RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 TXNDC2Q86VQ3 553 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 SSH1Q8WYL5 1049 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 RMND1Q9NWS8 449 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 PPP1R12CQ9BZL4 782 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 ODF2LQ9ULJ1 636 aa12.54□□□□□ -0.4
GTF3C1-201ENST00000356183 GNAT3A8MTJ3 354 aa12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 TMPOP42166 694 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 DAPK1P53355 1430 aa12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 F6X3S4 739 aa12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 HPDP32754 393 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 ALDH1L2Q3SY69 923 aa12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 HDXQ7Z353 690 aa12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 MICU3Q86XE3 530 aa12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 SMC5Q8IY18 1101 aa12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 IARSP41252 1262 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 GBP7Q8N8V2 638 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 STXBP4Q6ZWJ1 553 aa12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 PPFIBP2Q8ND30 876 aa12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 SMC1BQ8NDV3 1235 aa12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 ANKIB1Q9P2G1 1089 aa12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 ORC3Q9UBD5 711 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-201ENST00000356183 AFAP1L1Q8TED9 768 aa12.52□□□□□ -0.4
GTF3C1-201ENST00000356183 NUTM2BA6NNL0 878 aaPredicted RBP12.52□□□□□ -0.4
GTF3C1-201ENST00000356183 NUTM2EB1AL46 878 aaPredicted RBP12.52□□□□□ -0.4
GTF3C1-201ENST00000356183 ERCC5P28715 1186 aaPredicted RBP12.52□□□□□ -0.4
GTF3C1-201ENST00000356183 MAP3K12Q12852 859 aa12.52□□□□□ -0.4
GTF3C1-201ENST00000356183 NUTM2AQ8IVF1 878 aaPredicted RBP12.52□□□□□ -0.4
GTF3C1-201ENST00000356183 TRIM7Q9C029 511 aa12.52□□□□□ -0.4
GTF3C1-201ENST00000356183 CCDC172P0C7W6 258 aa12.52□□□□□ -0.4
GTF3C1-201ENST00000356183 UBA7P41226 1012 aa12.52□□□□□ -0.4
GTF3C1-201ENST00000356183 TTF1Q15361 905 aaPredicted RBP12.52□□□□□ -0.4
GTF3C1-201ENST00000356183 CCDC174Q6PII3 467 aa12.52□□□□□ -0.4
GTF3C1-201ENST00000356183 PLVAPQ9BX97 442 aa12.52□□□□□ -0.4
GTF3C1-201ENST00000356183 HGSO14964 777 aaPredicted RBP12.52□□□□□ -0.41
GTF3C1-201ENST00000356183 RFC1P35251 1148 aaPredicted RBP12.52□□□□□ -0.41
GTF3C1-201ENST00000356183 UAP1Q16222 522 aaPredicted RBP12.52□□□□□ -0.41
GTF3C1-201ENST00000356183 U2AF2P26368 475 aaKnown RBP eCLIP12.52□□□□□ -0.411e-6■■■□□ 17.9
GTF3C1-201ENST00000356183 PPP1R7Q15435 360 aa12.52□□□□□ -0.41
GTF3C1-201ENST00000356183 NFE2L2Q16236 605 aa12.52□□□□□ -0.41
GTF3C1-201ENST00000356183 DPH6Q7L8W6 267 aa12.52□□□□□ -0.41
GTF3C1-201ENST00000356183 LMNTD2Q8IXW0 634 aa12.52□□□□□ -0.41
GTF3C1-201ENST00000356183 EPSTI1Q96J88 318 aa12.52□□□□□ -0.41
GTF3C1-201ENST00000356183 TMOD2Q9NZR1 351 aa12.52□□□□□ -0.41
GTF3C1-201ENST00000356183 MAP3K9P80192 1104 aa12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 MKRN1Q9UHC7 482 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 SH3BP5O60239 455 aa12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 MARCKSP29966 332 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 NEK1Q96PY6 1258 aa12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 PPP1R9BQ96SB3 815 aa12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 CCDC170Q8IYT3 715 aa12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 EVI5LQ96CN4 794 aa12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 A0A1B0GUA9 196 aa12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 UBXN1Q04323 297 aa12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 TBCAO75347 108 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 SF3A3Q12874 501 aaKnown RBP eCLIP12.51□□□□□ -0.413e-6■■■■■ 29.5
GTF3C1-201ENST00000356183 MRRFQ96E11 262 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 PYM1Q9BRP8 204 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 SWAP70Q9UH65 585 aa12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 GKAP1Q5VSY0 366 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 DDX27Q96GQ7 796 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 TMX3Q96JJ7 454 aa12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 KAT14Q9H8E8 782 aa12.51□□□□□ -0.41
GTF3C1-201ENST00000356183 PPP2R3AQ06190 1150 aa12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 CACNA2D3Q8IZS8 1091 aa12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 SPAG5Q96R06 1193 aa12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.5□□□□□ -0.412e-6■■■■■ 29.4
GTF3C1-201ENST00000356183 TTC21AQ8NDW8 1320 aa12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 SLC5A1P13866 664 aa12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 LRRC2Q9BYS8 371 aa12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 TMEM87AQ8NBN3 555 aa12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 CASQ2O14958 399 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 TRIM27P14373 513 aa12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 HDAC1Q13547 482 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 PAXIP1Q6ZW49 1069 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 LRRC45Q96CN5 670 aa12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 HMGXB3Q12766 1538 aa12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 RNF41Q9H4P4 317 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 ZSCAN16Q9H4T2 348 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-201ENST00000356183 SATB1Q01826 763 aa12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 PLCB3Q01970 1234 aa12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 KIF5AQ12840 1032 aa12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 RTL1A6NKG5 1358 aa12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 KRT83P78385 493 aa12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 NEDD9Q14511 834 aa12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 CCDC65Q8IXS2 484 aa12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 ATP2A1O14983 1001 aa12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 LMOD1P29536 600 aaPredicted RBP12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 FAM200AQ8TCP9 573 aa12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 LUC7L2Q9Y383 392 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 CA8P35219 290 aa12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 PRPHP41219 470 aa12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 ZNF131P52739 623 aa12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 ARHGEF2Q92974 986 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 NSD3Q9BZ95 1437 aa12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 ZNF853P0CG23 659 aa12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 DNM1Q05193 864 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-201ENST00000356183 SYNJ2O15056 1496 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 CC2D2AQ9P2K1 1620 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 RPGRIP1LQ68CZ1 1315 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms