RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 USP27XA6NNY8 438 aa9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 HIP1O00291 1037 aa9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 CYP2C19P33261 490 aa9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 CEP135Q66GS9 1140 aa9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 KSR2Q6VAB6 950 aa9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 NRKQ7Z2Y5 1582 aa9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 DHX16O60231 1041 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 SKILP12757 684 aa9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 ME1P48163 572 aa9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 C11orf57Q6ZUT1 292 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 DDX46Q7L014 1031 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 CHST3Q7LGC8 479 aa9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 NEK1Q96PY6 1258 aa9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 MYCBPQ99417 103 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 TMX1Q9H3N1 280 aa9.64□□□□□ -0.87
CDC42SE1-201ENST00000357235 ADAMTSL3P82987 1691 aa9.63□□□□□ -0.87
CDC42SE1-201ENST00000357235 NOP2P46087 812 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-201ENST00000357235 SLC39A6Q13433 755 aa9.63□□□□□ -0.87
CDC42SE1-201ENST00000357235 ZRSR1Q15695 479 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-201ENST00000357235 SLFNL1Q499Z3 407 aa9.63□□□□□ -0.87
CDC42SE1-201ENST00000357235 ZNF397Q8NF99 534 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-201ENST00000357235 ELP1O95163 1332 aa9.63□□□□□ -0.87
CDC42SE1-201ENST00000357235 PTPN14Q15678 1187 aa9.63□□□□□ -0.87
CDC42SE1-201ENST00000357235 CCDC73Q6ZRK6 1079 aa9.63□□□□□ -0.87
CDC42SE1-201ENST00000357235 CCAR1Q8IX12 1150 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-201ENST00000357235 TECPR2O15040 1411 aa9.62□□□□□ -0.87
CDC42SE1-201ENST00000357235 NRXN3Q9Y4C0 1643 aa9.62□□□□□ -0.87
CDC42SE1-201ENST00000357235 KINO60870 393 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-201ENST00000357235 ICE2Q659A1 982 aa9.62□□□□□ -0.87
CDC42SE1-201ENST00000357235 SDF4Q9BRK5 362 aa9.62□□□□□ -0.87
CDC42SE1-201ENST00000357235 NCOA5Q9HCD5 579 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-201ENST00000357235 CFAP45Q9UL16 551 aa9.62□□□□□ -0.87
CDC42SE1-201ENST00000357235 DDX58O95786 925 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-201ENST00000357235 PLA2G4DQ86XP0 818 aa9.62□□□□□ -0.87
CDC42SE1-201ENST00000357235 TAF5LO75529 589 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 PRR29P0C7W0 189 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 PSME1Q06323 249 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 NEXNQ0ZGT2 675 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 LRRC8AQ8IWT6 810 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 NEUROD6Q96NK8 337 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 MYD88Q99836 296 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 NCAPGQ9BPX3 1015 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 BABAM1Q9NWV8 329 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 ZNF215Q9UL58 517 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 ADAMTS13Q76LX8 1427 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 USP42Q9H9J4 1324 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 CCDC69A6NI79 296 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 BIN1O00499 593 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 GIGYF1O75420 1035 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 KCNA6P17658 529 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 APOBRQ0VD83 1088 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 KMT5BQ4FZB7 885 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 PLEKHO1Q53GL0 409 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 ISM2Q6H9L7 571 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 AOPEPQ8N6M6 819 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 LINS1Q8NG48 757 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 TDRD7Q8NHU6 1098 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 GTF3C6Q969F1 213 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 KAZALD1Q96I82 304 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 ST7Q9NRC1 585 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 PAXBP1Q9Y5B6 917 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 PATL2C9JE40 543 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 ALDH1L1O75891 902 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 SMC2O95347 1197 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 SCRN1Q12765 414 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 SF3A1Q15459 793 aaKnown RBP9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 GORABQ5T7V8 394 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 RAB11FIP4Q86YS3 637 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 BANK1Q8NDB2 785 aa9.61□□□□□ -0.87
CDC42SE1-201ENST00000357235 SPATA31D1Q6ZQQ2 1576 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 SETD1AO15047 1707 aaKnown RBP9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 AKAP12Q02952 1782 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 MTX1Q13505 466 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 C10orf67Q8IYJ2 551 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 FSIP1Q8NA03 581 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 PXDNLA1KZ92 1463 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 XRN1Q8IZH2 1706 aaKnown RBP9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 PTPRUQ92729 1446 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 ATP5J2-PTCD1G3V325 749 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 PTCD1O75127 700 aaKnown RBP9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 CYP21A2P08686 494 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 TFCP2Q12800 502 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 RESTQ13127 1097 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 ELF2Q15723 593 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 STX1AQ16623 288 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 ESCO1Q5FWF5 840 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 AKAP4Q5JQC9 854 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 EPHA10Q5JZY3 1008 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 KCNB2Q92953 911 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 USP28Q96RU2 1077 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 FAM53CQ9NYF3 392 aa9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.6□□□□□ -0.87
CDC42SE1-201ENST00000357235 A0A1B0GVL5 298 aa9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 POLR3DP05423 398 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 CASQ1P31415 396 aa9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 KRT32Q14532 448 aa9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 OTUD7BQ6GQQ9 843 aa9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 UBE3BQ7Z3V4 1068 aa9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 GOLPH3LQ9H4A5 285 aa9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 HMG20BQ9P0W2 317 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms