RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 GPS2Q13227 327 aa17.14■□□□□ 0.33
TOP3B-201ENST00000357179 ZSCAN26Q16670 478 aa17.14■□□□□ 0.33
TOP3B-201ENST00000357179 CREB3L3Q68CJ9 461 aa17.14■□□□□ 0.33
TOP3B-201ENST00000357179 DBF4Q9UBU7 674 aaPredicted RBP17.14■□□□□ 0.33
TOP3B-201ENST00000357179 RBM8AQ9Y5S9 174 aaKnown RBP17.14■□□□□ 0.33
TOP3B-201ENST00000357179 TUBB4AP04350 444 aa17.14■□□□□ 0.33
TOP3B-201ENST00000357179 CASQ1P31415 396 aa17.14■□□□□ 0.33
TOP3B-201ENST00000357179 GSDMDP57764 484 aa17.14■□□□□ 0.33
TOP3B-201ENST00000357179 E4F1Q66K89 784 aaPredicted RBP17.14■□□□□ 0.33
TOP3B-201ENST00000357179 ZFP91Q96JP5 570 aaPredicted RBP17.14■□□□□ 0.33
TOP3B-201ENST00000357179 ATG3Q9NT62 314 aa17.14■□□□□ 0.33
TOP3B-201ENST00000357179 ORC3Q9UBD5 711 aaPredicted RBP17.14■□□□□ 0.33
TOP3B-201ENST00000357179 C11orf57Q6ZUT1 292 aaPredicted RBP17.13■□□□□ 0.33
TOP3B-201ENST00000357179 ABTB2Q8N961 1025 aa17.13■□□□□ 0.33
TOP3B-201ENST00000357179 IP6K1Q92551 441 aa17.13■□□□□ 0.33
TOP3B-201ENST00000357179 LTV1Q96GA3 475 aaPredicted RBP17.13■□□□□ 0.33
TOP3B-201ENST00000357179 PGBD1Q96JS3 809 aa17.13■□□□□ 0.33
TOP3B-201ENST00000357179 NECAB1Q8N987 351 aa17.13■□□□□ 0.33
TOP3B-201ENST00000357179 PPP1R13BQ96KQ4 1090 aa17.13■□□□□ 0.33
TOP3B-201ENST00000357179 TPCN1Q9ULQ1 816 aa17.13■□□□□ 0.33
TOP3B-201ENST00000357179 TRIM66O15016 1216 aa17.12■□□□□ 0.33
TOP3B-201ENST00000357179 OSBPL5Q9H0X9 879 aaPredicted RBP17.12■□□□□ 0.33
TOP3B-201ENST00000357179 TFIP11Q9UBB9 837 aaKnown RBP17.12■□□□□ 0.33
TOP3B-201ENST00000357179 LCMT1Q9UIC8 334 aa17.12■□□□□ 0.33
TOP3B-201ENST00000357179 OVOS2A0A0G2JMS6 1433 aa17.12■□□□□ 0.33
TOP3B-201ENST00000357179 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.12■□□□□ 0.33
TOP3B-201ENST00000357179 PSDA5PKW4 1024 aaPredicted RBP17.12■□□□□ 0.33
TOP3B-201ENST00000357179 C10orf67Q8IYJ2 551 aa17.12■□□□□ 0.33
TOP3B-201ENST00000357179 CCDC191Q8NCU4 936 aa17.12■□□□□ 0.33
TOP3B-201ENST00000357179 BICD2Q8TD16 824 aa17.12■□□□□ 0.33
TOP3B-201ENST00000357179 LGR6Q9HBX8 967 aa17.12■□□□□ 0.33
TOP3B-201ENST00000357179 CWC15Q9P013 229 aaKnown RBP17.12■□□□□ 0.33
TOP3B-201ENST00000357179 LTN1O94822 1766 aa17.12■□□□□ 0.33
TOP3B-201ENST00000357179 AKAP4Q5JQC9 854 aa17.11■□□□□ 0.33
TOP3B-201ENST00000357179 ZBTB9Q96C00 473 aa17.11■□□□□ 0.33
TOP3B-201ENST00000357179 C9orf78Q9NZ63 289 aaPredicted RBP17.11■□□□□ 0.33
TOP3B-201ENST00000357179 NCAPD2Q15021 1401 aa17.11■□□□□ 0.33
TOP3B-201ENST00000357179 KCNJ6P48051 423 aa17.11■□□□□ 0.33
TOP3B-201ENST00000357179 STX1AQ16623 288 aa17.11■□□□□ 0.33
TOP3B-201ENST00000357179 UBXN4Q92575 508 aa17.11■□□□□ 0.33
TOP3B-201ENST00000357179 SLC27A2O14975 620 aa17.11■□□□□ 0.33
TOP3B-201ENST00000357179 KSR2Q6VAB6 950 aa17.11■□□□□ 0.33
TOP3B-201ENST00000357179 USHBP1Q8N6Y0 703 aa17.11■□□□□ 0.33
TOP3B-201ENST00000357179 UTYO14607 1347 aa17.1■□□□□ 0.33
TOP3B-201ENST00000357179 JCADQ9P266 1359 aa17.1■□□□□ 0.33
TOP3B-201ENST00000357179 BTBD11A6QL63 1104 aa17.1■□□□□ 0.33
TOP3B-201ENST00000357179 OAS2P29728 719 aaKnown RBP17.1■□□□□ 0.33
TOP3B-201ENST00000357179 TEFQ10587 303 aa17.1■□□□□ 0.33
TOP3B-201ENST00000357179 TSGA10IPQ3SY00 556 aa17.1■□□□□ 0.33
TOP3B-201ENST00000357179 AACSQ86V21 672 aa17.1■□□□□ 0.33
TOP3B-201ENST00000357179 IMPACTQ9P2X3 320 aa17.1■□□□□ 0.33
TOP3B-201ENST00000357179 NUTM2GQ5VZR2 741 aa17.1■□□□□ 0.33
TOP3B-201ENST00000357179 SRLQ86TD4 932 aa17.1■□□□□ 0.33
TOP3B-201ENST00000357179 DHX40Q8IX18 779 aaKnown RBP17.1■□□□□ 0.33
TOP3B-201ENST00000357179 FBXO18Q8NFZ0 1043 aa17.1■□□□□ 0.33
TOP3B-201ENST00000357179 GOLGA5Q8TBA6 731 aa17.1■□□□□ 0.33
TOP3B-201ENST00000357179 NFAT5O94916 1531 aa17.09■□□□□ 0.33
TOP3B-201ENST00000357179 PHRF1Q9P1Y6 1649 aaKnown RBP17.09■□□□□ 0.33
TOP3B-201ENST00000357179 BECN2A8MW95 431 aa17.09■□□□□ 0.33
TOP3B-201ENST00000357179 NMIQ13287 307 aaPredicted RBP17.09■□□□□ 0.33
TOP3B-201ENST00000357179 BLOC1S2Q6QNY1 142 aa17.09■□□□□ 0.33
TOP3B-201ENST00000357179 HMG20BQ9P0W2 317 aa17.09■□□□□ 0.33
TOP3B-201ENST00000357179 MAP3K2Q9Y2U5 619 aa17.09■□□□□ 0.33
TOP3B-201ENST00000357179 HEG1Q9ULI3 1381 aa17.09■□□□□ 0.33
TOP3B-201ENST00000357179 KCNQ3O43525 872 aa17.09■□□□□ 0.33
TOP3B-201ENST00000357179 GIGYF1O75420 1035 aaPredicted RBP17.09■□□□□ 0.33
TOP3B-201ENST00000357179 TBC1D8O95759 1140 aa17.09■□□□□ 0.33
TOP3B-201ENST00000357179 ICE2Q659A1 982 aa17.09■□□□□ 0.33
TOP3B-201ENST00000357179 ZCCHC17Q9NP64 241 aaKnown RBP17.09■□□□□ 0.33
TOP3B-201ENST00000357179 PSD3Q9NYI0 1048 aa17.09■□□□□ 0.33
TOP3B-201ENST00000357179 MED23Q9ULK4 1368 aa17.09■□□□□ 0.33
TOP3B-201ENST00000357179 NPHP4O75161 1426 aaPredicted RBP17.09■□□□□ 0.33
TOP3B-201ENST00000357179 SASH3O75995 380 aa17.08■□□□□ 0.33
TOP3B-201ENST00000357179 RPS6KB1P23443 525 aa17.08■□□□□ 0.33
TOP3B-201ENST00000357179 NBPF6Q5VWK0 638 aa17.08■□□□□ 0.33
TOP3B-201ENST00000357179 NBPF11Q86T75 865 aa17.08■□□□□ 0.33
TOP3B-201ENST00000357179 REXO1L1PQ8IX06 675 aa17.08■□□□□ 0.33
TOP3B-201ENST00000357179 NBPF4Q96M43 638 aa17.08■□□□□ 0.33
TOP3B-201ENST00000357179 CTAGE5O15320 804 aa17.08■□□□□ 0.32
TOP3B-201ENST00000357179 TADA3O75528 432 aa17.08■□□□□ 0.32
TOP3B-201ENST00000357179 SEC31AO94979 1220 aaKnown RBP17.08■□□□□ 0.32
TOP3B-201ENST00000357179 GTF2A1P52655 376 aaPredicted RBP17.08■□□□□ 0.32
TOP3B-201ENST00000357179 IQUBQ8NA54 791 aa17.08■□□□□ 0.32
TOP3B-201ENST00000357179 FAM227BQ96M60 508 aa17.08■□□□□ 0.32
TOP3B-201ENST00000357179 SRRTQ9BXP5 876 aaKnown RBP17.08■□□□□ 0.32
TOP3B-201ENST00000357179 PA2G4Q9UQ80 394 aaKnown RBP17.08■□□□□ 0.32
TOP3B-201ENST00000357179 PHLPP2Q6ZVD8 1323 aa17.07■□□□□ 0.32
TOP3B-201ENST00000357179 TPM1P09493 284 aa17.07■□□□□ 0.32
TOP3B-201ENST00000357179 SMC1AQ14683 1233 aaKnown RBP17.07■□□□□ 0.32
TOP3B-201ENST00000357179 LINS1Q8NG48 757 aa17.07■□□□□ 0.32
TOP3B-201ENST00000357179 SASH1O94885 1247 aa17.07■□□□□ 0.32
TOP3B-201ENST00000357179 AMOTQ4VCS5 1084 aa17.07■□□□□ 0.32
TOP3B-201ENST00000357179 PLEKHO1Q53GL0 409 aaPredicted RBP17.07■□□□□ 0.32
TOP3B-201ENST00000357179 CCDC158Q5M9N0 1113 aa17.07■□□□□ 0.32
TOP3B-201ENST00000357179 EXOC4Q96A65 974 aa17.07■□□□□ 0.32
TOP3B-201ENST00000357179 MRC1P22897 1456 aa17.07■□□□□ 0.32
TOP3B-201ENST00000357179 ANXA1P04083 346 aa17.07■□□□□ 0.32
TOP3B-201ENST00000357179 GYS2P54840 703 aa17.07■□□□□ 0.32
TOP3B-201ENST00000357179 ETF1P62495 437 aaKnown RBP17.07■□□□□ 0.32
TOP3B-201ENST00000357179 G3BP1Q13283 466 aaKnown RBP eCLIP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms