 aa16.84■□□□□ 0.29
SLC6A20-202ENST00000358525 IFIT1BQ5T764 474 aaKnown RBP16.84■□□□□ 0.29
SLC6A20-202ENST00000358525 KANK3Q6NY19 840 aa16.84■□□□□ 0.29
SLC6A20-202ENST00000358525 CCDC150Q8NCX0 1101 aa16.84■□□□□ 0.29
SLC6A20-202ENST00000358525 UTP14AQ9BVJ6 771 aaKnown RBP16.84■□□□□ 0.29
SLC6A20-202ENST00000358525 SPA17Q15506 151 aa16.84■□□□□ 0.29
SLC6A20-202ENST00000358525 FAM89AQ96GI7 184 aa16.84■□□□□ 0.29
SLC6A20-202ENST00000358525 PRIMPOLQ96LW4 560 aa16.84■□□□□ 0.29
SLC6A20-202ENST00000358525 USP44Q9H0E7 712 aa16.84■□□□□ 0.29
SLC6A20-202ENST00000358525 PRM3Q9NNZ6 103 aa16.84■□□□□ 0.29
SLC6A20-202ENST00000358525 UBASH3AP57075 661 aa16.84■□□□□ 0.29
SLC6A20-202ENST00000358525 TMEM266Q2M3C6 531 aa16.84■□□□□ 0.29
SLC6A20-202ENST00000358525 HELLSQ9NRZ9 838 aa16.84■□□□□ 0.29
SLC6A20-202ENST00000358525 A0A1B0GUL7 405 aa16.83■□□□□ 0.29
SLC6A20-202ENST00000358525 BAG3O95817 575 aa16.83■□□□□ 0.29
SLC6A20-202ENST00000358525 SKILP12757 684 aa16.83■□□□□ 0.29
SLC6A20-202ENST00000358525 AFMP43652 599 aa16.83■□□□□ 0.29
SLC6A20-202ENST00000358525 MAGEB6Q8N7X4 407 aa16.83■□□□□ 0.29
SLC6A20-202ENST00000358525 PDCL3Q9H2J4 239 aa16.83■□□□□ 0.29
SLC6A20-202ENST00000358525 DYNC1I1O14576 645 aa16.83■□□□□ 0.29
SLC6A20-202ENST00000358525 MIGA1Q8NAN2 632 aa16.83■□□□□ 0.29
SLC6A20-202ENST00000358525 CGNQ9P2M7 1197 aaKnown RBP16.83■□□□□ 0.29
SLC6A20-202ENST00000358525 TMTC2Q8N394 836 aa16.83■□□□□ 0.28
SLC6A20-202ENST00000358525 ZNF594Q96JF6 807 aaPredicted RBP16.83■□□□□ 0.28
SLC6A20-202ENST00000358525 EYA2O00167 538 aa16.83■□□□□ 0.28
SLC6A20-202ENST00000358525 RAB34Q9BZG1 259 aa16.83■□□□□ 0.28
SLC6A20-202ENST00000358525 LDHCP07864 332 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms