RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 ARHGAP29Q52LW3 1261 aa20.7■□□□□ 0.9
KDM1A-201ENST00000356634 SIRT1Q96EB6 747 aa20.7■□□□□ 0.9
KDM1A-201ENST00000356634 NAT10Q9H0A0 1025 aaKnown RBP20.7■□□□□ 0.9
KDM1A-201ENST00000356634 BICC1Q9H694 974 aaKnown RBP20.7■□□□□ 0.9
KDM1A-201ENST00000356634 BIN1O00499 593 aa20.7■□□□□ 0.9
KDM1A-201ENST00000356634 IRX5P78411 483 aaPredicted RBP20.7■□□□□ 0.9
KDM1A-201ENST00000356634 BMS1Q14692 1282 aaKnown RBP20.7■□□□□ 0.9
KDM1A-201ENST00000356634 PROSER3Q2NL68 480 aa20.7■□□□□ 0.9
KDM1A-201ENST00000356634 NPHP4O75161 1426 aaPredicted RBP20.7■□□□□ 0.9
KDM1A-201ENST00000356634 ADAMTS13Q76LX8 1427 aa20.7■□□□□ 0.9
KDM1A-201ENST00000356634 CACNA1FO60840 1977 aa20.7■□□□□ 0.9
KDM1A-201ENST00000356634 SCRN1Q12765 414 aa20.7■□□□□ 0.9
KDM1A-201ENST00000356634 SUCLG2Q96I99 432 aa20.7■□□□□ 0.9
KDM1A-201ENST00000356634 DNAJC2Q99543 621 aaKnown RBP20.7■□□□□ 0.9
KDM1A-201ENST00000356634 POLR3GO15318 223 aaPredicted RBP20.69■□□□□ 0.9
KDM1A-201ENST00000356634 TAF5LO75529 589 aa20.69■□□□□ 0.9
KDM1A-201ENST00000356634 GSDMDP57764 484 aa20.69■□□□□ 0.9
KDM1A-201ENST00000356634 SFPQP23246 707 aaKnown RBP eCLIP20.69■□□□□ 0.9
KDM1A-201ENST00000356634 MTX1Q13505 466 aa20.69■□□□□ 0.9
KDM1A-201ENST00000356634 MPRIPQ6WCQ1 1025 aa20.69■□□□□ 0.9
KDM1A-201ENST00000356634 IFNKQ9P0W0 207 aa20.69■□□□□ 0.9
KDM1A-201ENST00000356634 KIF2AO00139 706 aaPredicted RBP20.68■□□□□ 0.9
KDM1A-201ENST00000356634 KRT32Q14532 448 aa20.68■□□□□ 0.9
KDM1A-201ENST00000356634 LRRC59Q96AG4 307 aaKnown RBP20.68■□□□□ 0.9
KDM1A-201ENST00000356634 SEC62Q99442 399 aaKnown RBP20.68■□□□□ 0.9
KDM1A-201ENST00000356634 DBF4Q9UBU7 674 aaPredicted RBP20.68■□□□□ 0.9
KDM1A-201ENST00000356634 NRXN3Q9Y4C0 1643 aa20.68■□□□□ 0.9
KDM1A-201ENST00000356634 A0A1B0GVL5 298 aa20.68■□□□□ 0.9
KDM1A-201ENST00000356634 FAM160A1Q05DH4 1040 aa20.68■□□□□ 0.9
KDM1A-201ENST00000356634 E4F1Q66K89 784 aaPredicted RBP20.68■□□□□ 0.9
KDM1A-201ENST00000356634 PPP1R13BQ96KQ4 1090 aa20.68■□□□□ 0.9
KDM1A-201ENST00000356634 BABAM1Q9NWV8 329 aa20.68■□□□□ 0.9
KDM1A-201ENST00000356634 ERBB3P21860 1342 aa20.68■□□□□ 0.9
KDM1A-201ENST00000356634 NRDCO43847 1150 aa20.67■□□□□ 0.9
KDM1A-201ENST00000356634 CLCN6P51797 869 aa20.67■□□□□ 0.9
KDM1A-201ENST00000356634 SF3A1Q15459 793 aaKnown RBP20.67■□□□□ 0.9
KDM1A-201ENST00000356634 XPO4Q9C0E2 1151 aaKnown RBP20.67■□□□□ 0.9
KDM1A-201ENST00000356634 NCOA5Q9HCD5 579 aaKnown RBP20.67■□□□□ 0.9
KDM1A-201ENST00000356634 CALCOCO1Q9P1Z2 691 aa20.67■□□□□ 0.9
KDM1A-201ENST00000356634 GIGYF1O75420 1035 aaPredicted RBP20.67■□□□□ 0.9
KDM1A-201ENST00000356634 ADGRL3Q9HAR2 1447 aa20.67■□□□□ 0.9
KDM1A-201ENST00000356634 ISM2Q6H9L7 571 aa20.67■□□□□ 0.9
KDM1A-201ENST00000356634 DNAI1Q9UI46 699 aa20.67■□□□□ 0.9
KDM1A-201ENST00000356634 PTPDC1A2A3K4 754 aa20.66■□□□□ 0.9
KDM1A-201ENST00000356634 APOBRQ0VD83 1088 aa20.66■□□□□ 0.9
KDM1A-201ENST00000356634 SLFNL1Q499Z3 407 aa20.66■□□□□ 0.9
KDM1A-201ENST00000356634 FAM177A1Q8N128 213 aaPredicted RBP20.66■□□□□ 0.9
KDM1A-201ENST00000356634 RCOR1Q9UKL0 485 aa20.66■□□□□ 0.9
KDM1A-201ENST00000356634 HDAC5Q9UQL6 1122 aa20.66■□□□□ 0.9
KDM1A-201ENST00000356634 GRM8O00222 908 aa20.65■□□□□ 0.9
KDM1A-201ENST00000356634 DPCR1Q3MIW9 517 aa20.65■□□□□ 0.9
KDM1A-201ENST00000356634 NBPF11Q86T75 865 aa20.65■□□□□ 0.9
KDM1A-201ENST00000356634 UBXN4Q92575 508 aa20.65■□□□□ 0.9
KDM1A-201ENST00000356634 ZNF396Q96N95 335 aaPredicted RBP20.65■□□□□ 0.9
KDM1A-201ENST00000356634 PRAMEF22A3QJZ6 481 aa20.65■□□□□ 0.9
KDM1A-201ENST00000356634 MNS1Q8NEH6 495 aa20.65■□□□□ 0.9
KDM1A-201ENST00000356634 MED23Q9ULK4 1368 aa20.65■□□□□ 0.9
KDM1A-201ENST00000356634 CYP21A2P08686 494 aa20.64■□□□□ 0.9
KDM1A-201ENST00000356634 ADD1P35611 737 aaKnown RBP20.64■□□□□ 0.9
KDM1A-201ENST00000356634 KSR2Q6VAB6 950 aa20.64■□□□□ 0.9
KDM1A-201ENST00000356634 CHST3Q7LGC8 479 aa20.64■□□□□ 0.89
KDM1A-201ENST00000356634 TECPR2O15040 1411 aa20.64■□□□□ 0.89
KDM1A-201ENST00000356634 ALDH1L1O75891 902 aa20.64■□□□□ 0.89
KDM1A-201ENST00000356634 ESCO1Q5FWF5 840 aa20.64■□□□□ 0.89
KDM1A-201ENST00000356634 ARMCX5Q6P1M9 558 aa20.64■□□□□ 0.89
KDM1A-201ENST00000356634 TMCO3Q6UWJ1 677 aa20.64■□□□□ 0.89
KDM1A-201ENST00000356634 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.64■□□□□ 0.892e-10■■■□□ 18.1
KDM1A-201ENST00000356634 CHMP4AQ9BY43 222 aa20.63■□□□□ 0.89
KDM1A-201ENST00000356634 ALDH8A1Q9H2A2 487 aaPredicted RBP20.63■□□□□ 0.89
KDM1A-201ENST00000356634 URI1O94763 535 aaPredicted RBP20.63■□□□□ 0.89
KDM1A-201ENST00000356634 PNMA6AP0CW24 399 aaPredicted RBP20.63■□□□□ 0.89
KDM1A-201ENST00000356634 LMOD1P29536 600 aaPredicted RBP20.63■□□□□ 0.89
KDM1A-201ENST00000356634 ZNF530Q6P9A1 599 aaPredicted RBP20.63■□□□□ 0.89
KDM1A-201ENST00000356634 DDX46Q7L014 1031 aaKnown RBP20.63■□□□□ 0.89
KDM1A-201ENST00000356634 NSUN7Q8NE18 718 aaKnown RBP20.63■□□□□ 0.89
KDM1A-201ENST00000356634 FHOD1Q9Y613 1164 aa20.63■□□□□ 0.89
KDM1A-201ENST00000356634 FMN2Q9NZ56 1722 aa20.62■□□□□ 0.89
KDM1A-201ENST00000356634 MRPS27Q92552 414 aaKnown RBP20.62■□□□□ 0.89
KDM1A-201ENST00000356634 ARGLU1Q9NWB6 273 aaPredicted RBP20.62■□□□□ 0.89
KDM1A-201ENST00000356634 H2AFXP16104 143 aaPredicted RBP20.62■□□□□ 0.89
KDM1A-201ENST00000356634 CCDC150Q8NCX0 1101 aa20.62■□□□□ 0.89
KDM1A-201ENST00000356634 KAZALD1Q96I82 304 aa20.62■□□□□ 0.89
KDM1A-201ENST00000356634 PCDHA7Q9UN72 937 aa20.62■□□□□ 0.89
KDM1A-201ENST00000356634 POLR3DP05423 398 aaPredicted RBP20.61■□□□□ 0.89
KDM1A-201ENST00000356634 TPM4P67936 248 aa20.61■□□□□ 0.89
KDM1A-201ENST00000356634 STK38Q15208 465 aa20.61■□□□□ 0.89
KDM1A-201ENST00000356634 PTPN21Q16825 1174 aa20.61■□□□□ 0.89
KDM1A-201ENST00000356634 OTUD7BQ6GQQ9 843 aa20.61■□□□□ 0.89
KDM1A-201ENST00000356634 ENGASEQ8NFI3 743 aa20.61■□□□□ 0.89
KDM1A-201ENST00000356634 TMX1Q9H3N1 280 aa20.61■□□□□ 0.89
KDM1A-201ENST00000356634 FAM53CQ9NYF3 392 aa20.61■□□□□ 0.89
KDM1A-201ENST00000356634 CRYBG1Q9Y4K1 1723 aa20.61■□□□□ 0.89
KDM1A-201ENST00000356634 NDUFA8P51970 172 aa20.61■□□□□ 0.89
KDM1A-201ENST00000356634 HNRNPH2P55795 449 aaKnown RBP20.61■□□□□ 0.89
KDM1A-201ENST00000356634 NEK11Q8NG66 645 aa20.61■□□□□ 0.89
KDM1A-201ENST00000356634 OSBPL5Q9H0X9 879 aaPredicted RBP20.61■□□□□ 0.89
KDM1A-201ENST00000356634 U3KPZ7 1027 aaPredicted RBP20.61■□□□□ 0.89
KDM1A-201ENST00000356634 SEC31AO94979 1220 aaKnown RBP20.6■□□□□ 0.89
KDM1A-201ENST00000356634 RIC3Q7Z5B4 369 aa20.6■□□□□ 0.89
KDM1A-201ENST00000356634 L2HGDHQ9H9P8 463 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms